EY736163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB2B_ARATH (ABC transporter B family member 2 OS=Arabidopsis thaliana GN=ABCB2 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.782e-15 Identity = 50/184 (27.17%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPLVL-KGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNI-DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 G++ D Y S +V+ + L+I G+ + +VG +GSGKST+I + R EP R + G++ QEP LF T+R NI + EEI ++ + + + P+ ++ V + G S GQ+Q + + R ++K+ +L +DEAT+++D++++ +Q + Sbjct: 359 GHIQFKDATFSYPSRPDVVIFDRLNLAIPAGKIVALVGGSGSGKSTVISLIERFYEPISGAVLLDGNNISELDIKWLRGQIGLVNQEPALFATTIRENILYGKDDATAEEITRAAKLSEAISFINNLPEGFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEAL 542 HSP 2 Score: 82.4185 bits (202), Expect = 3.633e-15 Identity = 48/184 (26.09%), Postives = 91/184 (49.46%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPLVL-KGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ-YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 G ++L + Y S +V+ + L + G+ + +VG++GSGKS++I + R +P+ R G++ QEP LF T+ NI + S E+ +S + + P+ + V + G S GQRQ + + R +LK+ +L +DEAT+++D +++ +Q+ + Sbjct: 988 GTIELKGVHFSYPSRPDVVIFRDFDLIVRAGKSMALVGQSGSGKSSVISLILRFYDPTAGKVMIEGKDIKKLDLKALRKHIGLVQQEPALFATTIYENILYGNEGASQSEVVESAMLANAHSFITSLPEGYSTKVGERGVQMSGGQRQRIAIARAILKNPAILLLDEATSALDVESERVVQQAL 1171
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_RHOPS (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain BisB5) GN=ndvA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 3.482e-15 Identity = 51/186 (27.42%), Postives = 91/186 (48.92%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 G V+ +D+ Y P + + ++ + G+ I +VG TG+GKST I + R +P R G++ QE +LF ++ N+ +G+ +D E+ + ER Q D + D+ + G S G+RQ L + R +LK +L +DEAT+++D+ T+A++ + E Sbjct: 343 GLVEFLDVSFSYDGKRPAI-EDLSFTALPGQTIALVGATGAGKSTAIALLHRAFDPQSGVVKIDGMDVRGLTMSGLRRNIGVVFQEALLFNRSIAENLR-VGKPDATDAELRLAAERAQALDFIDRNDLGFDTNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDE 526 HSP 2 Score: 23.0978 bits (48), Expect = 3.482e-15 Identity = 12/36 (33.33%), Postives = 18/36 (50.00%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLL 711 T IAHR+ T+ + +V D ESG +L+ Sbjct: 532 TTFVIAHRLSTIRHATRILVFDNGKVIESGTFDELV 567
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_BORPE (Lipid A export ATP-binding/permease protein msbA OS=Bordetella pertussis GN=msbA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.633e-15 Identity = 47/184 (25.54%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 27 PAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID--PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 P G V+ + R+ + ++ + G+ + +VGR+GSGK+TL+ + R V P RS ++ Q+ VLF+ T+ +N+ G D + +L L + V P + + V + S GQRQ L + R ++K++ +L +DEAT+++D++++ ++Q Sbjct: 377 PVRGKVEFRAVSHRFPDADRDTVSAVSFLVEPGQTVALVGRSGSGKTTLVNMLPRFVLPDGGDILFDDVPIQDLTLRSLRSHLSLVSQDVVLFDDTIAANVGYGAGGTVDDARVRDALAAANLLEFVDGLPLGIHTPVGQNAARLSGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQ 560
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_BORPA (Lipid A export ATP-binding/permease protein msbA OS=Bordetella parapertussis GN=msbA PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.633e-15 Identity = 47/184 (25.54%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 27 PAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID--PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 P G V+ + R+ + ++ + G+ + +VGR+GSGK+TL+ + R V P RS ++ Q+ VLF+ T+ +N+ G D + +L L + V P + + V + S GQRQ L + R ++K++ +L +DEAT+++D++++ ++Q Sbjct: 377 PVRGKVEFRAVSHRFPDADRDTVSAVSFLVEPGQTVALVGRSGSGKTTLVNMLPRFVLPDGGDILFDDVPIQDLTLRSLRSHLSLVSQDVVLFDDTIAANVGYGAGGTVDDARVRDALAAANLLEFVDGLPLGIHTPVGQNAARLSGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQ 560
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_BORBR (Lipid A export ATP-binding/permease protein msbA OS=Bordetella bronchiseptica GN=msbA PE=3 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.633e-15 Identity = 47/184 (25.54%), Postives = 90/184 (48.91%), Query Frame = 3 Query: 27 PAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID--PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 P G V+ + R+ + ++ + G+ + +VGR+GSGK+TL+ + R V P RS ++ Q+ VLF+ T+ +N+ G D + +L L + V P + + V + S GQRQ L + R ++K++ +L +DEAT+++D++++ ++Q Sbjct: 377 PVRGKVEFRAVSHRFPDADRDTVSAVSFLVEPGQTVALVGRSGSGKTTLVNMLPRFVLPDGGDILFDDVPIQDLTLRSLRSHLSLVSQDVVLFDDTIAANVGYGAGGTVDDARVRDALAAANLLEFVDGLPLGIHTPVGQNAARLSGGQRQRLAIARALIKNAPVLILDEATSALDNESERQVQ 560
