EY736163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: COMA_STRPN (Transport/processing ATP-binding protein comA OS=Streptococcus pneumoniae GN=comA PE=3 SV=3) HSP 1 Score: 74.7146 bits (182), Expect = 7.575e-13 Identity = 46/163 (28.22%), Postives = 80/163 (49.08%), Query Frame = 3 Query: 90 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY---SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEI 569 VL I L++ G K+ VG +GSGK+TL ++ +PS R + Q+P +F GT+ N+ +G + E+I +++E ++++ + P + + G S GQRQ + L R +L + +L +DEAT+S+D T+ I Sbjct: 499 VLSDINLTVPQGSKVAFVGISGSGKTTLAKMMVNFYDPSQGEISLGSVNLNQIDKKALRQYINYLSQQPYVFNGTILENL-LLGAKEGTTQEDILRAVELAEIREDIERMPLNYQTELTSDGAGISGGQRQRIALARALLTDAPVLILDEATSSLDILTEKRI 660
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCB9_MOUSE (ATP-binding cassette sub-family B member 9 OS=Mus musculus GN=Abcb9 PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.093e-12 Identity = 41/184 (22.28%), Postives = 84/184 (45.65%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPL-VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 G VD ++ YR+ VL+ ++ S+ G+ +VG +GSGKS+ + + ++ QEPVLF ++ NI + E + ++ ++ + D + + G S GQ+Q + + R ++++ +L +DEAT+++D++++ IQ+ I Sbjct: 498 GRVDFENVTFTYRTRPHTQVLQNVSFSLSPGKVTALVGPSGSGKSSCVNILENFYPLQGGRVLLDGKPIGAYDHKYLHRVISLVSQEPVLFARSITDNISYGLPTVPFEMVVEAAQKANAHGFIMELQDGYSTETGEKGAQLSGGQKQRVAMARALVRNPPVLILDEATSALDAESEYLIQQAI 681 HSP 2 Score: 32.3426 bits (72), Expect = 1.093e-12 Identity = 21/69 (30.43%), Postives = 33/69 (47.83%), Query Frame = 1 Query: 604 TIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKLDERIPWTRSRVEP 810 T++ IAHR+ TV +V+D + G QLL + L A V+ + L+ + +T S EP Sbjct: 689 TVLIIAHRLSTVERAHLIVVLDKGRVVQQGTHQQLLAQGGLYAKLVQ---RQMLGLEHPLDYTASHKEP 754
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: TAP1_HUMAN (Antigen peptide transporter 1 OS=Homo sapiens GN=TAP1 PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12 Identity = 54/202 (26.73%), Postives = 98/202 (48.51%), Query Frame = 3 Query: 9 RPPPNW---PAH--GNVDLIDLQVRYRSNTP--LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNI--DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 R PP+ P H G V D+ Y N P LVL+G+T ++ GE +VG GSGKST+ + L +P+ + + QEP +F +++ NI + + EEI + + ++ P D+ V ++G S GQRQ + L R +++ +L +D+AT+++D+ + ++++++ E Sbjct: 547 RCPPSGLLTPLHLEGLVQFQDVSFAY-PNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQENIAYGLTQKPTMEEITAAAVKSGAHSFISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQLLYE 747
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PHNC1_RHOPB (Phosphonates import ATP-binding protein phnC 1 OS=Rhodopseudomonas palustris (strain BisB18) GN=phnC1 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12 Identity = 60/196 (30.61%), Postives = 94/196 (47.96%), Query Frame = 3 Query: 78 NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPS---XXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEG-TVRSNI------------DPIGQYSDEEIWKS---LERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIREGVCCLYN 608 N L+G++LS+ GE IG++G +G+GKSTLI+ RL+EPS R R G+I QE L E TV N+ ++++++I ++ LER L D + + D L S GQRQ + + R +++ LL +DE TAS+D +T + R++ E C+ N Sbjct: 13 NGEAALRGVSLSVGAGEIIGLIGPSGAGKSTLIRCVNRLIEPSSGRVQLGEVELTGLSSGALRRERRRIGMIFQEYALIERLTVMENVLAGRLGYTGFWNSWFRRFAEQDIQRAIALLERVGLIDHIDKRADAL-----------SGGQRQRVGIARALIQQPELLLVDEPTASLDPKTSRSVMRLLTE--LCIEN 195
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_BLOFL (Lipid A export ATP-binding/permease protein msbA OS=Blochmannia floridanus GN=msbA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.292e-12 Identity = 47/171 (27.49%), Postives = 85/171 (49.71%), Query Frame = 3 Query: 75 SNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 +NTP L I +I G+ I +VGR+GSGKST++ + R + R + ++ Q LF T+ +NI YS I ++ + ++ + D++V ++G S GQRQ + + R +L++ +L +DEAT+S+D++++ I + I Sbjct: 356 TNTPS-LCNINFNIESGKTIALVGRSGSGKSTIVNLLTRFYDVYQGRILLDGLNLNDYTLTSLREQVSVVTQNVYLFNDTIANNIAYARTRFYSRASIEEAAKMAYAMGFISKMKNGFDTIVGENGILLSNGQRQRIAIARALLRNCPILILDEATSSLDTESECIIYKSI 525
