EY736136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_BACFN (Serine hydroxymethyltransferase OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=glyA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 1.908e-43 Identity = 80/166 (48.19%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 201 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 D I DIIE E RQ KG+ELI SENF S VM+A+GS +TNKY+EGYPG RYYGG E +D +E + R E F + W NVQ SG+ +N V+ A+L P D+ M L+L HGGHLSHG +T I + Y L + TG +DYDQ+E+ A P Sbjct: 4 DDLIFDIIEKEHQRQLKGIELIASENFVSDQVMEAMGSCLTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRLKEIFGAE---W-ANVQPHSGAQANAAVFLAVLNPGDKFMGLNLAHGGHLSHGSLVNTS-----GIIYTPCEYNLKQETGRVDYDQMEEVALREKP 160 HSP 2 Score: 49.6766 bits (117), Expect = 1.908e-43 Identity = 21/57 (36.84%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 +PK+I+ G SAY+R +DY+R+R++ +K + GL+AAG++ +P++YA + Sbjct: 159 KPKMIIGGGSAYSREWDYKRMREIADKVGAILMIDMAHPAGLIAAGLLDNPVKYAHI 215
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_THESQ (Serine hydroxymethyltransferase OS=Thermotoga sp. (strain RQ2) GN=glyA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.908e-43 Identity = 76/167 (45.51%), Postives = 103/167 (61.68%), Query Frame = 3 Query: 198 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 VDPEI +++ +E RQ GLELI SENF S++V++ +GS++TNKY+EGYP RYYGG E++D AE L +RA F NVQ SGS +N VY AL +P D IM + L HGGHL+HG ++ F+ +PY +N T IDYD++ + A P Sbjct: 8 VDPEIYEVLVNELKRQEYGLELIASENFASLAVIETMGSMLTNKYAEGYPQKRYYGGCEWVDRAEELAIERAKRLFGAK----FANVQPHSGSQANMAVYLALAQPGDTIMGMSLSHGGHLTHG-----APVNFSGKIFKVVPYGVNLETETIDYDEVRRLALEHKP 165 HSP 2 Score: 55.8398 bits (133), Expect = 1.908e-43 Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 +PK+IVAG SAYAR+ D++R R++ ++ GLVAAG+ P+PLEYA V Sbjct: 164 KPKIIVAGGSAYARIIDFKRFREIADEVGAYLMVDMAHFAGLVAAGIHPNPLEYAHV 220
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_THEP1 (Serine hydroxymethyltransferase OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=glyA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.908e-43 Identity = 76/167 (45.51%), Postives = 103/167 (61.68%), Query Frame = 3 Query: 198 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 VDPEI +++ +E RQ GLELI SENF S++V++ +GS++TNKY+EGYP RYYGG E++D AE L +RA F NVQ SGS +N VY AL +P D IM + L HGGHL+HG ++ F+ +PY +N T IDYD++ + A P Sbjct: 8 VDPEIYEVLVNELKRQEYGLELIASENFASLAVIETMGSMLTNKYAEGYPQKRYYGGCEWVDRAEELAIERAKRLFGAK----FANVQPHSGSQANMAVYLALAQPGDTIMGMSLSHGGHLTHG-----APVNFSGKIFKVVPYGVNLETETIDYDEVRRLALEHKP 165 HSP 2 Score: 55.8398 bits (133), Expect = 1.908e-43 Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 +PK+IVAG SAYAR+ D++R R++ ++ GLVAAG+ P+PLEYA V Sbjct: 164 KPKIIVAGGSAYARIIDFKRFREIADEVGAYLMVDMAHFAGLVAAGIHPNPLEYAHV 220
