EY736163

Overview
NameEY736163
Unique NameEY736163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: TAGC_DICDI (Serine protease/ABC transporter B family protein tagC OS=Dictyostelium discoideum GN=tagC PE=2 SV=2)

HSP 1 Score: 61.6178 bits (148), Expect = 2.760e-14
Identity = 40/186 (21.51%), Postives = 87/186 (46.77%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPL-VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVE-PSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR 584
            G ++  ++  RY +   + VL  I +    G+  G+VG +GSGKSTL+++  +                         R     + Q P LF+ +++ NI   +   + EE+ ++ +     + +   P + D+++  +G   S GQ++ + + R +    +++ +DE TA +D +++  I + I+
Sbjct: 1448 GEIEFKNVSFRYPTRPDVQVLHNINMKFETGKCYGLVGPSGSGKSTLLELISKFYPLRDGGNIIMDDIDIANIRPNNLRGFVTCVHQNPYLFDASIKDNIGYALDNPTIEEVIEAAKLAYAHEFIKDLPQQYDTVLGSAGSLLSGGQKKRIAIARAICAKRKIMLLDEITAELDPESEEAITQSIK 1633          

HSP 2 Score: 38.1206 bits (87), Expect = 2.760e-14
Identity = 14/38 (36.84%), Postives = 24/38 (63.16%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEK 717
            T++ +AH++  V DCDK  V+D  +  E G   +L+E+
Sbjct: 1640 TVVMVAHKVAAVRDCDKIFVLDKGYLVEEGTHDELMER 1677          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_AGRVI (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Agrobacterium vitis GN=ndvA PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.075e-14
Identity = 54/192 (28.12%), Postives = 98/192 (51.04%), Query Frame = 3
Query:   36 GNVDLI----DLQVRYRS----NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYS--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            GN DL     D++ R+ S    NT   +K ++ ++  G+ I +VG TG+GK+TLI +  R+ EP                    R+    + Q+  +   ++  NI  IG+ +  DE+I K+ E     D + ++    D+ V + G+  S G+RQ + + R +LK + +L +DEAT+++D +T+  ++  I
Sbjct:  324 GNRDLKSVRGDVEFRHVSFDFANTTQGVKDVSFTVKAGQTIAIVGPTGAGKTTLINLLQRVHEPQQGQILIDGADISTITRQSLRNSIATVFQDAGILNRSIADNIR-IGRENATDEDIVKAAEAAAATDFIESRLSGFDTDVGERGNRLSGGERQRIAIARAILKDAPILVLDEATSALDVETEERVKSAI 514          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: TAP1_MOUSE (Antigen peptide transporter 1 OS=Mus musculus GN=Tap1 PE=2 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 52/187 (27.81%), Postives = 90/187 (48.13%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPL-VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD--EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            G V+  D+   Y +   + VL+G+T ++H G    +VG  GSGKST+  +   L +P+                    ++   + QEP+LF  + R NI      +   EEI          D ++  P   D+ V ++G+  S GQRQ + L R +++   LL +D+AT+++D+     +QR++ E
Sbjct:  477 GLVEFQDVSFAYPNQPKVQVLQGLTFTLHPGTVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGQRLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLNRTPTMEEITAVAVESGAHDFISGFPQGYDTEVGETGNQLSGGQRQAVALARALIRKPLLLILDDATSALDAGNQLRVQRLLYE 663          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MDLA_ECOLI (Multidrug resistance-like ATP-binding protein mdlA OS=Escherichia coli (strain K12) GN=mdlA PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 51/186 (27.42%), Postives = 89/186 (47.85%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            G +D+   Q  Y       L+ +  ++  G+ +G+ G TGSGKSTL+ +  R  + S                   RSR  ++ Q P LF  TV +NI  +G    + +EI        + D +   P   D+ V + G   S GQ+Q + + R +L ++ +L +D+A ++VD +T+ +I   +R+
Sbjct:  333 GELDVNIHQFTYPQTDHPALENVNFALKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNI-ALGCPNATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLVNAEILILDDALSAVDGRTEHQILHNLRQ 517          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCB6_HUMAN (ATP-binding cassette sub-family B member 6, mitochondrial OS=Homo sapiens GN=ABCB6 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 4.017e-14
Identity = 43/162 (26.54%), Postives = 87/162 (53.70%), Query Frame = 3
Query:   93 LKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYS--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            L+ ++ ++  G+ + +VG +G+GKST++++ FR  + S                   RS  G++PQ+ VLF  T+  NI   G+ +  ++E+  + +   + D + A P+   + V + G   S G++Q + + R +LK   ++ +DEAT+++D+  +  IQ
Sbjct:  606 LQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFNDTIADNI-RYGRVTAGNDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQ 766          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MDLA_BUCBP (Multidrug resistance-like ATP-binding protein mdlA OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=mdlA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 4.777e-14
Identity = 49/169 (28.99%), Postives = 81/169 (47.93%), Query Frame = 3
Query:   66 RYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY-SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 569
            +Y  +   +LK I   I  G+ +G+ G TGSGKSTL+++  R +E                     R +  I+ Q   LF  T+ +NI     Y S +EI ++     L + +   P   ++ V + G   S GQ+Q + + R +L  S +L +D A +SVD++T+  I
Sbjct:  344 KYSKSNKTILKNINFKIRPGQILGICGPTGSGKSTLLKLIQRQIELYDGKISYHSIPITQFNIVEWRKKMSIVNQTTFLFSDTIANNIKLGKPYASQKEIEQATTFSDLHNDIMTFPQGYNTQVGERGIMLSGGQKQRISIARALLLKSEILILDNALSSVDNKTEINI 512          

