EY736163

Overview
NameEY736163
Unique NameEY736163
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MAM1_SCHPO (Mating factor M secretion protein mam1 OS=Schizosaccharomyces pombe GN=mam1 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.603e-13
Identity = 51/200 (25.50%), Postives = 97/200 (48.50%), Query Frame = 3
Query:   24 WPAHGNVDLIDLQVRYRSN--TPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYNYQH 617
            +P  G ++   +   Y  +    L L  ++LSI   EK+ +VG +GSGKSTL+++  R   PS                   + +  I+ Q+P L   T+  ++          +  +L++  + +V+   P+ LD+ + +   N+S GQ Q L   R +L++ RLL +DE T+++DS++   +++ I+   C +    H
Sbjct: 1093 FPLVGKIEFDGVSFAYPDSERNHLALNNVSLSIEAREKVAIVGISGSGKSTLVELL-RKTYPSEDIYIDGYPLTNIDTNWLLK-KVAIVDQKPHLLGSTILESLLYGVDRDINSVMDALDKTYMTEVIQNLPNGLDTPLLEFSKNFSGGQIQRLAFARALLRNPRLLILDECTSALDSKSSLLLEKTIQNLSCTVLIITH 1290          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PEDD_PEDAC (Pediocin PA-1 transport/processing ATP-binding protein pedD OS=Pediococcus acidilactici GN=pedD PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 2.963e-13
Identity = 48/181 (26.52%), Postives = 89/181 (49.17%), Query Frame = 3
Query:   42 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXX--RSRFGIIPQEPVLFEGTVRSNIDPIGQ---YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 569
            V+ +     Y SN   +L+ ++L+I   +KI +VG +GSGK+TL ++     EP                      R     +PQEP +F G+V  N+  +G     + + I ++    ++K  +   P    + +++SG N S GQ+Q L + R +L  ++    DE+T+++D+ T+ +I
Sbjct:  488 VNHVSFNYGYCSN---ILEDVSLTIPHHQKITIVGMSGSGKTTLAKLLVGFFEPQEQHGEIQINHHNISDISRTILRQYINYVPQEPFIFSGSVLENL-LLGSRPGVTQQMIDQACSFAEIKTDIENLPQGYHTRLSESGFNLSGGQKQRLSIARALLSPAQCFIFDESTSNLDTITEHKI 664          

HSP 2 Score: 29.261 bits (64), Expect = 2.963e-13
Identity = 15/36 (41.67%), Postives = 19/36 (52.78%), Query Frame = 1
Query:  604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLL 711
            TII +AHR+      DK +V+D     E G   QLL
Sbjct:  675 TIIFVAHRLNIASQTDKVVVLDHGKIVEQGSHRQLL 710          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PHNC_ALCFA (Phosphonates import ATP-binding protein phnC OS=Alcaligenes faecalis GN=phnC PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.400e-13
Identity = 63/191 (32.98%), Postives = 94/191 (49.21%), Query Frame = 3
Query:   42 VDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS---XXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEG-TVRSNIDPIGQYSDEEIWKS-LERCQLKDVVAA----KPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            +++ +LQ  Y S     LKG+ LS+  GE +G++G +G+GKSTLI+   RLVEPS                      R R G+I QE  L E  TV  N+   G+      W S   R   +D+  A    +   LD +     D  S GQRQ + + R +++   LL +DE TAS+D +T  ++ R++ E
Sbjct:    2 LEIHNLQKSY-STGDKALKGVNLSVQPGELLGLIGPSGAGKSTLIRCVNRLVEPSEGRVLLNGKDLANLGRHDLRMARRRIGMIFQEYALVERLTVMENL-LSGRLGYSGFWPSWFRRFSPEDIRLAYALLERVGLDGMHNKRADALSGGQRQRVGIARALMQKPDLLLVDEPTASLDPKTSRQVMRLVLE 190          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MDLA_BUCAP (Multidrug resistance-like ATP-binding protein mdlA OS=Buchnera aphidicola subsp. Schizaphis graminum GN=mdlA PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.400e-13
Identity = 47/175 (26.86%), Postives = 90/175 (51.43%), Query Frame = 3
Query:   69 YRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            Y  N    LK I LS++ G+ +G+ G TG+GKSTL+++  R  +                     RS+ G++ Q   LF  ++ +NI  +G+   S +EI K+ +   +   +   P   ++ V + G   S GQ+Q + + R +L ++ +L +D+A ++VD +T+  I + +++