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_PETMO (Serine hydroxymethyltransferase OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=glyA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.908e-43 Identity = 77/170 (45.29%), Postives = 104/170 (61.18%), Query Frame = 3 Query: 189 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 L+ D E+ +I++ E RQ GLELI SEN+ S SVM+A GS+ TNKY+EGYP RYYGG EYID E+L + RA E F NVQ SGS +N Y AL+KP D +M + L HGGHL+HG ++ + F + Y ++E T I+YD++E+ A + P Sbjct: 5 LKSSDNEVYEILQKELKRQEYGLELIASENYASKSVMEAAGSIFTNKYAEGYPKRRYYGGCEYIDEVETLARDRAKELFNAK----FANVQPHSGSQANMGAYLALMKPGDTLMGMSLSHGGHLTHG-----APVNFSGMLFNVVSYGVDEETETINYDEVERIAKDAKP 165 HSP 2 Score: 53.1434 bits (126), Expect = 1.908e-43 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 +PK+IVAG SAY+R+ D++R R++ ++ GLVAAG+ P+P+EYA V Sbjct: 164 KPKVIVAGGSAYSRIIDFKRFREIADEVGAYLMVDMAHFAGLVAAGIHPNPVEYAHV 220
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_BAUCH (Serine hydroxymethyltransferase OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=glyA PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.487e-43 Identity = 79/166 (47.59%), Postives = 101/166 (60.84%), Query Frame = 3 Query: 201 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 D + IE E RQ + +ELI SEN+TS VMQA GS++TNKY+EGY G RYYGG Y+D E+L RA F D NVQ SGS +NF VYTALLKP D I+ ++L HGGHL+HG ++ + + Y +N++ GYIDY+QL K A P Sbjct: 12 DTALWKAIELEAKRQEEHIELIASENYTSPRVMQAQGSILTNKYAEGYSGKRYYGGCVYVDQVETLAIDRAKALFECD----YANVQPHSGSQANFAVYTALLKPGDTILGMNLAHGGHLTHG-----ASVNFSGKMYNVISYGVNKN-GYIDYEQLNKLATMHKP 167 HSP 2 Score: 55.8398 bits (133), Expect = 2.487e-43 Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 2 Query: 683 TLFRPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 T+ +PK+I+ G SAY+R+ D++ +R+V + K + + GLVAAGV P+P+ YADV Sbjct: 163 TMHKPKMIIGGFSAYSRVVDWDIMRQVADSIKAFLFVDMAHIAGLVAAGVYPNPVPYADV 222
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_CLOPH (Serine hydroxymethyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=glyA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 3.241e-43 Identity = 78/170 (45.88%), Postives = 112/170 (65.88%), Query Frame = 3 Query: 189 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 ++V DPE+AD I E ARQ +ELI SENF S +VM A+GS +TNKY+EGYPG RYYGG E++D+AE+L +RA + F NVQ SG+ +N V+ ALL+P D +M ++L HGGHL+HG ++ +F +PY ++++ G+IDY+++EK A P Sbjct: 7 IKVFDPELADSITMEIARQNDHIELIASENFVSKAVMAAMGSPLTNKYAEGYPGKRYYGGCEFVDIAENLAIERAKKLFGCT----YANVQPHSGAQANMAVFFALLQPGDTVMGMNLAHGGHLTHG-----SPVNFSGSYFNIVPYGVDDN-GFIDYEEVEKIAKECKP 166 HSP 2 Score: 49.6766 bits (117), Expect = 3.241e-43 Identity = 27/57 (47.37%), Postives = 35/57 (61.40%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 +PKLIVAGASAYAR D++R R++ + + GLVAAG SP+ YA V Sbjct: 165 KPKLIVAGASAYARKIDFKRFREIADLVGAYLMVDMAHIAGLVAAGYHQSPIPYAHV 221
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_CLOBH (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.241e-43 Identity = 72/170 (42.35%), Postives = 109/170 (64.12%), Query Frame = 3 Query: 189 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+++GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T IDY++L+K A + P Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMESMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEKLKKIALENRP 166 HSP 2 Score: 56.9954 bits (136), Expect = 3.241e-43 Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYAD 859 RPK+IV+GASAY R+ D+++IR++C++ + GLVA G+ PSP+ YAD Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYAD 220
