EY736163

Overview
NameEY736163
Unique NameEY736163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_RHIL3 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=ndvA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.948e-14
Identity = 46/184 (25.00%), Postives = 93/184 (50.54%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            G ++  D+   +  N+   L  ++ S+  G+ + +VG TG+GK+TL+ +  R+ +                     R     + Q+  L   ++  NI  +G+   S+EE+ ++ E     D +  + D+ D+ V + G+  S G+RQ + + R +LK + +L +DEAT+++D +T+A ++  I
Sbjct:  333 GAIEFRDVSFGF-GNSSQGLHNVSFSVKAGQTVAIVGPTGAGKTTLVNLLQRVYDAQGGKILVDGTDITKVTRKSLRRHIATVFQDAGLLNRSISDNIR-LGREGASEEEMRRAAEAAAAADFIETREDRYDTHVGERGNKLSGGERQRIAIARAILKDAPILVLDEATSALDVETEARVKAAI 514          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: COMA_STRR6 (Transport/processing ATP-binding protein comA OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=comA PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 8.948e-14
Identity = 47/163 (28.83%), Postives = 81/163 (49.69%), Query Frame = 3
Query:   90 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 569
            VL  I L++  G K+  VG +GSGK+TL ++     +PS                   R     +PQ+P +F GT+  N+  +G     + E+I +++E  ++++ +   P    + +   G   S GQRQ + L R +L  + +L +DEAT+S+D  T+  I
Sbjct:  499 VLSDINLTVPQGSKVAFVGISGSGKTTLAKMMVNFYDPSQGEISLGGVNLNQIDKKALRQYINYLPQQPYVFNGTILENL-LLGAKEGTTQEDILRAVELAEIREDIERMPLNYQTELTSDGAGISGGQRQRIALARALLTDAPVLILDEATSSLDILTEKRI 660          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_BLOPB (Lipid A export ATP-binding/permease protein msbA OS=Blochmannia pennsylvanicus (strain BPEN) GN=msbA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.169e-13
Identity = 51/183 (27.87%), Postives = 90/183 (49.18%), Query Frame = 3
Query:   36 GNVDLIDLQVRY-RSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQR 575
            G++   D+   Y   NTP + K I  SI  G+ + +VGR+GSGKST++ +  R  +                     R++  ++ Q   LF  T+ +NI    +  YS E I  +       D ++   + LD+++ ++G   S GQRQ + + R +L+   +L  DEAT+++DS ++  I +
Sbjct:  342 GHIIFDDVTFFYPEKNTPSLYK-INFSIESGKTVALVGRSGSGKSTIVNLLTRFYDIDKGRILLDGFNLNDYKLASLRNQIAMVSQNVHLFNDTIANNIAYARRNFYSRESIETAARMACAMDFISQMKNGLDTIIGENGILLSSGQRQRIAIARALLRDCPILIFDEATSALDSASEHIIHK 523          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MDLA_BUCAI (Multidrug resistance-like ATP-binding protein mdlA OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=mdlA PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.169e-13
Identity = 53/192 (27.60%), Postives = 94/192 (48.96%), Query Frame = 3
Query:   18 PNWPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            P +P   N+++   +  Y +N    LK I + I  G  +G+ G TGSGKSTL+ +  R                        R R  ++ Q   LF  T+ +NI  +G+   S +EI +  +   +   +   P++ ++ V + G   S GQ+Q +C+ R +L ++ +L +D+A ++VD+QT+  I + I E
Sbjct:  329 PPYPGILNINI--KKFYYPNNQKPSLKDIRILIKPGNTLGICGPTGSGKSTLLMLIQRQFNFKKEEIHYHSLSLLEIKIDDWRRRIAVVNQTSFLFSDTISNNIS-LGKPNASQKEIEEVAKLADVHKDIIDLPERYETQVGERGVMLSGGQKQRVCIARALLLNAEILILDDALSAVDAQTENNILKNINE 517          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_RHIRD (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium radiobacter GN=ndvA PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.766e-13
Identity = 42/171 (24.56%), Postives = 88/171 (51.46%), Query Frame = 3
Query:   75 SNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYS--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            +NT   +  ++ +   GE + +VG TG+GK+TLI +  R+ +P                    R+    + Q+  L   ++R NI  +G+ +  D E+ ++       D + ++ +   + V + G+  S G+RQ + + R +LK++ +L +DEAT+++D +T+A ++  +
Sbjct:  345 ANTKQGVHDVSFTAKAGETVAIVGPTGAGKTTLINLLQRVYDPDSGQILIDGTDISTVTKNSLRNSIATVFQDAGLLNRSIRENIR-LGRETATDAEVVEAAAAAAATDFIDSRINGYLTQVGERGNRLSGGERQRIAIARAILKNAPILVLDEATSALDVETEARVKAAV 514          