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: PHNC2_SYNJB (Phosphonates import ATP-binding protein phnC 2 OS=Synechococcus sp. GN=phnC2 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.688e-12 Identity = 59/186 (31.72%), Postives = 88/186 (47.31%), Query Frame = 3 Query: 87 LVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEP---SXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEG-TVRSNI---------------DPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 + LKG+TL + G+ + ++G +G+GKSTL++ RLVEP S R + G+I QE L E TV N+ Q + +E ++ L+R L D PDK D S GQRQ + + R +L++ LL +DE TAS+D +T +I R+I E Sbjct: 16 MALKGVTLEVPDGQVMALIGPSGAGKSTLLRCINRLVEPTSGSIWLNGIDLTRLNTRELRQARRKIGMIFQEYALVERLTVMENVLSGQLGYVNFWQSWFRKFPQATIDEAFRLLDRVGLSDF----PDK-------RADALSGGQRQRVGIARALLQNPELLLVDEPTASLDPKTSRQIMRLINE 190
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: NDVA_RHIME (Beta-(1-->2)glucan export ATP-binding/permease protein ndvA OS=Rhizobium meliloti GN=ndvA PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.688e-12 Identity = 46/184 (25.00%), Postives = 93/184 (50.54%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQY--SDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRII 581 G V+ D+ + +N+ ++ ++ G+ I +VG TG+GK+TL+ + R+ EP R + Q+ L ++ NI +G+ S +E+ + E D + + + D++V + G+ S G+RQ + + R +LK++ +L +DEAT+++D +T+A ++ I Sbjct: 333 GEVEFRDISFDF-ANSAQGVRNVSFKAKAGQTIAIVGPTGAGKTTLVNLLQRVHEPKHGQILIDGVDIATVTRKSLRRSIATVFQDAGLMNRSIGENIR-LGREDASLDEVMAAAEAAAASDFIEDRLNGYDTVVGERGNRLSGGERQRVAIARAILKNAPILVLDEATSALDVETEARVKDAI 514
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA_PSEU2 (Lipid A export ATP-binding/permease protein msbA OS=Pseudomonas syringae pv. syringae (strain B728a) GN=msbA PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.688e-12 Identity = 52/185 (28.11%), Postives = 85/185 (45.95%), Query Frame = 3 Query: 36 GNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSD------EEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 G++++ +L Y VL I+ S G+ I +VGR+GSGKSTL + R R + Q LF T+ +NI Y D +I + ++ + P D+ V ++G S GQRQ L + R +LK++ LL +DEAT+++D++++ IQ Sbjct: 351 GHLEVKNLSFFYPQTARQVLNDISFSAAPGQMIALVGRSGSGKSTLANLIPRFYGHDIGNILLDGVEINDYRLRNLRRHIAQVNQNVTLFNDTIANNI----AYGDLAGAPRADIEAAAADAYAREFIDQLPQGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQ 531
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: MSBA1_COLP3 (Lipid A export ATP-binding/permease protein msbA 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=msbA1 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.688e-12 Identity = 45/166 (27.11%), Postives = 83/166 (50.00%), Query Frame = 3 Query: 78 NTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNID-PIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 +T L L IT + GE + +VGR+GSGKST + R + + R +F + Q+ VLF T+ +NI + ++ EI ++ + + + L++ + ++G S GQRQ + + R +L + L +DEAT+++D++++ IQ Sbjct: 376 DTKLALNDITFDLAPGETLALVGRSGSGKSTASSLLLRFYDATRGEILIDDTNIEQFQLKDLRKQFSYVSQQVVLFNDTLANNIAYGKPEATEAEIIEAAKSAHVMEFAEHMEQGLETNIGENGALLSGGQRQRVAIARALLCDTPFLILDEATSALDTESERHIQ 541
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: ABCB8_XENTR (ATP-binding cassette sub-family B member 8, mitochondrial OS=Xenopus tropicalis GN=abcb8 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.688e-12 Identity = 45/164 (27.44%), Postives = 85/164 (51.83%), Query Frame = 3 Query: 90 VLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSR-FGIIPQEPVLFEGTVRSNIDPIGQ--YSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQ 572 VL+ L I G+ + +VG++G GKST+ + R +P+ R G I QEPVLF T+ NI G+ +D E+ ++ + + + P+ ++++ + G S GQ+Q + + R +LK ++L +DEAT+++D++++ +Q Sbjct: 459 VLRSFDLRIPHGKTVALVGQSGGGKSTVAALLERFYDPTEGAVQLDGVDIRILDPSWLRGEVIGFINQEPVLFGTTIIENIR-FGRPDATDAEVHEAAIQANADSFIRSFPEGYNTMLGERGVTLSGGQKQRVAIARALLKDPKILILDEATSALDTESERAVQ 621 The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 452
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bpback to top |