EY736163

Overview
NameEY736163
Unique NameEY736163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_RHOP5 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisA53) GN=ndvA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.221e-15
Identity = 51/186 (27.42%), Postives = 92/186 (49.46%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            G V+  ++   Y    P + + ++ +   G+ I +VG TG+GKST I +  R  +P                    R   G++ QE +LF+ T+  N+  +G+   ++EE+  +  R Q  D +     K D+   + G   S G+RQ L + R +LK   +L +DEAT+++D+ T+A++   + E
Sbjct:  343 GLVEFDNVSFSYDGKRPAI-EDLSFTALPGQTIALVGATGAGKSTAIALLHRAFDPQSGVIKIDGMDVRGLTLAGLRRNIGVVFQEALLFDRTIADNLR-VGKPDATEEEMRIAASRAQALDFIERSELKFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDE 526          

HSP 2 Score: 25.0238 bits (53), Expect = 1.221e-15
Identity = 13/38 (34.21%), Postives = 19/38 (50.00%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEK 717
            T   IAHR+ T+    + +V D     ESG   +LL +
Sbjct:  532 TTFVIAHRLSTIRHATRILVFDNGRVIESGSFDELLAR 569          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: STE6_YEAST (Alpha-factor-transporting ATPase OS=Saccharomyces cerevisiae GN=STE6 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.249e-15
Identity = 47/172 (27.33%), Postives = 89/172 (51.74%), Query Frame = 3
Query:   81 TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDP--IGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREG 590
            T  V K +   +  G+ +G++G +G+GKSTL+ +  +L                       R    ++ Q+P+LF GT+R N+      +  + E++ +L+   + D V + P  LD+ +  +    S GQ Q LC+ R +L+ S++L +DE T+++DS + + I  I+++G
Sbjct: 1066 TAFVYKNMNFDMFCGQTLGIIGESGTGKSTLVLLLTKLYNCEVGKIKIDGTDVNDWNLTSLRKEISVVEQKPLLFNGTIRDNLTYGLQDEILEIEMYDALKYVGIHDFVISSPQGLDTRIDTT--LLSGGQAQRLCIARALLRKSKILILDECTSALDSVSSSIINEIVKKG 1235          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: YGAD_BACSU (Putative multidrug export ATP-binding/permease protein ygaD OS=Bacillus subtilis GN=ygaD PE=3 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 50/181 (27.62%), Postives = 95/181 (52.49%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD--EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            G V+  ++  +Y  +   +L  ++L ++ GE + +VG +G GKSTL+ +  R  + +                   R++ G++ Q+  LF  T+R NI  IG+     EEI ++ +     + + + P+  ++ V + G   S GQ+Q + + RV LK+  LL +DEAT+++D +++  IQ
Sbjct:  339 GGVEFQNVSFQYEKDKENILHDVSLKVNRGETVALVGMSGGGKSTLVSLIPRFYDVTSGRLLIDGTDIRDYEARSLRNQVGMVLQDTFLFSETIRENI-AIGKPDATLEEIIEAAKAANAHEFIMSFPEGYETRVGERGVKLSGGQKQRISIARVFLKNPPLLILDEATSALDLESEHYIQ 518          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: Y1384_MYCBO (Uncharacterized ABC transporter ATP-binding protein Mb1384 OS=Mycobacterium bovis GN=Mb1384 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 46/179 (25.70%), Postives = 95/179 (53.07%), Query Frame = 3
Query:   42 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNI---DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 569
            ++  D+   Y   +  VL G++  +  G    +VG +G GKST++ +   L +P+                   ++   ++ Q P LF GT+R N+   DP    SD++  +++   ++ +++A  PD  +++V ++G   S G+RQ + + R +LK + +L +DEAT+++D++ +A +
Sbjct:  332 IEFDDVAFGYDGGSGPVLDGVSFCLQPGTTTAIVGPSGCGKSTILALIAGLHQPTRGRVLIDGTDVATLDARAQQAVCSVVFQHPYLFHGTIRDNVFAADPGA--SDDQFAQAVRLARVDELIARLPDGANTIVGEAGSALSGGERQRVSIARALLKAAPVLLVDEATSALDAENEAAV 508          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: Y1349_MYCTU (Uncharacterized ABC transporter ATP-binding protein Rv1349/MT1392 OS=Mycobacterium tuberculosis GN=Rv1349 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.631e-15
