EY736136
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_DEHSB (Serine hydroxymethyltransferase OS=Dehalococcoides sp. (strain BAV1) GN=glyA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.223e-43 Identity = 75/170 (44.12%), Postives = 96/170 (56.47%), Query Frame = 3 Query: 189 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 L+ DP + + I E R + ++LI SEN+TS +V++A GSV TNKY+EGYPG RYY G EY D E L RA F + NVQ SG+ +N Y A++KP D IM L L HGGHL+HG K++ + + Y LN T IDYD LEK A P Sbjct: 4 LKTSDPAVYNAIMQETTRLKETIDLIASENYTSKAVLEAQGSVFTNKYAEGYPGKRYYAGCEYADAVEELAIDRAKTLFHAE----HANVQPHSGAQANMAAYFAMVKPGDTIMGLTLSHGGHLTHG-----SKVNFTGKLYHVIEYGLNAETERIDYDNLEKLAMEHRP 164 HSP 2 Score: 60.077 bits (144), Expect = 4.223e-43 Identity = 32/58 (55.17%), Postives = 41/58 (70.69%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNK-QKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 RP++IV GASAY R+ D+ER R +C+K L I H + GLVAAG+ PSP+ YADV Sbjct: 163 RPRMIVTGASAYPRILDFERFRAICDKVDAKLMVDIAH-IAGLVAAGLHPSPVPYADV 219
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_GEOTN (Serine hydroxymethyltransferase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=glyA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 4.224e-43 Identity = 71/161 (44.10%), Postives = 101/161 (62.73%), Query Frame = 3 Query: 201 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSA 683 DP++ IE E+ RQ +ELI SENF S +VM+A GSVMTNKY+EGYPG RYYGG EY+D+ E L ++RA + F + NVQ SG+ +N VY +LKP D ++ ++L HGGHL+HG ++ + + + Y ++ T IDYD + + A Sbjct: 8 DPQVFATIEQERKRQHAKIELIASENFVSRAVMEAQGSVMTNKYAEGYPGRRYYGGCEYVDVVEDLARERAKQLFGAE----HANVQPHSGAQANMAVYFTVLKPGDTVLGMNLSHGGHLTHG-----SPVNFSGVQYNFVEYGVDPETHVIDYDDVREKA 159 HSP 2 Score: 55.8398 bits (133), Expect = 4.224e-43 Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 2 Query: 668 VGEKCTLFRPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYA 856 V EK L RPKLIVAGASAY R+ D+ + R++ ++ + GLVAAG+ P+P+ YA Sbjct: 155 VREKARLHRPKLIVAGASAYPRVIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYA 217
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_PORGI (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis GN=glyA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.502e-43 Identity = 78/166 (46.99%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 201 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 D I D+IE E RQ KG+ELI SENF S VMQA+GS MTNKY+EGYPG RYYGG E +D +E + R + + + W NVQ SG+ +N V A L+ D M L+L HGGHLSHG +++ I + + Y L+E TG +DYD +EK A P Sbjct: 4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRIKQLYGAE---W-ANVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHLSHG-----SLVNSSGILYRPIGYNLSEETGMVDYDHMEKMAIEHKP 160 HSP 2 Score: 51.2174 bits (121), Expect = 5.502e-43 Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 +PKLI+ G SAY+R +DY+R+R++ +K L GL+AAG++ +P++YA + Sbjct: 159 KPKLIIGGGSAYSREWDYKRMREIADKVGALLMIDMAHPAGLIAAGLLENPVKYAHI 215
