EY736166

Overview
NameEY736166
Unique NameEY736166
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length864
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736166 vs. ExPASy Swiss-Prot
Match: FENR3_ORYSJ (Ferredoxin--NADP reductase, embryo isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0147900 PE=1 SV=1)

HSP 1 Score: 177.563 bits (449), Expect = 8.155e-44
Identity = 99/211 (46.92%), Postives = 128/211 (60.66%), Query Frame = 2
Query:   95 RVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPR-DPNATVIMLATGTGIAPFRGILWKMFFEKYED*QCVGLAWRLCG 706
            ++ S+  Q  +++   V+       +   +N +KPK PY    +   ++ G  APGET H+V    G VPY EGQS GVI  G +  K G P+ +RLYSIAS+  GD  D KT SLCV+R VY    T +     KG+CSNFLCD KPG +V+ITGP GK ML+P  DPNAT IM+ATGTG+AP+RG L +MF E     +  GLAW   G
Sbjct:   58 KIFSMSVQQASKSKVAVKPLELDNAKEPPLNLYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHGGNVPYWEGQSYGVIPPGENPKKPGSPNTVRLYSIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPTKKGICSNFLCDSKPGDKVQITGPSGKIMLLPEDDPNATHIMIATGTGVAPYRGYLRRMFMEDVPSFKFGGLAWLFLG 268          
BLAST of EY736166 vs. ExPASy Swiss-Prot
Match: FENR2_TOBAC (Ferredoxin--NADP reductase, root-type isozyme, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 2.373e-43
Identity = 105/228 (46.05%), Postives = 131/228 (57.46%), Query Frame = 2
Query:   44 ITLKKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVD--KNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD-PNATVIMLATGTGIAPFRGILWKMFFEKYED*QCVGLAWRLCG 706
            I LK  P      S    +V +  Q  ++A   V   S +  +   +N +KPK PY    +   ++ G  APGET H+V   +G +PY EGQS GVI  G +  K G PH +RLY IAS+  GD  D KT SLCV+R VY    T +      GVCSNFLCD KPG +VKITGP GK ML+P + PNAT IM+ TGTG+APFRG L +MF E     +  GLAW   G
Sbjct:   45 IDLKAAP------SRNQHIVCMSVQQASKAKVSVSPLSLEDAKEPPLNIYKPKEPYTATIVSVERLVGPKAPGETCHIVIDHDGNLPYWEGQSYGVIPPGENPKKPGNPHNVRLYLIASTRYGDSFDGKTASLCVRRAVYYDPETGKEDPSKNGVCSNFLCDSKPGDKVKITGPSGKIMLLPEEIPNATHIMIGTGTGVAPFRGYLRRMFMESVPT-KFNGLAWLFLG 265          
BLAST of EY736166 vs. ExPASy Swiss-Prot
Match: FENR_CHLRE (Ferredoxin--NADP reductase, chloroplastic OS=Chlamydomonas reinhardtii GN=PETH PE=1 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 1.439e-40
Identity = 92/211 (43.60%), Postives = 119/211 (56.40%), Query Frame = 2
Query:   98 VVSVRAQVTTEAPAKVEKESKKMEEGVI-VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNGKPHKL---RLYSIASSALGDFGDSKTVSLCVKRLVY----TNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGILWKMFFEKYED*QCVGLAWRLCG 706
            V + +A               K+EEG + +N +  K P+  +     KITG  A GET H++  TEG++P+ EGQS GVI  G   N K  ++   RLYSIASS  GD GD +T SLCV+R VY    T +     KG+CSNFLCD  PG E+ +TGP GK +L+P D NA +I +ATGTGIAPFR    + F E     +  GL W   G
