EY736163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_ATEGE (Cystic fibrosis transmembrane conductance regulator OS=Ateles geoffroyi GN=CFTR PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.077e-34 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1204 WPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFTGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRALKQ 1390 HSP 2 Score: 31.5722 bits (70), Expect = 6.077e-34 Identity = 13/44 (29.55%), Postives = 25/44 (56.82%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSL 726 A CT+I HRI +++C + +V++ ++ +LL + SL Sbjct: 1393 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNEKSL 1436
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABC4_SCHPO (ATP-binding cassette transporter abc4 OS=Schizosaccharomyces pombe GN=abc4 PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 6.077e-34 Identity = 72/198 (36.36%), Postives = 104/198 (52.53%), Query Frame = 3 Query: 15 PPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDK-------LDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 P WP G++ + V Y + P +LK + L I+ EK+ VVGRTGSGKSTL R R R IPQ+P+LF GTVRSN+DP + D + ++L+ ++ A D LD+ VA G N+S GQ+Q+L L R +++ S+++ +DE TASVD D +IQ+ +RE Sbjct: 1203 PATWPKEGDIVFNHVSVSYSAAGPTILKDVNLHINPSEKVAVVGRTGSGKSTLGLTLLRFTHRISGEIYINGRETQSVNLNALRQRISFIPQDPILFSGTVRSNLDPFDELEDNFLNEALKTSGASSMIMAHTDDQKPIHITLDTHVASEGSNFSQGQKQVLALARAIVRRSKIIILDECTASVDDAMDQKIQKTLRE 1400 HSP 2 Score: 33.113 bits (74), Expect = 6.077e-34 Identity = 15/35 (42.86%), Postives = 23/35 (65.71%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQL 708 T++ IAHR+ T++D DK +V+D E G P+ L Sbjct: 1406 TMLCIAHRLKTIVDYDKVMVLDKGVLVEYGPPAVL 1440
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_CALJA (Cystic fibrosis transmembrane conductance regulator OS=Callithrix jacchus GN=CFTR PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.914e-34 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1205 WPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFTGTFRKNLDPYEQWSDQEIWKVADEVGLRTVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRALKQ 1391 HSP 2 Score: 31.5722 bits (70), Expect = 7.914e-34 Identity = 13/44 (29.55%), Postives = 25/44 (56.82%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSL 726 A CT+I HRI +++C + +V++ ++ +LL + SL Sbjct: 1394 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNEKSL 1437
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_CALMO (Cystic fibrosis transmembrane conductance regulator OS=Callicebus moloch GN=CFTR PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.915e-34 Identity = 68/188 (36.17%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+E+WK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1204 WPSGGQMTIKDLTAKYIEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSVTLQQWRKAFGVIPQKVFIFTGTFRKNLDPYEQWSDQEVWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRALKQ 1390 HSP 2 Score: 31.5722 bits (70), Expect = 7.915e-34 Identity = 13/44 (29.55%), Postives = 25/44 (56.82%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSL 726 A CT+I HRI +++C + +V++ ++ +LL + SL Sbjct: 1393 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNEKSL 1436
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_CANFA (Cystic fibrosis transmembrane conductance regulator OS=Canis familiaris GN=CFTR PE=2 SV=2) HSP 1 Score: 136.732 bits (343), Expect = 1.342e-33 Identity = 71/194 (36.60%), Postives = 111/194 (57.22%), Query Frame = 3 Query: 6 VRPPPNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 VR WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ RLV R+ FG+IPQ+ +F GT R N+DP GQ++D+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L+ +++L +DE +A +D T I+R +++ Sbjct: 1201 VREDDIWPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSALLRLVNTEGEIQIDGVSWDSIPLQEWRRA-FGVIPQKVFIFSGTFRKNLDPYGQWNDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLRKAKILLLDEPSAHLDPITYQIIRRTLKQ 1393 HSP 2 Score: 28.1054 bits (61), Expect = 1.342e-33 Identity = 12/43 (27.91%), Postives = 24/43 (55.81%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPS 723 A CT+I HRI +++C + +V++ ++ +LL + S Sbjct: 1396 ADCTVILSEHRIEAMLECQRFLVIEDSRLRQFESIQRLLSERS 1438