HSP 2 Score: 25.7942 bits (55), Expect = 1.766e-13
Identity = 13/38 (34.21%), Postives = 19/38 (50.00%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEK 717
            T   IAHR+ TV D D  + +D     E G   +L ++
Sbjct:  522 TTFIIAHRLSTVRDADLVLFLDQGRIIEKGTFDELTQR 559          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_AGRT5 (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=ndvA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.766e-13
Identity = 42/171 (24.56%), Postives = 88/171 (51.46%), Query Frame = 3
Query:   75 SNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYS--DEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            +NT   +  ++ +   GE + +VG TG+GK+TLI +  R+ +P                    R+    + Q+  L   ++R NI  +G+ +  D E+ ++       D + ++ +   + V + G+  S G+RQ + + R +LK++ +L +DEAT+++D +T+A ++  +
Sbjct:  345 ANTKQGVHDVSFTAKAGETVAIVGPTGAGKTTLINLLQRVYDPDSGQILIDGTDISTVTKNSLRNSIATVFQDAGLLNRSIRENIR-LGRETATDAEVVEAAAAAAATDFIDSRINGYLTQVGERGNRLSGGERQRIAIARAILKNAPILVLDEATSALDVETEARVKAAV 514          

HSP 2 Score: 25.7942 bits (55), Expect = 1.766e-13
Identity = 13/38 (34.21%), Postives = 19/38 (50.00%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEK 717
            T   IAHR+ TV D D  + +D     E G   +L ++
Sbjct:  522 TTFIIAHRLSTVRDADLVLFLDQGRIIEKGTFDELTQR 559          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_HAES1 (Lipid A export ATP-binding/permease protein msbA OS=Haemophilus somnus (strain 129Pt) GN=msbA PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.993e-13
Identity = 47/181 (25.97%), Postives = 89/181 (49.17%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID--PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            G V   ++   Y       L  I+ +I  G+ + +VGR+GSGKST+  +  R  +                     R    ++ Q+  LF  T+ +NI      + + E+I ++ E     + +    + LD+++ ++G + S GQRQ L + R +L+ S +L +DEAT+++D++++  IQ
Sbjct:  340 GEVRFENVTFSYSGKEHPALNNISFTIPQGKTVALVGRSGSGKSTIANLVTRFYDVEQGKITLDGVNIQDYTLANLREHCAVVSQQVHLFNDTIANNIAYAVTEKCTREQIIEAAEAAYAMEFIEKLENGLDTVIGENGASLSGGQRQRLAIARALLRDSPVLILDEATSALDTESERAIQ 520          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_BRAJA (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Bradyrhizobium japonicum GN=ndvA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.292e-13
Identity = 48/186 (25.81%), Postives = 91/186 (48.92%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            G V+  D+   Y    P V + ++ +   G+ + +VG TG+GKST I +  R  +P                    R   G++ QE +LF  ++  N+  +G+   ++ E+ K+ ER Q  + +  +    ++   + G   S G+RQ L + R +LK   +L +DEAT+++D+ T+ ++   + E
Sbjct:  338 GLVEFNDVTFSYDGKRPAV-EDLSFTALPGQTVALVGPTGAGKSTAIALLHRAFDPQSGFIRIDGMDVRGVTLTSLRRNIGVVFQEALLFNRSIAENLR-VGKPDATEAEMRKAAERAQALEFIE-RSGGFETNAGERGRMLSGGERQRLSIARALLKDPPILILDEATSALDAVTEVKVNAALDE 520          