HSP 2 Score: 22.3274 bits (46), Expect = 4.777e-14
Identity = 10/37 (27.03%), Postives = 21/37 (56.76%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLE 714
            TII   HR+ ++++ D  IV++     + G+   L++
Sbjct:  525 TIIMCTHRLSSLINSDLIIVIENGSITQIGKHKLLIQ 561          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NIST_LACLA (Nisin transport ATP-binding protein nisT OS=Lactococcus lactis subsp. lactis GN=nisT PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 54/184 (29.35%), Postives = 86/184 (46.74%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNI---DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVAD---SGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 569
            G V +I+L   Y ++    LK I LS   GE   +VG+ GSGKSTL+++   L +P+                   +    ++ Q+ V +E T+R NI   D   Q+ DE+I K L+   L  +       LD+ + +    G   S GQ Q + L R   K + +  +DE +A++D   + EI
Sbjct:  350 GTVKVINLSYVYPNSNAFALKNINLSFEKGELTAIVGKNGSGKSTLVKIISGLYQPTMGIIQYDKMRSSLMPEEFYQKNISVLFQDFVKYELTIRENIGLSDLSSQWEDEKIIKVLDNLGLDFLKTNNQYVLDTQLGNWFQEGHQLSGGQWQKIALARTFFKKASIYILDEPSAALDPVAEKEI 533          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: AB8B_ARATH (Putative ABC transporter B family member 8 OS=Arabidopsis thaliana GN=ABCB8 PE=5 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 50/183 (27.32%), Postives = 92/183 (50.27%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTP--LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIG--QYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            G ++L ++   Y  N P  LVL+  +L I  G  IG+VG +G GKST+I +  R  +                     R    ++ QEPV++ G+++ NI  +G  + +++E+ ++ +     D ++A      +   + G   S GQ+Q + + R  L+   +L +DE T+S+DS ++ E+Q
Sbjct:  996 GRIELKNIDFSY-PNRPSILVLRDFSLDIKPGTSIGLVGTSGCGKSTVIALIQRFYDVEIGCVKIDSENLRDINIKWYRKHTALVSQEPVVYSGSIQDNII-LGRPEATEDEVVEAAKAANAHDFISAMEKGYKTECGERGVQLSGGQKQRIAIARAFLRSPIILLLDEVTSSLDSNSEQEVQ 1176          

