EY736163
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_PONAB (Cystic fibrosis transmembrane conductance regulator OS=Pongo abelii GN=CFTR PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.245e-34 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1204 WPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ 1390 HSP 2 Score: 33.113 bits (74), Expect = 1.245e-34 Identity = 16/59 (27.12%), Postives = 32/59 (54.24%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKL 771 A CT+I HRI +++C + +V++ ++ +LL + SL ++ P+ +KL Sbjct: 1393 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERSLFQQAIS--PSDRVKL 1449
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_HUMAN (Cystic fibrosis transmembrane conductance regulator OS=Homo sapiens GN=CFTR PE=1 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 1.245e-34 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1204 WPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ 1390 HSP 2 Score: 33.113 bits (74), Expect = 1.245e-34 Identity = 16/59 (27.12%), Postives = 32/59 (54.24%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKL 771 A CT+I HRI +++C + +V++ ++ +LL + SL ++ P+ +KL Sbjct: 1393 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERSLFRQAIS--PSDRVKL 1449
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_GORGO (Cystic fibrosis transmembrane conductance regulator OS=Gorilla gorilla gorilla GN=CFTR PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.245e-34 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1204 WPSGGQMTVKDLTAKYTEGGNAILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ 1390 HSP 2 Score: 33.113 bits (74), Expect = 1.245e-34 Identity = 16/59 (27.12%), Postives = 32/59 (54.24%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKL 771 A CT+I HRI +++C + +V++ ++ +LL + SL ++ P+ +KL Sbjct: 1393 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERSLFRQAIS--PSDRVKL 1449
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_COLGU (Cystic fibrosis transmembrane conductance regulator OS=Colobus guereza GN=CFTR PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 1.622e-34 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1205 WPSGGQMTIKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TKGEIQIDGVSWDSVTLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ 1391 HSP 2 Score: 33.113 bits (74), Expect = 1.622e-34 Identity = 16/59 (27.12%), Postives = 32/59 (54.24%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKL 771 A CT+I HRI +++C + +V++ ++ +LL + SL ++ P+ +KL Sbjct: 1394 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERSLFRQAIS--PSDRVKL 1450
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_OTOGA (Cystic fibrosis transmembrane conductance regulator OS=Otolemur garnettii GN=CFTR PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.622e-34 Identity = 69/188 (36.70%), Postives = 109/188 (57.98%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL RY + +L+ I+ SI G+++G++GRTG+GKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1206 WPSGGQMTVKDLTARYIDSGNAILENISFSISPGQRVGLLGRTGAGKSTLLSAFLRLLN-TEGDIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGYVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQ 1392 HSP 2 Score: 33.4982 bits (75), Expect = 1.622e-34 Identity = 17/62 (27.42%), Postives = 33/62 (53.23%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKLDER 780 A CT+I HRI +++C + +V++ ++ +LL + SL ++ P+ +KL R Sbjct: 1395 ADCTVILCEHRIEAMLECQRFLVIEENKVRQYDSIQKLLSEKSLFRQAIS--PSDRMKLFPR 1454
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_MACNE (Cystic fibrosis transmembrane conductance regulator OS=Macaca nemestrina GN=CFTR PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.622e-34 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1205 WPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ 1391 HSP 2 Score: 33.4982 bits (75), Expect = 1.622e-34 Identity = 17/72 (23.61%), Postives = 37/72 (51.39%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKLDERIPWTRSRVEP 810 A CT+I HRI +++C + +V++ ++ +LL + SL ++ P+ +KL ++ + +P Sbjct: 1394 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERSLFQQAIS--PSDRVKLFPHRNSSKCKTQP 1463
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_MACMU (Cystic fibrosis transmembrane conductance regulator OS=Macaca mulatta GN=CFTR PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 1.622e-34 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1205 WPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ 1391 HSP 2 Score: 33.4982 bits (75), Expect = 1.622e-34 Identity = 17/72 (23.61%), Postives = 37/72 (51.39%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKLDERIPWTRSRVEP 810 A CT+I HRI +++C + +V++ ++ +LL + SL ++ P+ +KL ++ + +P Sbjct: 1394 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERSLFRQAIS--PSDRVKLFPHRNSSKCKTQP 1463
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_MACFU (Cystic fibrosis transmembrane conductance regulator OS=Macaca fuscata fuscata GN=CFTR PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.622e-34 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1205 WPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ 1391 HSP 2 Score: 33.4982 bits (75), Expect = 1.622e-34 Identity = 17/72 (23.61%), Postives = 37/72 (51.39%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKLDERIPWTRSRVEP 810 A CT+I HRI +++C + +V++ ++ +LL + SL ++ P+ +KL ++ + +P Sbjct: 1394 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERSLFRQAIS--PSDRVKLFPHRNSSKCKTQP 1463
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_MACFA (Cystic fibrosis transmembrane conductance regulator OS=Macaca fascicularis GN=CFTR PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 1.622e-34 Identity = 69/188 (36.70%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP Q+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1205 WPSGGQMTVKDLTAKYTEGGNPILENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQ 1391 HSP 2 Score: 33.4982 bits (75), Expect = 1.622e-34 Identity = 17/72 (23.61%), Postives = 37/72 (51.39%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKLDERIPWTRSRVEP 810 A CT+I HRI +++C + +V++ ++ +LL + SL ++ P+ +KL ++ + +P Sbjct: 1394 ADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLNERSLFRQAIS--PSDRVKLFPHRNSSKCKTQP 1463
BLAST of EY736163 vs. ExPASy Swiss-Prot
Match: CFTR_MUNRE (Cystic fibrosis transmembrane conductance regulator OS=Muntiacus reevesi GN=CFTR PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 2.112e-34 Identity = 70/188 (37.23%), Postives = 109/188 (57.98%), Query Frame = 3 Query: 24 WPAHGNVDLIDLQVRYRSNTPLVLKGITLSIHGGEKIGVVGRTGSGKSTLIQVFFRLVEPSXXXXXXXXXXXXXXXXXXXRSRFGIIPQEPVLFEGTVRSNIDPIGQYSDEEIWKSLERCQLKDVVAAKPDKLDSLVADSGDNWSVGQRQLLCLGRVMLKHSRLLFMDEATASVDSQTDAEIQRIIRE 587 WP+ G + + DL +Y +L+ I+ SI G+++G++GRTGSGKSTL+ F RL+ + R FG+IPQ+ +F GT R N+DP GQ+SD+EIWK + L+ V+ P KLD ++ D G S G +QL+CL R +L +++L +DE +A +D T I+R +++ Sbjct: 1205 WPSGGQMTVKDLTAKYIDGGNAILENISFSISPGQRVGLLGRTGSGKSTLLLAFLRLLN-TKGEIQIDGVSWDSITLQQWRKAFGVIPQKVFIFSGTFRKNLDPYGQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPITYQIIRRTLKQ 1391 HSP 2 Score: 31.187 bits (69), Expect = 2.112e-34 Identity = 15/59 (25.42%), Postives = 31/59 (52.54%), Query Frame = 1 Query: 595 AACTIISIAHRIPTVMDCDKAIVVDARWAKESGEPSQLLEKPSLSAASVEELPNHTIKL 771 A CT+I HRI +++C + +V++ ++ ++L + SL ++ P +KL Sbjct: 1394 ADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQRMLSEKSLFRQAIS--PADRLKL 1450 The following BLAST results are available for this feature:
BLAST of EY736163 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 452
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736163 ID=EY736163; Name=EY736163; organism=Citrus sinensis; type=EST; length=874bpback to top |