Identity = 46/179 (25.70%), Postives = 95/179 (53.07%), Query Frame = 3
Query:   42 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNI---DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 569
            ++  D+   Y   +  VL G++  +  G    +VG +G GKST++ +   L +P+                   ++   ++ Q P LF GT+R N+   DP    SD++  +++   ++ +++A  PD  +++V ++G   S G+RQ + + R +LK + +L +DEAT+++D++ +A +
Sbjct:  332 IEFDDVAFGYDGGSGPVLDGVSFCLQPGTTTAIVGPSGCGKSTILALIAGLHQPTRGRVLIDGTDVATLDARAQQAVCSVVFQHPYLFHGTIRDNVFAADPGA--SDDQFAQAVRLARVDELIARLPDGANTIVGEAGSALSGGERQRVSIARALLKAAPVLLVDEATSALDAENEAAV 508          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: TAP2_HUMAN (Antigen peptide transporter 2 OS=Homo sapiens GN=TAP2 PE=1 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.130e-15
Identity = 56/196 (28.57%), Postives = 96/196 (48.98%), Query Frame = 3
Query:   18 PNWPAHGNVDLIDLQ--VRYRS------NTP--LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            PN P+ G +    LQ  V+++       N P   VLKG+T ++  GE   +VG  GSGKST+  +   L +P+                    S+   + QEPVLF G+VR+NI   +    D+++  + +     D +      + + V + G   + GQ+Q L + R +++  R+L +DEAT+++D Q +  +Q
Sbjct:  451 PNLPSPGTLAPTTLQGVVKFQDVSFAYPNRPDRPVLKGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQVLLDEKPISQYEHCYLHSQVVSVGQEPVLFSGSVRNNIAYGLQSCEDDKVMAAAQAAHADDFIQEMEHGIYTDVGEKGSQLAAGQKQRLAIARALVRDPRVLILDEATSALDVQCEQALQ 646          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MDR3_CAEEL (Multidrug resistance protein 3 OS=Caenorhabditis elegans GN=pgp-3 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 2.130e-15
Identity = 49/184 (26.63%), Postives = 91/184 (49.46%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNT-PLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            GN+++  +   Y +    LVL G  +S + G+ + +VG +G GKST IQ+  R  +                     R    ++ QEP LF  T+R NI   +   + +++ K+     +   V   PD  D+ V  SG   S GQ+Q + + R +++  ++L +DEAT+++D++++  +Q  +
Sbjct: 1027 GNINMRGVYFAYPNRRRQLVLDGFNMSANFGQTVALVGPSGCGKSTTIQLIERYYDALCGSVKIDDSDIRDLSVKHLRDNIALVGQEPTLFNLTIRENITYGLENITQDQVEKAATLANIHTFVMGLPDGYDTSVGASGGRLSGGQKQRVAIARAIVRDPKILLLDEATSALDTESEKIVQEAL 1210          

HSP 2 Score: 81.2629 bits (199), Expect = 8.093e-15
Identity = 43/163 (26.38%), Postives = 85/163 (52.15%), Query Frame = 3
Query:   90 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            +LKG++  ++ GE + +VG +G GKST I +  R                        RS  GI+ QEP++F  TV  NI  +G    +D++I ++ +     + +    D+ D+++       S GQ+Q + + R +++  ++L +DEAT+++D++++  +Q
Sbjct:  393 ILKGVSFEVNPGETVALVGHSGCGKSTSIGLLMRFYNQCAGMIKLDGIPIQEYNIRWLRSTIGIVQQEPIIFVATVAENIR-MGDVLITDQDIEEACKMANAHEFICKLSDRYDTVIGAGAVQLSGGQKQRVAIARAIVRKPQILLLDEATSALDTESERMVQ 554          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCB4_DICDI (ABC transporter B family member 4 OS=Dictyostelium discoideum GN=abcB4 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.130e-15
Identity = 49/183 (26.78%), Postives = 96/183 (52.46%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPL-VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNI---DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            G +  I++  +Y +   + VL G+ L++  G+ + + G +G GKST+  +  R  + S                   RSR GI+ QEP LF  T+  N+   +P    +++EI ++ +       ++  P   +++V + G   S GQ+Q + + R +LK+ +++ +DEAT+++DSQ++  +Q
Sbjct:  522 GEIKFINVDFKYPTRPHVHVLNGLNLTLKPGQVVALAGSSGGGKSTIAGLLERFYDISNGDITIDGYSIKQLNAKWLRSRIGIVSQEPSLFATTILENLRYGNP--NATEDEIIEAAKLANAHQFISNFPKGYETIVGERGVQLSGGQKQRIAIARAILKNPQIIILDEATSALDSQSELLVQ 702          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_BARHE (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Bartonella henselae GN=ndvA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.782e-15