Sbjct:  344 YPKNKKPSLKNIYLSLNPGKTLGICGPTGAGKSTLLKLIQRQFKIHKGEILYNSSSLLELKIDYWRSKIGVVNQTSFLFSDSISNNIS-LGKPKASQKEIEKAAKLADIHKDIVCLPQGYNTQVGERGVMLSGGQKQRIAIARALLLNTEILILDDALSAVDGKTENNILKNLKK 517          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_SODGM (Lipid A export ATP-binding/permease protein msbA OS=Sodalis glossinidius (strain morsitans) GN=msbA PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.441e-13
Identity = 45/165 (27.27%), Postives = 83/165 (50.30%), Query Frame = 3
Query:   93 LKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581
            L  I+LSI  G  + +VGR+GSGKST+  +  R  +                     R++  ++ Q   LF  T+ +NI    +  YS ++I  +       D +      LD+++ ++G   S GQRQ + + R +L+   +L +DEAT+++D++++  IQ+ +
Sbjct:  359 LHDISLSIPTGHTVALVGRSGSGKSTIANLLTRFYDIQQGQILLDGTDLRAYKLASLRNQVALVSQNVHLFNDTIANNIAYARKATYSRKQIENAARMAYAMDFIEKMDQGLDTVIGENGVLLSGGQRQRIAIARALLRDCPILILDEATSALDTESERAIQKAL 523          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPA (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila (strain Paris) GN=msbA PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.800e-13
Identity = 49/186 (26.34%), Postives = 90/186 (48.39%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            G ++   +   YR +   +L  +   I  G  + +VG +GSGK+T+  +  R  E S                   R +  ++ Q   LF  T+ +NI   G++  S E+I  + +     + +   PD  D+ V ++G   S GQRQ + + R +LK + +L +DEAT+++DS+++  IQ  + +
Sbjct:  340 GEIEFKHVYHAYRQSQN-ILHDVNFVIEAGTSVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQISLVSQNVTLFNDTLANNI-AYGRFDASREQIITAAKLAYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQ 523          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: Y742_STRCO (Uncharacterized ABC transporter ATP-binding protein SCO0742 OS=Streptomyces coelicolor GN=SCO0742 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.575e-13
Identity = 49/200 (24.50%), Postives = 94/200 (47.00%), Query Frame = 3
Query:    3 RVRPPPNWPAHG----NVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKS-LERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            + RP P  P+ G    +V   +++ RY  + P +  G++  +        VG +G+GK+T+  +  R  +P                    R+  G + Q+  +  G++R N+       DE    + L+  +L  +V   P+ L++LV   G   S G+RQ + + R +L+  RLL +DEAT+ +D+  +A ++  + +
Sbjct:  326 QARPVP-LPSAGAPPASVSFREVRFRYADDLPYIHHGVSFEVPARGMTAFVGPSGAGKTTVFSLVERFYDPDSGEITLDGRSLGDWELSSLRASIGYVEQDAPVLSGSLRDNLLLGNPEGDEATLAAVLKTTRLDGLVERLPNGLETLVGHRGTKLSGGERQRVAIARALLRRPRLLLLDEATSQLDAVNEAALRDTVAD 524          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_PSE14 (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=msbA PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.575e-13
Identity = 53/185 (28.65%), Postives = 85/185 (45.95%), Query Frame = 3
Query:   36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD------EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572
            G++++ +L   Y      VL  I+ S   G+ I +VGR+GSGKSTL  +  R                        R     + Q   LF  T+ +NI     Y D       +I  +      K+ +   P   D+ V ++G   S GQRQ L + R +LK++ LL +DEAT+++D++++  IQ
Sbjct:  351 GHLEVKNLSFFYPQTERQVLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHEMGNILLDGVEINDYRLRNLRKHIAQVNQNVTLFNDTIANNI----AYGDLAGAPRADIEAAAADAYAKEFIDQLPQGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQ 531          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPL (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila (strain Lens) GN=msbA PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.575e-13
