EY736121

Overview
NameEY736121
Unique NameEY736121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_CLOD6 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Clostridium difficile (strain 630) GN=gpmI PE=3 SV=1)

HSP 1 Score: 53.1434 bits (126), Expect = 9.973e-13
Identity = 32/80 (40.00%), Postives = 46/80 (57.50%), Query Frame = 3 
Query:   66 GPESRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNL-EEYVEIPSDSGITFNVQPTMKALEIADRA 302
            GP+S  +T   GEY+  NG      +ET K+ HVT F+NG   G  + N  EE + IPS    T++++P M A E+ D+A
Sbjct:  304 GPQSLANTL--GEYLAKNGKTQLRAAETEKYAHVTFFFNG---GVEEPNKGEERLLIPSPKVATYDLKPEMSAYELTDKA 378

HSP 2 Score: 39.2762 bits (90), Expect = 9.973e-13
Identity = 21/52 (40.38%), Postives = 28/52 (53.85%), Query Frame = 1 
Query:  328 FHQVRVNLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            F  + +N  N DMV HTG IEA + A    D  V  +ID I + GG  ++ A
Sbjct:  387 FDFIVLNFANPDMVGHTGSIEAAIKAVETVDTCVGKLIDKIVELGGSAIITA 438
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHELP (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 1.295e-12
Identity = 26/72 (36.11%), Postives = 41/72 (56.94%), Query Frame = 3 
Query:   99 GEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            GE + +NG      SET K+ HVT F+NG +   F+   E+ + I S    T+++QP M + E+ D+  +AI
Sbjct:  318 GEVLQNNGKTQLRISETEKYAHVTFFFNGGKEEPFEG--EDRILIQSPKVATYDLQPEMSSTELTDKLVEAI 387

HSP 2 Score: 42.743 bits (99), Expect = 1.295e-12
Identity = 24/65 (36.92%), Postives = 37/65 (56.92%), Query Frame = 1 
Query:  292 LTGQRRPSVNPTFHQVRV-NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            LT +   ++  T + V + N PN DMV HTG+ +A V AC A D  +  +++A+ K  G  L+ A
Sbjct:  379 LTDKLVEAIESTQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVEALAKVDGECLITA 443
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHEHH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella halifaxensis (strain HAW-EB4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 47.7506 bits (112), Expect = 1.295e-12
Identity = 26/65 (40.00%), Postives = 39/65 (60.00%), Query Frame = 1 
Query:  292 LTGQRRPSVNPTFHQVRV-NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            LT +   ++  T + V + N PN DMV HTG+ +A V AC A D+ +  I++A+ K GG  L+ A
Sbjct:  379 LTDKLVEAIESTQYDVIICNYPNGDMVGHTGNFDAAVKACEAVDSCIGRIVEALEKVGGECLITA 443

HSP 2 Score: 44.2838 bits (103), Expect = 1.295e-12
Identity = 23/72 (31.94%), Postives = 40/72 (55.56%), Query Frame = 3 
Query:   99 GEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            GE + +  +     SET K+ HVT F+NG +   F    E+ + + S    T+++QP M ++E+ D+  +AI
Sbjct:  318 GETLQNRDLTQLRISETEKYAHVTFFFNGGKEEPFKG--EDRILVQSPKVATYDLQPEMSSVELTDKLVEAI 387
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB9 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS195) GN=gpmI PE=3 SV=1)

HSP 1 Score: 46.9802 bits (110), Expect = 1.295e-12
Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 1 
Query:  292 LTGQRRPSVNPTFHQVRV-NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            LT +   ++  T + V + N PN DMV HTG+ +A V AC A D  +  ++DA+ K GG  ++ A
Sbjct:  379 LTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGCVVDALAKVGGECIITA 443