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_PORG3 (Serine hydroxymethyltransferase OS=Porphyromonas gingivalis (strain ATCC 33277 / DSM 20709 / JCM 12257) GN=glyA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 5.502e-43 Identity = 78/166 (46.99%), Postives = 100/166 (60.24%), Query Frame = 3 Query: 201 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 D I D+IE E RQ KG+ELI SENF S VMQA+GS MTNKY+EGYPG RYYGG E +D +E + R + + + W NVQ SG+ +N V A L+ D M L+L HGGHLSHG +++ I + + Y L+E TG +DYD +EK A P Sbjct: 4 DSVIFDLIEKEHQRQLKGIELIASENFVSEQVMQAMGSCMTNKYAEGYPGKRYYGGCEVVDQSEQIAIDRIKQLYGAE---W-ANVQPHSGAQANMAVLLACLEAGDTFMGLNLEHGGHLSHG-----SLVNSSGILYRPIGYNLSEETGMVDYDHMEKMAIEHKP 160 HSP 2 Score: 51.2174 bits (121), Expect = 5.502e-43 Identity = 23/57 (40.35%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 +PKLI+ G SAY+R +DY+R+R++ +K L GL+AAG++ +P++YA + Sbjct: 159 KPKLIIGGGSAYSREWDYKRMREIADKVGALLMIDMAHPAGLIAAGLLENPVKYAHI 215
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_THEMA (Serine hydroxymethyltransferase OS=Thermotoga maritima GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.502e-43 Identity = 79/168 (47.02%), Postives = 108/168 (64.29%), Query Frame = 3 Query: 198 VDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALE-AFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 VDPEI +++ +E RQ GLELI SENF S++V++ +GS++TNKY+EGYP RYYGG E++D AE +RA+E A RL K+ NVQ SGS +N VY AL +P D IM + L HGGHL+HG ++ F+ +PY +N T IDYD++ + A P Sbjct: 8 VDPEIYEVLVNELKRQEYGLELIASENFASLAVIETMGSMLTNKYAEGYPKKRYYGGCEWVDRAE----ERAIERAKRLFGAKF-ANVQPHSGSQANMAVYLALAQPGDTIMGMSLSHGGHLTHG-----APVNFSGKIFKVVPYGVNLETETIDYDEVRRLALEHKP 165 HSP 2 Score: 55.8398 bits (133), Expect = 5.502e-43 Identity = 27/57 (47.37%), Postives = 38/57 (66.67%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 +PK+IVAG SAYAR+ D++R R++ ++ GLVAAG+ P+PLEYA V Sbjct: 164 KPKIIVAGGSAYARIIDFKRFREIADEVGAYLMVDMAHFAGLVAAGIHPNPLEYAHV 220
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_CHLAD (Serine hydroxymethyltransferase OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=glyA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 5.503e-43 Identity = 79/170 (46.47%), Postives = 104/170 (61.18%), Query Frame = 3 Query: 189 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 L DP IAD+IE E RQ +GLELI SEN+TS++VM+A GSV+TNKY+EG PG RYYGG E++D E L RA + F NVQ SG+ +N V+TALL+P D I+ + L HGGHL+HG ++ ++ Y ++ TG IDYD L A + P Sbjct: 5 LRATDPIIADLIEREAQRQRQGLELIASENYTSLAVMEAQGSVLTNKYAEGLPGRRYYGGCEFVDAIEQLAIDRACQLFGTS----HANVQPHSGAQANIAVFTALLQPGDTILGMRLDHGGHLTHG-----SPVNFSGKWYNVHFYGVDPQTGQIDYDDLAAKARAIRP 165 HSP 2 Score: 50.0618 bits (118), Expect = 5.503e-43 Identity = 26/62 (41.94%), Postives = 37/62 (59.68%), Query Frame = 2 Query: 677 KCTLFRPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 K RPKLI +GASAY RL D+ R+R++ ++ L + GLVA G PSP+ +A + Sbjct: 159 KARAIRPKLITSGASAYPRLIDFARMRQIADEVGALLMADIAHIAGLVATGEHPSPVGHAHI 220
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_ANATD (Serine hydroxymethyltransferase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=glyA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 5.503e-43 Identity = 75/170 (44.12%), Postives = 105/170 (61.76%), Query Frame = 3 Query: 201 DPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGPN*LL 710 DPEIA+ I+ E RQ +ELI SENF S++VM A+GS +TNKY+EGYPG RYYGG EYID+ ES+ +RA + F + NVQ SG+ +N VY A+L P D I+ ++L HGGHL+HG ++ + + Y ++ T I+YD++ K A P +L Sbjct: 11 DPEIAEAIKSELKRQQNKIELIASENFVSIAVMAAMGSPLTNKYAEGYPGKRYYGGCEYIDVVESIAIERAKKLFGAE----HANVQPHSGAQANMAVYFAVLNPGDTILGMNLSHGGHLTHG-----SPVNFSGKLYNIISYGVDPETETINYDEVLKLAKEHRPKLIL 171 HSP 2 Score: 55.8398 bits (133), Expect = 5.503e-43 Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYAD 859 RPKLI+AGASAY R+ D+++ R++ ++ + GLVAAG+ PSP+EYAD Sbjct: 166 RPKLILAGASAYPRVIDFKKFREIADEVGAYLMVDMAHIAGLVAAGLHPSPVEYAD 221