Identity = 46/168 (27.38%), Postives = 83/168 (49.40%), Query Frame = 3
Query:   90 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            +L  +   I  G  + +VG +GSGK+T+  +  R  E S                   R +  ++ Q   LF  T+ +NI   G++  S E+I  + +     + +   PD  D+ V ++G   S GQRQ + + R +LK + +L +DEAT+++DS+++  IQ  + +
Sbjct:  357 ILHDVNFVIEAGTSVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQMSLVSQNVTLFNDTLANNI-AYGRFDASREQIITAAKLAYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQ 523          
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_LEGPH (Lipid A export ATP-binding/permease protein msbA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=msbA PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.575e-13
Identity = 46/168 (27.38%), Postives = 83/168 (49.40%), Query Frame = 3
Query:   90 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587
            +L  +   I  G  + +VG +GSGK+T+  +  R  E S                   R +  ++ Q   LF  T+ +NI   G++  S E+I  + +     + +   PD  D+ V ++G   S GQRQ + + R +LK + +L +DEAT+++DS+++  IQ  + +
Sbjct:  357 ILHDVNFVIEAGTSVALVGHSGSGKTTIASLLPRFYELSQGMITLDGMPIQQLSLESLRKQMSLVSQNVTLFNDTLANNI-AYGRFDASREQIITAAKLAYADEFIKQLPDGYDTRVGENGVLLSGGQRQRIAIARAILKDAPILILDEATSALDSESEHYIQAALEQ 523          
The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 452
Match NameE-valueIdentityDescription
MAM1_SCHPO2.603e-1325.50Mating factor M secretion protein mam1 OS=Schizosa... [more]
PEDD_PEDAC2.963e-1326.52Pediocin PA-1 transport/processing ATP-binding pro... [more]
PHNC_ALCFA3.400e-1332.98Phosphonates import ATP-binding protein phnC OS=Al... [more]
MDLA_BUCAP3.400e-1326.86Multidrug resistance-like ATP-binding protein mdlA... [more]
MSBA_SODGM4.441e-1327.27Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_LEGPA5.800e-1326.34Lipid A export ATP-binding/permease protein msbA O... [more]
Y742_STRCO7.575e-1324.50Uncharacterized ABC transporter ATP-binding protei... [more]
MSBA_PSE147.575e-1328.65Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_LEGPL7.575e-1327.38Lipid A export ATP-binding/permease protein msbA O... [more]
MSBA_LEGPH7.575e-1327.38Lipid A export ATP-binding/permease protein msbA O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-F12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bp
CACGCGTCCGTCCACCTCCAAATTGGCCTGCTCATGGCAATGTGGACCTC
ATAGACTTGCAGGTCAGATATCGCTCCAACACTCCTCTGGTTCTCAAAGG
TATTACACTCAGCATTCACGGGGGAGAGAAGATTGGTGTAGTTGGGCGTA
CAGGAAGTGGGAAGTCAACTTTAATTCAAGTTTTCTTTAGGCTGGTGGAG
CCTTCAGGAGGGAGAATCATTATTGATGGAATCGACATTTCATTGTTGGG
GCTTCATGACCTAAGGTCTCGCTTTGGGATCATTCCTCAAGAACCTGTCC
TTTTTGAAGGAACTGTGAGAAGCAACATTGATCCAATTGGTCAGTATTCA
GATGAAGAAATCTGGAAGAGCCTCGAGCGATGTCAACTTAAAGATGTGGT
AGCTGCAAAGCCTGATAAACTCGATTCTTTAGTGGCCGATAGTGGTGACA
ACTGGAGCGTGGGACAAAGGCAGCTTCTTTGTCTGGGAAGGGTTATGCTA
AAGCACAGCCGGCTCTTGTTTATGGATGAGGCGACGGCTTCTGTTGATTC
ACAAACTGATGCTGAAATTCAAAGGATCATTCGAGAGGGAGTCTGCTGCC
TGTACAATTATCAGCATTGCTCACAGGATACCCACAGTCATGGATTGTGA
TAAAGCTATAGTCGTTGATGCACGATGGGCGAAAGAATCTGGCGAGCCAT
CCCAGTTGCTTGAAAAGCCATCACTCTCCGCAGCATCGGTGGAAGAATTA
CCCAACCACACCATCAAACTGGACGAACGTATCCCTTGGACTCGATCGCG
GGTCGAACCGACGTTCCGGTGAAGGAAGCCCGTTATATATACAAGTTAGT
GTTCTGTCGCTGGCACAATCCCTT
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