EY736213

Overview
NameEY736213
Unique NameEY736213
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length873
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ2_AQUAE (Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dnaJ2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.585e-18
Identity = 57/156 (36.54%), Postives = 79/156 (50.64%), Query Frame = 2
Query:  146 SNNTRYYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDPE---KFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGA----------------HDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNV 556
            S    YYEILGV +NAS E++KKAY++   K HPD    PE   KFKE+ +AY+VLSDPEKR++YD YG  A +     GAGA                 + FD                        ED+V P++++LE+ + GT+  + + R V
Sbjct:    4 STKKDYYEILGVPRNASQEEIKKAYRRLVRKYHPDICKKPECEEKFKEINEAYQVLSDPEKRKLYDMYGHAAFE-----GAGAQQRVETTEIPPIEEILREFFDFDIGSIFERATGRRRARRRRSVKGEDIVVPVEITLEEAFKGTTVPIEVEREV 154          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNJB1_MOUSE (DnaJ homolog subfamily B member 1 OS=Mus musculus GN=Dnajb1 PE=2 SV=3)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 42/79 (53.16%), Postives = 62/79 (78.48%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALKEG--MGGGAG 382
            YY+ LG+++ AS +++K+AY++ A++ HPDK  +P   EKFKE+A+AY+VLSDP KREI+D+YGE+ LK G   GG +G
Sbjct:    5 YYQTLGLARGASDDEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGGSPSGGSSG 83          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_TERTT (Chaperone protein dnaJ OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 55/136 (40.44%), Postives = 74/136 (54.41%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGEDAL--KEGMGGGAGAHDPFD--IXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSL 544
            YYE+LGV+++ S +DLKKAY+K A+K HPD+  D     EKFKE ++AYEVLSD +KR  YDQ+G   +  + GMGGGA     F                            D+ + L +SLED   GTS K+ +
Sbjct:    6 YYEVLGVARDVSEQDLKKAYRKVAMKFHPDRNPDDASAEEKFKEASEAYEVLSDKQKRAAYDQFGHAGVEGQGGMGGGAEGFGSFSDIFGDVFGDIFGGAGGGRGRGGPSRGADLRYTLDLSLEDAVRGTSVKIKV 141          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_STAES (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 12228) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 50/136 (36.76%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG-GAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNV 556
            YYE+LGV+K+AS +++KKAY+K + K HPD   + G  EKFKE+++AYEVLSD  KR  YDQ+G D  + G G  G G  D                           +D+ + + ++ E+   GT K++S+ ++V
Sbjct:    6 YYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRANYDQFGHDGPQGGFGSQGFGGSDFGGFEDIFSSFFGGGSRQRDPNAPRKGDDLQYTMTITFEEAVFGTKKEISIKKDV 141          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_PORG3 (Chaperone protein dnaJ OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 47/76 (61.84%), Postives = 57/76 (75.00%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGG 376
            YYE+LGVSKNA+ ++LKKAY+K AI+ HPDK  GD    E FKE+A+AY+VLSDPEKR  YDQ+G   L    GGG
Sbjct:    7 YYEVLGVSKNATDDELKKAYRKKAIQYHPDKNPGDKEAEEHFKEVAEAYDVLSDPEKRSRYDQFGHAGLGGAAGGG 82          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_PELCD (Chaperone protein dnaJ OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 53/142 (37.32%), Postives = 77/142 (54.23%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDK-GGD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGGGAGAHD-------PFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRN 553
            YYE+LGV +NAS  ++KKAY+K AIK HPDK  GD    +KFKE+++AY +LSD ++R IYDQYG   L  G GGG G++        PF+                        +D+ + L ++ E+   G   K+ + R+
Sbjct:    6 YYEVLGVHRNASETEIKKAYRKLAIKYHPDKNAGDKAAEDKFKEISEAYSILSDTQQRVIYDQYGHAGLNGG-GGGGGSYSSGGFGGTPFEDLFGDIFGDIFGGRGSQRSRGRRGDDLRYNLSINFEEAAFGLETKIQIPRH 146          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_HAEIN (Chaperone protein dnaJ OS=Haemophilus influenzae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 53/138 (38.41%), Postives = 75/138 (54.35%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP----EKFKELAQAYEVLSDPEKREIYDQYGEDALKE-----GMGGGAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLS 547