Identity = 51/193 (26.42%), Postives = 101/193 (52.33%), Query Frame = 3
Query:    9 RPPPNWPAHGNVD--LIDLQVRYR-SNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            + P N P+  NV   +    V Y+  N+   +  I+  +  G+ + +VG TG+GK+TLI +  R+ +P+                   R     + Q+  LF  T+  NI  IG+   ++EE++++ +     D +  K D+ ++++ + G   S G++Q L + R +LK++ +L +DEAT+++D +T+A ++
Sbjct:  320 KEPENLPSLQNVKGAIQFHHVTYKFPNSSQGIFDISFEVKTGQTVAIVGPTGAGKTTLINLLQRIYDPTLGHISIDGINIRSVNRESLRKSLATVFQDAGLFNRTIHDNIS-IGRTTATNEELYEAAKIAAAHDFILKKTDRYNTMIGEQGSQLSGGEKQRLAIARAVLKNAPILILDEATSALDVETEARVK 511          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_DESPS (Lipid A export ATP-binding/permease protein msbA OS=Desulfotalea psychrophila GN=msbA PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.782e-15
Identity = 48/187 (25.67%), Postives = 95/187 (50.80%), Query Frame = 3
Query:   27 PAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYS--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            P   +++  D+   Y   T  +L  I L +  GE + +VG +G GK+TL  +  R ++                     R++  ++ Q+ +LF  T+R+NI   G+ S  +EEI ++ +       +   P+  D+ + + G   S GQRQ + + R +L  + +L +DEAT+++D++++ E+Q+ +
Sbjct:  333 PFKESIEFHDVSFSY--GTEKILSHINLKVPAGEALAIVGPSGGGKTTLTNLIPRFIDLQEGSITIDGTDIRDVTTNSLRNQIAMVTQQTILFNDTIRNNI-AYGKDSCTEEEIRRAAKAAHALTFIEELPNGFDTALGEGGAKLSGGQRQRISIARALLADAPILILDEATSALDTESEREVQKAL 516          
The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
NDVA_RHOP51.221e-1527.42Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
STE6_YEAST1.249e-1527.33Alpha-factor-transporting ATPase OS=Saccharomyces ... [more]
YGAD_BACSU1.631e-1527.62Putative multidrug export ATP-binding/permease pro... [more]
Y1384_MYCBO1.631e-1525.70Uncharacterized ABC transporter ATP-binding protei... [more]
Y1349_MYCTU1.631e-1525.70Uncharacterized ABC transporter ATP-binding protei... [more]
TAP2_HUMAN2.130e-1528.57Antigen peptide transporter 2 OS=Homo sapiens GN=T... [more]
MDR3_CAEEL2.130e-1526.63Multidrug resistance protein 3 OS=Caenorhabditis e... [more]
ABCB4_DICDI2.130e-1526.78ABC transporter B family member 4 OS=Dictyostelium... [more]
NDVA_BARHE2.782e-1526.42Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
MSBA_DESPS2.782e-1525.67Lipid A export ATP-binding/permease protein msbA O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGTCCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTC
ATAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGG
TATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTA
CAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAG
CCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTCATTGTTGGG
GCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCC
TTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCA
GATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGT
AGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACA
ACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGTTATGCTA
AAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTC
ACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGGAGTCTGCTGCC
TGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGATTGTGA
TAAAGCTATAGTCGTTGATGCACGATGGGCGAAAGAATCTGGCGAGCCAT
CCCAGTTGCTTGAAAAGCCATCACTCTCCGCAGCATCGGTGGAAGAATTA
CCCAACCACACCATCAAACTGGACGAACGTATCCCTTGGACTCGATCGCG
GGTCGAACCGACGTTCCGGTGAAGGAAGCCCGTTATATATACAAGTTAGT
GTTCTGTCGCTGGCACAATCCCTT
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