EY736163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_YERPA (Lipid A export ATP-binding/permease protein msbA OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=msbA PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.745e-15 Identity = 50/188 (26.60%), Postives = 91/188 (48.40%), Query Frame = 3 Query: 30 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 A G+++ + Y L I + + G+ + +VGR+GSGKST+ + R + S R++ ++ Q LF TV +NI QYS EI ++ D + LD+++ ++G S GQRQ + + R +L++ +L +DEAT+++D++++ IQ + E Sbjct: 338 AKGDIEFRHVTFYYPGKDTPALNDINIHLEAGKTVALVGRSGSGKSTIANLLTRFYDVSEGSILLDGHDLRDYRLGALRNQVALVSQNVHLFNDTVANNIAYARNEQYSRAEIEEAARMAYAMDFINKMEHGLDTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDE 525
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_RHILO (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium loti GN=ndvA PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 5.882e-15 Identity = 49/186 (26.34%), Postives = 92/186 (49.46%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 G+V D+ + +N+ + G++ + G+ + +VG TG+GK+TLI + R+ PS R + Q+ L ++ NI +G+ S+ EI + +D + AK D++V + G S G+RQ + + R +LK + +L +DEAT+++D +T+ ++ I E Sbjct: 333 GHVRFEDVGFEF-ANSGQGVSGVSFEVQAGQTVAIVGPTGAGKTTLINLLQRVFSPSTGRILIDGIDTRTVTRKSLRHSIATVFQDAGLLNRSIEDNIR-VGRADASNVEIHAAAVAAAAQDFILAKSGGYDTVVGERGGQLSGGERQRIAIARAVLKDAPILVLDEATSALDVETEDRVKEAIDE 516 HSP 2 Score: 25.409 bits (54), Expect = 5.882e-15 Identity = 13/35 (37.14%), Postives = 18/35 (51.43%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQL 708 T IAHR+ TV D D + +D E G ++L Sbjct: 522 TTFIIAHRLTTVRDADLVVFMDKGRVVEMGGFAEL 556
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: TAP1_GORGO (Antigen peptide transporter 1 OS=Gorilla gorilla gorilla GN=TAP1 PE=2 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 6.197e-15 Identity = 56/202 (27.72%), Postives = 100/202 (49.50%), Query Frame = 3 Query: 9 RPPPNW---PAH--GNVDLIDLQVRYRSNTP--LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNI--DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 R PP+ P H G V D+ Y N P LVL+G+T ++H GE +VG GSGKST+ + L +P+ + + QEP +F +++ NI + + EEI + +C ++ P D+ V ++G S GQRQ + L R +++ +L +D+AT+++D+ + ++++++ E Sbjct: 487 RCPPSGLLTPLHLEGLVQFQDVSFAY-PNRPDVLVLQGLTFTLHPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKCGAHSFISGLPQGYDTEVGEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYE 687
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_XANOR (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas oryzae pv. oryzae GN=msbA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15 Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = 3 Query: 30 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQL----KDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 A G ++ D+ RY L ++ G +VGR+GSGKS+LI++ R + R + ++ Q+ +LF+G++ N+ G+ + LER L + VA P+ L S V G S GQRQ L + R MLK + +L +DEATA++D++++ +Q Sbjct: 342 AKGLIEFRDVTARYPGQVNPALADVSFIAQPGTVTAIVGRSGSGKSSLIKLIPRFYDAEAGQILLDGQPVQAYALADLRRQIALVGQQVMLFDGSIAENV-AFGEMRSADA-SQLERAILGANAMEFVAQLPEGLQSHVGAKGGRLSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQ 524
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_XANOM (Lipid A export ATP-binding/permease protein msbA OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=msbA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15 Identity = 54/185 (29.19%), Postives = 89/185 (48.11%), Query Frame = 3 Query: 30 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQL----KDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 A G ++ D+ RY L ++ G +VGR+GSGKS+LI++ R + R + ++ Q+ +LF+G++ N+ G+ + LER L + VA P+ L S V G S GQRQ L + R MLK + +L +DEATA++D++++ +Q Sbjct: 342 AKGLIEFRDVTARYPGQVNPALADVSFIAQPGTVTAIVGRSGSGKSSLIKLIPRFYDAEAGQILLDGQPVQAYALADLRRQIALVGQQVMLFDGSIAENV-AFGEMRSADA-SQLERAILGANAMEFVAQLPEGLQSHVGAKGGRLSGGQRQRLAIARAMLKDAPILILDEATAALDNESERLVQ 524