Sbjct:   34 VAATKASTAVTTDMSKRTVPTKLEEGEMPLNTYSNKAPFKAKVRSVEKITGPKATGETCHIIIETEGKIPFWEGQSYGVIPPGTKINSKGKEVPTARLYSIASSRYGDDGDGQTASLCVRRAVYVDPETGKEDPAKKGLCSNFLCDATPGTEISMTGPTGKVLLLPADANAPLICVATGTGIAPFRSFWRRCFIENVPSYKFTGLFWLFMG 244          
BLAST of EY736166 vs. ExPASy Swiss-Prot
Match: BOXA_AZOEV (Benzoyl-CoA oxygenase component A OS=Azoarcus evansii GN=boxA PE=1 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.156e-28
Identity = 67/154 (43.51%), Postives = 94/154 (61.04%), Query Frame = 2
Query:  182 VNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYK--EGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDPNATVIMLATGTGIAPFRGI 637
            VN + P  P       N ++T +DA  +  H+V    G  P+   EGQSIG+I  GVD+ GKPH LR+YS+AS   G+      +SL VKR+V  +E G   +GV SN++CDLK G +V++TGP G   LMP  P ++++M+ TGTG AP R +
Sbjct:  137 VNLYTPANPITATVTGNYRLTAEDASSDIHHIVLDF-GTTPFPVLEGQSIGIIPPGVDEKGKPHLLRMYSVASPRDGERPHYNNLSLTVKRVVEDHE-GNPTRGVASNYVCDLKKGDKVQVTGPYGSTYLMPNHPGSSIMMICTGTGSAPMRAM 288          
The following BLAST results are available for this feature:
BLAST of EY736166 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
FENR3_ORYSJ8.155e-4446.92Ferredoxin--NADP reductase, embryo isozyme, chloro... [more]
FENR2_TOBAC2.373e-4346.05Ferredoxin--NADP reductase, root-type isozyme, chl... [more]
FENR_CHLRE1.439e-4043.60Ferredoxin--NADP reductase, chloroplastic OS=Chlam... [more]
BOXA_AZOEV2.156e-2843.51Benzoyl-CoA oxygenase component A OS=Azoarcus evan... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-G03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736166 ID=EY736166; Name=EY736166; organism=Citrus sinensis; type=EST; length=864bp
CCACGCGTCCGCCCACGCGTCCGCTATCATCTCTCCTGACAGAATCACCT
TAAAAAAGGTTCCATTTTACTACAAAGATGTTTCAACTGGAGGGAGAGTG
GTTTCTGTCAGAGCTCAGGTTACCACTGAGGCTCCTGCTAAGGTCGAGAA
AGAGTCCAAGAAAATGGAGGAAGGTGTTATTGTTAACAAGTTCAAACCTA
AGACACCTTACATTGGCAGATGCCTTTTAAACACTAAGATCACTGGTGAT
GATGCTCCTGGAGAGACCTGGCACATGGTCTTCAGCACTGAAGGAGAGGT
TCCCTACAAAGAAGGGCAATCAATTGGGGTGATTGCAGATGGTGTTGACA
AGAATGGGAAGCCTCACAAACTGAGATTATACTCCATTGCTAGCAGTGCC
CTTGGTGACTTTGGAGACTCCAAAACTGTTTCTTTATGTGTGAAAAGGCT
TGTGTACACCAACGAAAATGGAGAAATTGTTAAGGGAGTCTGCTCAAATT
TCTTGTGTGACTTGAAGCCTGGGGCTGAAGTGAAAATTACAGGACCTGTT
GGGAAAGAGATGCTCATGCCAAGGGATCCCAATGCTACAGTCATCATGCT
TGCGACTGGAACTGGAATCGCTCCATTCCGTGGGATTTTGTGGAAAATGT
TCTTTGAGAAGTACGAAGACTGACAGTGCGTGGGTTTGGCCTGGCGTCTC
TGTGGGTGGCCCGTCTAACATTGCCCTGGTCTCCGAGGAGGGGTGCGGGC
ATCATGACCGGGCAGGCCCCTGGCTACCTGTCAGCTAGAATGGCGGCTGA
TTGTGCAGCGAAAGGGGGCAAGGGTGGGCTAGATCGTCATCGAACACCCC
AGAGGGTCCACACG
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