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCB6_RAT (ATP-binding cassette sub-family B member 6, mitochondrial OS=Rattus norvegicus GN=Abcb6 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.633e-15 Identity = 47/181 (25.97%), Postives = 94/181 (51.93%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYS--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 G V+ ++ Y L+ ++ ++ G+ + +VG +G+GKST++++ FR + S RS G++PQ+ VLF T+ +NI G+ + D EI + + + D + + P+ ++ V + G S G++Q + + R +LK ++ +DEAT+++D+ + IQ Sbjct: 588 GRVEFENVHFSYADGRE-TLQDVSFTVMPGQTVALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQISLRSHIGVVPQDTVLFNDTIANNI-RYGRVTAGDSEIQAAAQAAGIHDAILSFPEGYETQVGERGLKLSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQ 766
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MESD_LEUME (Mesentericin-Y105 transport/processing ATP-binding protein mesD OS=Leuconostoc mesenteroides GN=mesD PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 4.505e-15 Identity = 48/158 (30.38%), Postives = 84/158 (53.16%), Query Frame = 3 Query: 102 ITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSN--IDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 569 ++L+I GEKI +VG +GSGKSTL+++ +P R +PQEP +F G++ N + + E+I +++E ++KD + + +A+SG N S GQ+Q + L R +L S +L +DE+T+++D T+ +I Sbjct: 508 VSLTITAGEKIALVGISGSGKSTLVKLLVNFFQPESGTISLGPTPLANLDKHELRGHINYLPQEPFIFSGSIMENLLLGAKPGTTQEDIIRAVEIAEIKDDIEKMSQGFGTELAESG-NISGGQKQRIALARAILVDSPVLILDESTSNLDVLTEKKI 664 HSP 2 Score: 21.557 bits (44), Expect = 4.505e-15 Identity = 11/37 (29.73%), Postives = 18/37 (48.65%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLE 714 TII +AHR+ D+ + + + E G LL+ Sbjct: 675 TIIFVAHRLTISQRVDRILTMQSGKIIEDGTHDTLLK 711
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_YERPS (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pseudotuberculosis GN=msbA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.745e-15 Identity = 50/188 (26.60%), Postives = 91/188 (48.40%), Query Frame = 3 Query: 30 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 A G+++ + Y L I + + G+ + +VGR+GSGKST+ + R + S R++ ++ Q LF TV +NI QYS EI ++ D + LD+++ ++G S GQRQ + + R +L++ +L +DEAT+++D++++ IQ + E Sbjct: 338 AKGDIEFRHVTFYYPGKDTPALNDINIHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDLRDYRLGALRNQVALVSQNVHLFNDTVANNIAYARNEQYSRAEIEEAARMAYAMDFINKMEHGLDTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDE 525
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_YERPN (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=msbA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.745e-15 Identity = 50/188 (26.60%), Postives = 91/188 (48.40%), Query Frame = 3 Query: 30 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 A G+++ + Y L I + + G+ + +VGR+GSGKST+ + R + S R++ ++ Q LF TV +NI QYS EI ++ D + LD+++ ++G S GQRQ + + R +L++ +L +DEAT+++D++++ IQ + E Sbjct: 338 AKGDIEFRHVTFYYPGKDTPALNDINIHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDLRDYRLGALRNQVALVSQNVHLFNDTVANNIAYARNEQYSRAEIEEAARMAYAMDFINKMEHGLDTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDE 525
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_YERPE (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pestis GN=msbA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.745e-15 Identity = 50/188 (26.60%), Postives = 91/188 (48.40%), Query Frame = 3 Query: 30 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 A G+++ + Y L I + + G+ + +VGR+GSGKST+ + R + S R++ ++ Q LF TV +NI QYS EI ++ D + LD+++ ++G S GQRQ + + R +L++ +L +DEAT+++D++++ IQ + E Sbjct: 338 AKGDIEFRHVTFYYPGKDTPALNDINIHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDLRDYRLGALRNQVALVSQNVHLFNDTVANNIAYARNEQYSRAEIEEAARMAYAMDFINKMEHGLDTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDE 525 The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 452
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bpback to top |