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_ACIAD (Lipid A export ATP-binding/permease protein msbA OS=Acinetobacter sp. (strain ADP1) GN=msbA PE=3 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15 Identity = 48/170 (28.24%), Postives = 89/170 (52.35%), Query Frame = 3 Query: 93 LKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGV 593 +K L+I GE + +VGR+G+GK++L+ + R E + R + ++ Q+ VLF +VR NI GQ ++ +I + + D + P D+++ G N S GQRQ + + R +LK++ +L +DEAT+++D++++ IQ+ E + Sbjct: 351 IKDFNLTIEPGETVAIVGRSGAGKTSLVNLLVRFQEVTSGSLYLDHIPIQDIELSCLRQQVAMVNQQVVLFNRSVRENI-AYGQLEGAAEADIVAAAKAAYAHDFIMNLPQGYDTILGAQGLNLSGGQRQRIAIARAILKNAPILILDEATSALDNESEHFIQKAFDEAM 519
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MDL1_YEAST (ATP-dependent permease MDL1, mitochondrial OS=Saccharomyces cerevisiae GN=MDL1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15 Identity = 54/191 (28.27%), Postives = 87/191 (45.55%), Query Frame = 3 Query: 90 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNI----DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTD----AEIQRIIREGVCCLYNYQHCSQDTHS 638 + K + ++I GE + VG +GSGKST+ + R + + R G + QEP+LF GT+ NI P D+ I +++ + +A PD L ++V G S GQ+Q + L R L +L +DEAT+++DSQ++ +QR + G + S HS Sbjct: 449 IFKDLNITIKPGEHVCAVGPSGSGKSTIASLLLRYYDVNSGSIEFGDEDIRNFNLRKYRRLIGYVQQEPLLFNGTILDNILYCIPPEIAEQDDRIRRAIGKANCTKFLANFPDGLQTMVGARGAQLSGGQKQRIALARAFLLDPAVLILDEATSALDSQSEEIVAKNLQRRVERGFTTISIAHRLSTIKHS 639
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCB6_MOUSE (ATP-binding cassette sub-family B member 6, mitochondrial OS=Mus musculus GN=Abcb6 PE=1 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 8.093e-15 Identity = 43/162 (26.54%), Postives = 88/162 (54.32%), Query Frame = 3 Query: 93 LKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYS--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 L+ ++ ++ G+ + +VG +G+GKST++++ FR + S RS G++PQ+ VLF T+ +NI G+ + D E+ + + + D + + P+ ++ V + G S G++Q + + R +LK ++ +DEAT+++D+ + IQ Sbjct: 606 LQDVSFTVMPGQTVALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQISLRSHIGVVPQDTVLFNDTIANNI-RYGRVTAGDSEVEAAAQAAGIHDAILSFPEGYETQVGERGLKLSGGEKQRVAIARTILKAPDIILLDEATSALDTSNERAIQ 766
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: Y664_HAEIN (Probable ABC transporter ATP-binding protein HI0664 OS=Haemophilus influenzae GN=HI0664 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 9.946e-15 Identity = 47/179 (26.26%), Postives = 90/179 (50.28%), Query Frame = 3 Query: 39 NVDLIDLQ-VRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD-EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 569 +V ID++ V + +L ++LS+ GE +G+ GR+GSGKSTL+++ R +P R I Q+ +F T+ NI + + EEI ++ ++ + D + + P + + + G N S G++Q + + R L ++ ++ +DE T+++DS +A I Sbjct: 336 DVSRIDVENVNFAYGEEQILSDVSLSVKKGEILGIHGRSGSGKSTLLKLLMRFYDPKSGSIKINGETLPNINTCSLRDNMAYITQQTYIFNETIEENIRLARRDATLEEIMEAAKKASIHDFILSLPQGYQTKMTELGGNLSDGEKQRIGIARAFLHNAPIILLDEPTSNLDSLNEAMI 514 HSP 2 Score: 21.1718 bits (43), Expect = 9.946e-15 Identity = 8/21 (38.10%), Postives = 14/21 (66.67%), Query Frame = 1 Query: 607 IISIAHRIPTVMDCDKAIVVD 669 II ++HR T+ CD+ I ++ Sbjct: 527 IILVSHRQSTMAICDQVIGIE 547
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB17I_ARATH (ABC transporter I family member 17 OS=Arabidopsis thaliana GN=ABCI17 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 1.057e-14 Identity = 56/169 (33.14%), Postives = 83/169 (49.11%), Query Frame = 3 Query: 90 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNI----DPIGQ-YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 +LKG+T+ I G +GV+G +GSGKST ++ RL EP R R G++ Q PVLF+GTV N+ + G+ SDEE++K L L A K +G SVGQ Q + L R + +L +DE T+++D + I+ +I Sbjct: 44 ILKGVTIDIPKGMIVGVIGPSGSGKSTFLRSLNRLWEPPESTVFLDGEDITNVDVIALRRRVGMLFQLPVLFQGTVADNVRYGPNLRGEKLSDEEVYKLLSLADLDASFAKK----------TGAELSVGQAQRVALARTLANEPEVLLLDEPTSALDPISTENIEDVI 202 The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 452
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bpback to top |