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_CLOB1 (Serine hydroxymethyltransferase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=glyA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.241e-43 Identity = 72/170 (42.35%), Postives = 109/170 (64.12%), Query Frame = 3 Query: 189 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 L+ DPE+ D+I+ E+ RQ +ELI SENFTS+SVM+++GS++TNKY+EGYP RYYGG E++D E L ++R + F + NVQ SGS +N VY ++L+ D I+ +DL HGGHL+HG ++ + + Y +++ T IDY++L+K A + P Sbjct: 6 LKNTDPELLDMIKKEEERQEYNIELIASENFTSLSVMESMGSLLTNKYAEGYPHKRYYGGCEFVDEVEDLARERLKKLFAAE----HANVQPHSGSQANMAVYMSVLQTGDTILGMDLSHGGHLTHG-----SPVNFSGKLYNFISYGVDKETETIDYEKLKKIALENRP 166 HSP 2 Score: 56.9954 bits (136), Expect = 3.241e-43 Identity = 26/56 (46.43%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYAD 859 RPK+IV+GASAY R+ D+++IR++C++ + GLVA G+ PSP+ YAD Sbjct: 165 RPKMIVSGASAYPRIIDFQKIREICDEIDAYMMVDMAHIAGLVATGLHPSPVPYAD 220
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_CHLP8 (Serine hydroxymethyltransferase OS=Chlorobaculum parvum (strain NCIB 8327) GN=glyA PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 4.221e-43 Identity = 83/165 (50.30%), Postives = 111/165 (67.27%), Query Frame = 3 Query: 189 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 683 L+ +DPE+ + I +E RQ + LELI SENFTS +VM+A GSVMTNKY+EGYPG RYYGG E++D+AE+L + RA + F + VNVQ SGS +N V A+LKP D IM LDL HGGHL+HG K++ FF+ Y +++ TG ID + +E+ A Sbjct: 6 LKRLDPEVFEAIANETRRQTETLELIASENFTSTAVMEACGSVMTNKYAEGYPGKRYYGGCEFVDVAENLARDRAKKLFGCE----YVNVQPHSGSSANMAVLFAVLKPGDSIMGLDLSHGGHLTHG-----SKVNFSGQFFDAHSYGVDKETGIIDMNAVEEMA 161 HSP 2 Score: 40.817 bits (94), Expect = 4.221e-43 Identity = 24/63 (38.10%), Postives = 38/63 (60.32%), Query Frame = 2 Query: 668 VGEKCTLFRPKLIVAGASAYARLYDYERIRKVCNK-QKLLCWQIWHTLVGLVAAGVIPSPLEY 853 V E +PKLI+ GASAY++ +D++ R++ +K L I H GLVAAG+ +P+ + Sbjct: 157 VEEMALKVKPKLIITGASAYSQGFDFKAFREIADKVGAFLMADIAHP-AGLVAAGLSANPVPH 218
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_DEHSC (Serine hydroxymethyltransferase OS=Dehalococcoides sp. (strain CBDB1) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.223e-43 Identity = 75/170 (44.12%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 189 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 L+ DP + + I E R + ++LI SEN+TS +V++A GSV TNKY+EGYPG RYY G EY D E L RA F + NVQ SG+ +N Y A++KP D IM L L HGGHL+HG K++ + + Y LN T IDYD LEK A P Sbjct: 4 LKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAGCEYADAVEELAIDRAKTLFHAE----HANVQPHSGAQANMAAYFAMVKPGDTIMGLTLSHGGHLTHG-----SKVNFTGKLYHVIEYGLNAETERIDYDNLEKLAMEHRP 164 HSP 2 Score: 60.077 bits (144), Expect = 4.223e-43 Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNK-QKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 RP++IV GASAY R+ D+ER R +C+K L I H + GLVAAG+ PSP+ YADV Sbjct: 163 RPRMIVTGASAYPRILDFERFRAICDKVDAKLMVDIAH-IAGLVAAGLHPSPVPYADV 219 The following BLAST results are available for this feature:
BLAST of EY736136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY736136 ID=EY736136; Name=EY736136; organism=Citrus sinensis; type=EST; length=863bpback to top |