            YYE+LG+ K AS +++K+AYK+ A K+HPDK        EKFKE+ +AYEVL D +KR  YDQYG  A ++     G GGG G  D F                         ED+ + L++SLE+   GT+K + ++
Sbjct:    6 YYEVLGLQKGASEDEIKRAYKRLASKHHPDKNQGSKEAEEKFKEINEAYEVLGDDQKRAAYDQYGHAAFEQGGGAGGFGGGFGGAD-FGDMFGDIFGDIFGGGGRGRQRVVRGEDLRYDLEISLEEAVKGTTKDIQIN 142          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_ALISL (Chaperone protein dnaJ OS=Aliivibrio salmonicida (strain LFI1238) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.988e-18
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKG-GD---PEKFKELAQAYEVLSDPEKREIYDQYGEDALKE-GMGGGAG 382
            +YE+LGVS++AS  D+KKAYK+ A+K HPD+  GD   PEKFKE+  AYE+L+D +KR  YDQYG  A ++ GMGGG G
Sbjct:    6 FYEVLGVSRDASERDIKKAYKRLAMKFHPDRNQGDETAPEKFKEVKVAYEILTDAQKRAAYDQYGHAAFEQGGMGGGGG 84          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNJB1_BOVIN (DnaJ homolog subfamily B member 1 OS=Bos taurus GN=DNAJB1 PE=2 SV=3)

HSP 1 Score: 91.2781 bits (225), Expect = 7.821e-18
Identity = 42/77 (54.55%), Postives = 61/77 (79.22%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPDKGGDP---EKFKELAQAYEVLSDPEKREIYDQYGEDALK-EGMGGGA 379
            YY+ LG+++ AS E++K+AY++ A++ HPDK  +P   EKFKE+A+AY+VLSDP KREI+D+YGE+ LK  G  GG+
Sbjct:    5 YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGPSGGS 81          
BLAST of EY736213 vs. ExPASy Swiss-Prot
Match: DNAJ_STAEQ (Chaperone protein dnaJ OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.821e-18
Identity = 50/136 (36.76%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  161 YYEILGVSKNASAEDLKKAYKKAAIKNHPD---KGGDPEKFKELAQAYEVLSDPEKREIYDQYGEDALKEGMGG-GAGAHDPFDIXXXXXXXXXXXXXXXXXXXXXXXEDVVHPLKVSLEDLYLGTSKKLSLSRNV 556
            YYE+LGV+K+AS +++KKAY+K + K HPD   + G  EKFKE+++AYEVLSD  KR  YDQ+G D  + G G  G G  D                           +D+ + + ++ E+   GT K++S+ ++V
Sbjct:    6 YYEVLGVNKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDENKRVNYDQFGHDGPQGGFGSQGFGGSDFGGFEDIFSSFFGGGSRQRDPNAPRKGDDLQYTMTITFEEAVFGTKKEISIKKDV 141          
The following BLAST results are available for this feature:
BLAST of EY736213 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ2_AQUAE4.585e-1836.54Chaperone protein dnaJ 2 OS=Aquifex aeolicus GN=dn... [more]
DNJB1_MOUSE5.988e-1853.16DnaJ homolog subfamily B member 1 OS=Mus musculus ... [more]
DNAJ_TERTT5.988e-1840.44Chaperone protein dnaJ OS=Teredinibacter turnerae ... [more]
DNAJ_STAES5.988e-1836.76Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]
DNAJ_PORG35.988e-1861.84Chaperone protein dnaJ OS=Porphyromonas gingivalis... [more]
DNAJ_PELCD5.988e-1837.32Chaperone protein dnaJ OS=Pelobacter carbinolicus ... [more]
DNAJ_HAEIN5.988e-1838.41Chaperone protein dnaJ OS=Haemophilus influenzae G... [more]
DNAJ_ALISL5.988e-1858.23Chaperone protein dnaJ OS=Aliivibrio salmonicida (... [more]
DNJB1_BOVIN7.821e-1854.55DnaJ homolog subfamily B member 1 OS=Bos taurus GN... [more]
DNAJ_STAEQ7.821e-1836.76Chaperone protein dnaJ OS=Staphylococcus epidermid... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-C11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736213 ID=EY736213; Name=EY736213; organism=Citrus sinensis; type=EST; length=873bp
CACGCGTCCGCCAGGTTTATTCCTTGGCTTTTGGGGGCTCTCCTGTAGCG
TCTCCGCGAGAGAAATAATGTTCTGGGTCTGTTTCGTTTCTGTGGATTCC
TGTTAAGAAACTCAAAACAAGATGTTTGGAAGAGCACCGAAGAAGAGCAA
TAATACGAGGTACTATGAGATCCTGGGGGTGTCCAAGAACGCTTCCGCTG
AGGACTTGAAGAAGGCTTATAAAAAAGCTGCCATCAAGAATCATCCCGAC
AAGGGCGGCGATCCTGAGAAGTTTAAAGAGTTGGCTCAGGCTTACGAGGT
TCTGAGTGATCCTGAGAAGCGTGAGATATATGATCAGTACGGTGAGGATG
CACTCAAGGAAGGAATGGGTGGTGGCGCTGGCGCCCATGACCCGTTTGAT
ATCTTTTCGTCTTTCTTTGGCGGCAGCCCATTCGGAGGTGGTANCAGCAG
GGGACGGANACAGAGGCGGGGCGAGGACGTGGTTCATCCTTTGAAGGTGT
CCTTGGAGGATCTTTATCTGGGTACCTCGAAGAAGCTCTCACTTTCGCGG
AATGTGATATGCTCGAAGTGCAGTGGCAAAGGGTCNAAATCTGGCGCTTC
GATGAAGTGTTCTGGTTGCCACGGTACGGTATGAAGGTCTCCATAAGGCA
CCTAGGACCCTCTATGATTCAGCAGATCCACCATCCTTGCAATGAATGGC
AGGGTGACGGGTGAGAACGTCAACGATGAAGATCGCTGGCCTCACGGCAG
GGCGAAGAACGCTGTCCGGGGGGAGCAGCGGGGGGAAGGTGAGGGGGGAG
AGGGGCTCCGCCATGGGCGAGAGGATGGCTTCCCTGCGGAGGCAAGGGAC
GCGGGGGGTCGCTCGCGGGAGAG
back to top