EY736204

Overview
NameEY736204
Unique NameEY736204
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length207
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEA7 (3-dehydroquinate synthase OS=Pseudomonas aeruginosa (strain PA7) GN=aroB PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 1.722e-15
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP  V+IDTA++ TLP  ELSAGLAEVIKYG ICDEPF+ WLEEH+
Sbjct:  153 GAFYQPQAVVIDTASLKTLPARELSAGLAEVIKYGFICDEPFITWLEEHM 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEMY (3-dehydroquinate synthase OS=Pseudomonas mendocina (strain ymp) GN=aroB PE=3 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.249e-15
Identity = 37/51 (72.55%), Postives = 43/51 (84.31%), Query Frame = -3
Query:   53 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHVA 205
            G  YQP  VLIDTA+++TLP  ELSAGLAEVIKYG+ICDEPFL WLE ++A
Sbjct:  153 GAFYQPKAVLIDTASLDTLPARELSAGLAEVIKYGLICDEPFLGWLEANMA 203          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEE4 (3-dehydroquinate synthase OS=Pseudomonas entomophila (strain L48) GN=aroB PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.937e-15
Identity = 35/50 (70.00%), Postives = 42/50 (84.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQPN VLIDT ++ TLP  ELSAGLAE+IKYG+ICDEPFL WLE+++
Sbjct:  153 GAFYQPNAVLIDTTSLKTLPQRELSAGLAEIIKYGLICDEPFLGWLEDNM 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEU5 (3-dehydroquinate synthase OS=Pseudomonas stutzeri (strain A1501) GN=aroB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.543e-15
Identity = 36/50 (72.00%), Postives = 41/50 (82.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP  V+IDTAT+ TLP  ELSAGLAEVIKYG+ICDEPFL WLE ++
Sbjct:  153 GAFYQPRAVVIDTATLATLPSRELSAGLAEVIKYGLICDEPFLTWLEANI 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEP1 (3-dehydroquinate synthase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=aroB PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.543e-15
Identity = 35/50 (70.00%), Postives = 42/50 (84.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQPN VLIDT ++ TLP  ELSAGLAEVIKYG+ICD+PFL WLE+++
Sbjct:  153 GAFYQPNAVLIDTTSLKTLPARELSAGLAEVIKYGLICDKPFLAWLEDNM 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEAE (3-dehydroquinate synthase OS=Pseudomonas aeruginosa GN=aroB PE=3 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 8.546e-15
Identity = 35/50 (70.00%), Postives = 40/50 (80.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP  V+IDTA++ TLP  ELSAGLAEVIKYG ICDEPF+ WLE H+
Sbjct:  153 GAFYQPQAVVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEAHM 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_PSEPK (3-dehydroquinate synthase OS=Pseudomonas putida (strain KT2440) GN=aroB PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.247e-14
Identity = 34/50 (68.00%), Postives = 41/50 (82.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP  VLIDT ++ TLP  ELSAGLAEVIKYG+ICD+PFL WLE+++
Sbjct:  153 GAFYQPKAVLIDTTSLKTLPARELSAGLAEVIKYGLICDKPFLAWLEDNM 202          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_MARMS (3-dehydroquinate synthase OS=Marinomonas sp. (strain MWYL1) GN=aroB PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.045e-12
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP  V+IDT T+ +LP  ELSAG+AEVIKYG+ICD PF  WLE+ +
Sbjct:  154 GAFYQPQAVIIDTETLQSLPQRELSAGMAEVIKYGLICDVPFFDWLEQEM 203          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_ACTSZ (3-dehydroquinate synthase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=aroB PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 1.364e-12
Identity = 32/50 (64.00%), Postives = 37/50 (74.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP  V+IDT T+NTLP  E++AGLAEVIKYG I D PF  WLE H+
Sbjct:  154 GAFYQPITVIIDTTTLNTLPKREVNAGLAEVIKYGAILDYPFFEWLERHI 203          
BLAST of EY736204 vs. ExPASy Swiss-Prot
Match: AROB_HAEIN (3-dehydroquinate synthase OS=Haemophilus influenzae GN=aroB PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.327e-12
Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = -3
Query:   56 GGLYQPNVVLIDTATVNTLPPSELSAGLAEVIKYGMICDEPFLXWLEEHV 205
            G  YQP++V+IDT T+NTLP  E++AGLAEVIKYG I D  F  WLE+H+
Sbjct:  154 GAFYQPSMVIIDTLTLNTLPKREVNAGLAEVIKYGAILDYEFFEWLEQHI 203          
The following BLAST results are available for this feature:
BLAST of EY736204 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 49
Match NameE-valueIdentityDescription
AROB_PSEA71.722e-1572.003-dehydroquinate synthase OS=Pseudomonas aeruginos... [more]
AROB_PSEMY2.249e-1572.553-dehydroquinate synthase OS=Pseudomonas mendocina... [more]
AROB_PSEE42.937e-1570.003-dehydroquinate synthase OS=Pseudomonas entomophi... [more]
AROB_PSEU56.543e-1572.003-dehydroquinate synthase OS=Pseudomonas stutzeri ... [more]
AROB_PSEP16.543e-1570.003-dehydroquinate synthase OS=Pseudomonas putida (s... [more]
AROB_PSEAE8.546e-1570.003-dehydroquinate synthase OS=Pseudomonas aeruginos... [more]
AROB_PSEPK3.247e-1468.003-dehydroquinate synthase OS=Pseudomonas putida (s... [more]
AROB_MARMS1.045e-1262.003-dehydroquinate synthase OS=Marinomonas sp. (stra... [more]
AROB_ACTSZ1.364e-1264.003-dehydroquinate synthase OS=Actinobacillus succin... [more]
AROB_HAEIN2.327e-1262.003-dehydroquinate synthase OS=Haemophilus influenza... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-013-C01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736204 ID=EY736204; Name=EY736204; organism=Citrus sinensis; type=EST; length=207bp
AAAGAAGGAGAGGGAACCCCGTCCCCTTGCGTGATACCGTCCGGAATCCC
GGGGCGACATGCTCTTCCAGCCANCTCAGGAAAGGCTCATCGCATATCAT
GCCGTACTTGATGACTTCCGCCAAGCCTGCCGACAGCTCGCTGGGCGGCA
GGGTATTGACGGTGGCGGTGTCGATCAGCACGACATTCGGCTGATACAAC
CCACCCA
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