HSP 2 Score: 72.4034 bits (176), Expect = 3.759e-12
Identity = 44/190 (23.16%), Postives = 91/190 (47.89%), Query Frame = 3
Query:   18 PNWPAHGNVDLIDLQVRYRSNTP-LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            P     G V+   + + Y S    ++LK  TL++  G+ + ++G +GSGKST+I +  R  +P                    R   G++ Q+  LF  ++  N+     + S +E+  + +       +   P+  D+ + + G   S GQ+Q + + R ++++  +L +DEAT+++D +++  IQ  +
Sbjct:  352 PGEKMKGRVEFERVTLVYLSRPETIILKDFTLTVDVGQSVALMGASGSGKSTVIALLQRFYDPCEGFVRIDGFDIKTLQLKWMRQHIGVVSQDHALFGTSIMENLMFGKNKASMDEVISAAKAANAHGFITQLPNGYDTHIGNRGALLSGGQKQRIAIARAIIRNPVILLLDEATSALDGESETLIQNAL 541          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_RHOP2 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhodopseudomonas palustris (strain HaA2) GN=ndvA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 6.199e-14
Identity = 51/186 (27.42%), Postives = 91/186 (48.92%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            G V+  D+   Y    P V + ++ +   G+ I +VG TG+GKST I +  R  +P                    R   G++ QE +LF+ ++  N+  +G+   +D E+  + ER Q  D +       ++   + G   S G+RQ L + R +LK   +L +DEAT+++D+ T+A++   + E
Sbjct:  343 GLVEFQDVSFSYDGKRPAV-EDLSFTALPGQTIALVGATGAGKSTAIALLHRAFDPQSGTVKIDGMDIRGLTLAGLRRNIGVVFQEALLFDRSIADNLR-VGKPDATDAELRLAAERAQALDFIERSGLGFNTAAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEAKVNLALDE 526          

HSP 2 Score: 20.7866 bits (42), Expect = 6.199e-14
Identity = 10/30 (33.33%), Postives = 15/30 (50.00%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESG 693
            T   IAHR+ T+    + +V +     ESG
Sbjct:  532 TTFVIAHRLSTIRHATRILVFENGRVIESG 561          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_DECAR (Lipid A export ATP-binding/permease protein msbA OS=Dechloromonas aromatica (strain RCB) GN=msbA PE=3 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.851e-14
Identity = 48/188 (25.53%), Postives = 92/188 (48.94%), Query Frame = 3
Query:   30 AHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD--EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            A G V+   +   Y  +    L  ++L++  GE + +VG +GSGK+T   +  R                        R    ++ Q+ VLF  T+ +NI   G+     +EI  + +     + + A P+ L++++ ++G   S GQRQ L + R +LK + +L +DEAT+++D++++  +Q  + E
Sbjct:  337 AQGLVEFDGVTFTYPGSERPALDSVSLTVRPGECVALVGPSGSGKTTAANLLPRFYALDAGEIRVDGHALPNIRLNSLRDNIALVSQDVVLFNDTIGANIAYGGKRDATLDEIRAAAKAAHALEFIDALPEGLNTMIGENGVKLSGGQRQRLAIARAILKDAPILILDEATSALDTESERHVQAALDE 524          
The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
TAGC_DICDI2.760e-1421.51Serine protease/ABC transporter B family protein t... [more]
NDVA_AGRVI3.075e-1428.13Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
TAP1_MOUSE4.017e-1427.81Antigen peptide transporter 1 OS=Mus musculus GN=T... [more]
MDLA_ECOLI4.017e-1427.42Multidrug resistance-like ATP-binding protein mdlA... [more]
ABCB6_HUMAN4.017e-1426.54ATP-binding cassette sub-family B member 6, mitoch... [more]
MDLA_BUCBP4.777e-1428.99Multidrug resistance-like ATP-binding protein mdlA... [more]
NIST_LACLA5.246e-1429.35Nisin transport ATP-binding protein nisT OS=Lactoc... [more]
AB8B_ARATH5.246e-1427.32Putative ABC transporter B family member 8 OS=Arab... [more]
NDVA_RHOP26.199e-1427.42Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
MSBA_DECAR6.851e-1425.53Lipid A export ATP-binding/permease protein msbA O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGTCCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTC
ATAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGG
TATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTA
CAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAG
CCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTCATTGTTGGG
GCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCC
TTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCA
GATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGT
AGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACA
ACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGTTATGCTA
AAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTC
ACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGGAGTCTGCTGCC
TGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGATTGTGA
TAAAGCTATAGTCGTTGATGCACGATGGGCGAAAGAATCTGGCGAGCCAT
CCCAGTTGCTTGAAAAGCCATCACTCTCCGCAGCATCGGTGGAAGAATTA
CCCAACCACACCATCAAACTGGACGAACGTATCCCTTGGACTCGATCGCG
GGTCGAACCGACGTTCCGGTGAAGGAAGCCCGTTATATATACAAGTTAGT
GTTCTGTCGCTGGCACAATCCCTT
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