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABC1_SCHPO (ATP-binding cassette transporter abc1 OS=Schizosaccharomyces pombe GN=abc1 PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 1.343e-33 Identity = 75/195 (38.46%), Postives = 103/195 (52.82%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDK--------LDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR 584 WP G+V + +L V Y VL+ I L I EKI +VGRTGSGKST+ R R R +IPQ+PVL GTVRSN+DP +Y D E+ + L+ + +V A LD+ V G N+S GQRQ+L L R +++ SR++ +DE+TASVD TD IQ+++R Sbjct: 1174 WPTLGHVSIKNLTVSYSIGQAAVLEDINLEILPKEKIAIVGRTGSGKSTMGLTLLRFTMIMSGAVEVDGIDINSLDLEVLRQRISLIPQDPVLISGTVRSNLDPFEEYGDGELNEILKTASCESLVQASNKNSLDAFAIHLDTPVDSGGVNFSSGQRQILALARALVRKSRIVILDESTASVDDTTDRRIQQMLR 1368 HSP 2 Score: 36.965 bits (84), Expect = 1.343e-33 Identity = 16/35 (45.71%), Postives = 23/35 (65.71%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQL 708 T++ IAHRI T++D DK +V+D+ E G P L Sbjct: 1375 TVLCIAHRIKTIVDYDKVLVLDSGKTVEFGSPKSL 1409
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_SHEEP (Cystic fibrosis transmembrane conductance regulator OS=Ovis aries GN=CFTR PE=1 SV=2) HSP 1 Score: 133.265 bits (334), Expect = 1.748e-33 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1205 WPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFLRLLN-TKGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQ 1391 HSP 2 Score: 31.187 bits (69), Expect = 1.748e-33 Identity = 15/59 (25.42%), Postives = 31/59 (52.54%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKL 771 A CT+I HRI +++C + +V++ ++ ++L + SL ++ P +KL Sbjct: 1394 ADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQRMLSEKSLFRQAIS--PADRLKL 1450
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_RABIT (Cystic fibrosis transmembrane conductance regulator OS=Oryctolagus cuniculus GN=CFTR PE=2 SV=4) HSP 1 Score: 131.724 bits (330), Expect = 2.965e-33 Identity = 68/188 (36.17%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + L +Y + +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1205 WPSGGQMTVKGLTAKYIDSGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQ 1391 HSP 2 Score: 31.9574 bits (71), Expect = 2.965e-33 Identity = 13/44 (29.55%), Postives = 25/44 (56.82%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSL 726 A CT+I HRI +++C + +V++ ++ +LL + SL Sbjct: 1394 ADCTVILCEHRIEAMLECQRFLVIEENTVRQYESIQKLLSEKSL 1437
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_SQUAC (Cystic fibrosis transmembrane conductance regulator OS=Squalus acanthias GN=CFTR PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 3.861e-33 Identity = 68/187 (36.36%), Postives = 110/187 (58.82%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR 584 WP+ G + + +L +Y S+ VL+ ++ S++ G+++G++GRTG+GKSTL+ RL+ + R FG+IPQ+ +F GT R N+DP Q+SDEEIWK E LK ++ PDKL+ ++ D G S G +QL+CL R +L +++L +DE TA +D T I++ ++ Sbjct: 1214 WPSGGQMMVNNLTAKYTSDGRAVLQDLSFSVNAGQRVGLLGRTGAGKSTLLSALLRLLS-TEGEIQIDGISWNSVSLQKWRKAFGVIPQKVFVFSGTFRKNLDPYEQWSDEEIWKVTEEVGLKSMIEQFPDKLNFVLVDGGYILSNGHKQLMCLARSILSKAKILLLDEPTAHLDPVTFQIIRKTLK 1399 HSP 2 Score: 29.6462 bits (65), Expect = 3.861e-33 Identity = 12/42 (28.57%), Postives = 24/42 (57.14%), Query Frame = 1 Query: 601 CTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSL 726 CT+I HR+ +++C + +V++ K+ +LL + SL Sbjct: 1405 CTVILSEHRVEALLECQQFLVIEGCSVKQFDALQKLLTEASL 1446 HSP 3 Score: 71.633 bits (174), Expect = 6.413e-12 Identity = 45/160 (28.12%), Postives = 73/160 (45.62%), Query Frame = 3 Query: 90 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 569 VLK I+ + GE + + G TGSGKS+L+ + +EPS R PQ P + GT++ NI Y + + CQL++ + P+K +++ D G S GQR + L R + K + L +D + +D T+ +I Sbjct: 441 VLKNISFKLEKGELLAIAGSTGSGKSSLLMMIMGELEPSDGKIKHS-------------GRISYSPQVPWIMPGTIKDNIIFGLSYDEYRYTSVVNACQLEEDITVFPNKDKTVLGDGGITLSGGQRARISLARALYKDADLYLLDSPFSHLDVTTEKDI 587
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_CARPS (Cystic fibrosis transmembrane conductance regulator OS=Carollia perspicillata GN=CFTR PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 1.446e-32 Identity = 69/188 (36.70%), Postives = 107/188 (56.91%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP G + + +L +Y N +L+ I+ SI G+++G++GRTGSGKSTL+ RL+ + R FG+IPQ+ +F GT R N+DP Q++DEEIWK + L+ V+ P KLD ++ D G S G +QLLCL R +L +++L +DE +A +D T I+R +++ Sbjct: 1206 WPLGGQMTIKNLIAKYTDNGNAILENISFSISPGQRVGLLGRTGSGKSTLLSALLRLLN-TEGEIQIDGVSWDSVTLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWNDEEIWKVADEVGLRSVIEQFPGKLDFVLLDGGFVLSHGHKQLLCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQ 1392 HSP 2 Score: 29.261 bits (64), Expect = 1.446e-32 Identity = 13/52 (25.00%), Postives = 27/52 (51.92%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEEL 750 A CT+I HRI +++C + +V++ ++ +LL + L ++ L Sbjct: 1395 ADCTVILSEHRIEAMLECQQFLVIEENKVRQYDSLQKLLSEKILFQQAMSPL 1446 The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 452
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bpback to top |