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA1_PSEPF (Serine hydroxymethyltransferase 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=glyA1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.504e-43 Identity = 76/170 (44.71%), Postives = 105/170 (61.76%), Query Frame = 3 Query: 189 LEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 L+ DP IA +I+ E+ RQ LELI SEN+ S V+QA GS++TNKY+EGYPG RYYGG + +D E+L +RA + F + VNVQ SGS +N V+ A+L+P DRI+ + L HGGHL+HG ++ FF+ Y L + + +DYDQ+E A P Sbjct: 3 LQNFDPAIARLIDRERNRQETHLELIASENYVSEEVLQAQGSLLTNKYAEGYPGRRYYGGCKVVDEIENLAIERARKLFGCE----YVNVQPHSGSQANQAVFLAVLEPGDRILGMSLAHGGHLTHG-----ASVNFSGKFFQAFTYGLEKDSETLDYDQMEDLAREHRP 163 HSP 2 Score: 56.225 bits (134), Expect = 5.504e-43 Identity = 27/56 (48.21%), Postives = 37/56 (66.07%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYAD 859 RPK+I+AGASAY+R+ D+ R RK+C++ GL+AAGV PSP+ AD Sbjct: 162 RPKMIIAGASAYSRVIDFPRFRKICDEIGAYLMVDMAHYAGLIAAGVYPSPVGIAD 217
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBY (Serine hydroxymethyltransferase OS=Acinetobacter baumannii (strain AYE) GN=glyA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.171e-43 Identity = 77/173 (44.51%), Postives = 102/173 (58.96%), Query Frame = 3 Query: 180 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 N + DPE+A I E RQ +ELI SEN+ S +VM+A GS +TNKY+EGYPG RYYGG E++D+ E + RA E F D NVQ +GS +N VY ALL P D ++ + L HGGHL+HG K+S + + Y LN TG IDY+++E+ A P Sbjct: 4 NISISEFDPELAQAIASEDERQEAHIELIASENYCSPAVMEAQGSKLTNKYAEGYPGKRYYGGCEFVDVIEQMAIDRAKELFGAD----YANVQPHAGSQANSAVYLALLNPGDTVLGMSLAHGGHLTHG-----AKVSFSGKTYNAVQYGLNAETGEIDYEEVERLALEHKP 167 HSP 2 Score: 52.7582 bits (125), Expect = 7.171e-43 Identity = 25/57 (43.86%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 +P++IVAG SAY+R+ D++R R + +K + + GLVAAGV P+P++ ADV Sbjct: 166 KPRMIVAGFSAYSRVVDWQRFRDIADKVGAYLFVDMAHVAGLVAAGVYPNPVQIADV 222
BLAST of EY736136 vs. ExPASy Swiss-Prot
Match: GLYA_ACIBT (Serine hydroxymethyltransferase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=glyA PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 7.171e-43 Identity = 77/173 (44.51%), Postives = 102/173 (58.96%), Query Frame = 3 Query: 180 NAPLEVVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPEKWGVNVQSLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSAPSSGP 698 N + DPE+A I E RQ +ELI SEN+ S +VM+A GS +TNKY+EGYPG RYYGG E++D+ E + RA E F D NVQ +GS +N VY ALL P D ++ + L HGGHL+HG K+S + + Y LN TG IDY+++E+ A P Sbjct: 4 NISISEFDPELAQAIASEDERQEAHIELIASENYCSPAVMEAQGSKLTNKYAEGYPGKRYYGGCEFVDVIEQMAIDRAKELFGAD----YANVQPHAGSQANSAVYLALLNPGDTVLGMSLAHGGHLTHG-----AKVSFSGKTYNAVQYGLNAETGEIDYEEVERLALEHKP 167 HSP 2 Score: 52.7582 bits (125), Expect = 7.171e-43 Identity = 25/57 (43.86%), Postives = 39/57 (68.42%), Query Frame = 2 Query: 692 RPKLIVAGASAYARLYDYERIRKVCNKQKLLCWQIWHTLVGLVAAGVIPSPLEYADV 862 +P++IVAG SAY+R+ D++R R + +K + + GLVAAGV P+P++ ADV Sbjct: 166 KPRMIVAGFSAYSRVVDWQRFRDIADKVGAYLFVDMAHVAGLVAAGVYPNPVQIADV 222 The following BLAST results are available for this feature:
BLAST of EY736136 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736136 ID=EY736136; Name=EY736136; organism=Citrus sinensis; type=EST; length=863bpback to top |