HSP 2 Score: 25.0238 bits (53), Expect = 2.292e-13
Identity = 13/52 (25.00%), Postives = 24/52 (46.15%), Query Frame = 1
Query:  562 LKFKGSFERESAACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEK 717
            +K   + +      T   IAHR+ T+ +  + +V +     ESG   +L+ K
Sbjct:  512 VKVNAALDEVMRGRTTFVIAHRLATIRNATRILVFENGRVTESGTFDELVAK 563          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: APRD_PSEAE (Alkaline protease secretion ATP-binding protein aprD OS=Pseudomonas aeruginosa GN=aprD PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.293e-13
Identity = 44/164 (26.83%), Postives = 77/164 (46.95%), Query Frame = 3
Query:   93 LKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIR 584
            L+G+TL+I  G  +GV+G +GSGKS+L +V   +                         R G +PQ+  LF GTV  NI   G+   +++ ++     + ++V   P   D+++   G   S GQRQ + L R +     L+ +DE  +++D   +  +   I+
Sbjct:  349 LRGLTLAIPAGSVVGVIGPSGSGKSSLARVVLGIWPTLHGSVRLDGAEIRQYERETLGPRIGYLPQDIELFAGTVAENIARFGEVQADKVVEAARLAGVHELVLRLPQGYDTVLGVGGAGLSGGQRQRIALARALYGAPTLVVLDEPNSNLDDSGEQALLAAIQ 512          

HSP 2 Score: 23.8682 bits (50), Expect = 2.293e-13
Identity = 11/41 (26.83%), Postives = 21/41 (51.22%), Query Frame = 1
Query:  589 ESAACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLL 711
            ++  CT++ I HR   +   D+ + ++A      GE  Q+L
Sbjct:  515 KARGCTVLLITHRAGVLGCADRLLALNAGQLHLYGERDQVL 555          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PRTD_ERWCH (Proteases secretion ATP-binding protein prtD OS=Erwinia chrysanthemi GN=prtD PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.603e-13
Identity = 50/183 (27.32%), Postives = 88/183 (48.09%), Query Frame = 3
Query:   33 HGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            H +V+ + L+   + NT L  + I  S+  GE + ++G +GSGKS+L ++      P+                       G +PQ+  LF+G++  NI   G    E++  + +   + +++ + P+  D+ + D G   S GQRQ + L R M     LL +DE  AS+DS+ D  + + I
Sbjct:  330 HLSVEQVSLRTA-QGNTRL--QNIHFSLQAGETLVILGASGSGKSSLARLLVGAQSPTQGKVRLDGADLNQVDKNTFGPTIGYLPQDVQLFKGSLAENIARFGDADPEKVVAAAKLAGVHELILSLPNGYDTELGDGGGGLSGGQRQRIGLARAMYGDPCLLILDEPNASLDSEGDQALMQAI 509          
The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
NDVA_RHIL38.948e-1425.00Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
COMA_STRR68.948e-1428.83Transport/processing ATP-binding protein comA OS=S... [more]
MSBA_BLOPB1.169e-1327.87Lipid A export ATP-binding/permease protein msbA O... [more]
MDLA_BUCAI1.169e-1327.60Multidrug resistance-like ATP-binding protein mdlA... [more]
NDVA_RHIRD1.766e-1324.56Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
NDVA_AGRT51.766e-1324.56Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
MSBA_HAES11.993e-1325.97Lipid A export ATP-binding/permease protein msbA O... [more]
NDVA_BRAJA2.292e-1325.81Beta-(1-->2)glucan export ATP-binding/permease pro... [more]
APRD_PSEAE2.293e-1326.83Alkaline protease secretion ATP-binding protein ap... [more]
PRTD_ERWCH2.603e-1327.32Proteases secretion ATP-binding protein prtD OS=Er... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGTCCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTC
ATAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGG
TATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTA
CAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAG
CCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTCATTGTTGGG
GCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCC
TTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCA
GATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGT
AGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACA
ACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGTTATGCTA
AAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTC
ACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGGAGTCTGCTGCC
TGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGATTGTGA
TAAAGCTATAGTCGTTGATGCACGATGGGCGAAAGAATCTGGCGAGCCAT
CCCAGTTGCTTGAAAAGCCATCACTCTCCGCAGCATCGGTGGAAGAATTA
CCCAACCACACCATCAAACTGGACGAACGTATCCCTTGGACTCGATCGCG
GGTCGAACCGACGTTCCGGTGAAGGAAGCCCGTTATATATACAAGTTAGT
GTTCTGTCGCTGGCACAATCCCTT
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