HSP 2 Score: 45.0542 bits (105), Expect = 1.295e-12
Identity = 26/80 (32.50%), Postives = 40/80 (50.00%), Query Frame = 3 
Query:   75 SRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            S     + GE +   G      SET K+ HVT F+NG +   F+   E+ + I S    T+++QP M + E+ D+   AI
Sbjct:  310 SENLVNTLGEVLQKQGRTQLRISETEKYAHVTFFFNGGKEEPFEG--EDRILINSPKVATYDLQPEMSSAELTDKLVAAI 387
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_PHOPR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Photobacterium profundum GN=gpmI PE=3 SV=2)

HSP 1 Score: 48.1358 bits (113), Expect = 1.295e-12
Identity = 30/101 (29.70%), Postives = 49/101 (48.51%), Query Frame = 3 
Query:   15 FFFIYKKXNNVRXLAGTGPESRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAIR 317
            F  + +   N++  A   P +  +T   GE++   G +    SET K+ HVT F+NG     FD      V  P  +  T+++QP M A E+ ++   AI+
Sbjct:  291 FVMLTRYAANIKLPAAFPPATLKNTL--GEWLSKKGKKQLRISETEKYAHVTFFFNGGVEDEFDGETRSLVASPKVA--TYDLQPEMSAPELTEKLVAAIK 387

HSP 2 Score: 43.8986 bits (102), Expect = 1.295e-12
Identity = 22/52 (42.31%), Postives = 29/52 (55.77%), Query Frame = 1 
Query:  328 FHQVRVNLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            F  +  N PN DMV HTG  +A V AC A D  +  +++AI   GG  L+ A
Sbjct:  391 FDTIICNYPNGDMVGHTGVYDAAVKACEALDGCIGQVVEAIKSVGGQLLITA 442
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_PSEAE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas aeruginosa GN=gpmI PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 1.681e-12
Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 3 
Query:   87 TTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            T   GEY+  +G      +ET K+ HVT F++G R   ++   EE + IPS    T+++QP M A E+ DR  +AI
Sbjct:  315 TNVLGEYLAKHGKTQLRIAETEKYAHVTFFFSGGREEPYEG--EERILIPSPKVATYDLQPEMSAPEVTDRIVEAI 388

HSP 2 Score: 37.7354 bits (86), Expect = 1.681e-12
Identity = 21/47 (44.68%), Postives = 26/47 (55.32%), Query Frame = 1 
Query:  343 VNLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            VN  N DMV HTG  EA V A    D  +  I++A+ K GG  L+ A
Sbjct:  398 VNYANGDMVGHTGVFEAAVKAVECLDTCMGRIVEALDKVGGEALITA 444
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_PSEAB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=gpmI PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 1.681e-12
Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 3 
Query:   87 TTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            T   GEY+  +G      +ET K+ HVT F++G R   ++   EE + IPS    T+++QP M A E+ DR  +AI
Sbjct:  315 TNVLGEYLAKHGKTQLRIAETEKYAHVTFFFSGGREEPYEG--EERILIPSPKVATYDLQPEMSAPEVTDRIVEAI 388

HSP 2 Score: 37.7354 bits (86), Expect = 1.681e-12
Identity = 21/47 (44.68%), Postives = 26/47 (55.32%), Query Frame = 1 
Query:  343 VNLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            VN  N DMV HTG  EA V A    D  +  I++A+ K GG  L+ A
Sbjct:  398 VNYANGDMVGHTGVFEAAVKAVECLDTCMGRIVEALDKVGGEALITA 444
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_PSEA7 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas aeruginosa (strain PA7) GN=gpmI PE=3 SV=1)

HSP 1 Score: 53.9138 bits (128), Expect = 1.681e-12
Identity = 29/76 (38.16%), Postives = 43/76 (56.58%), Query Frame = 3 
Query:   87 TTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            T   GEY+  +G      +ET K+ HVT F++G R   ++   EE + IPS    T+++QP M A E+ DR  +AI
Sbjct:  315 TNVLGEYLAKHGKTQLRIAETEKYAHVTFFFSGGREEPYEG--EERILIPSPKVATYDLQPEMSAPEVTDRIVEAI 388

HSP 2 Score: 37.7354 bits (86), Expect = 1.681e-12
Identity = 21/47 (44.68%), Postives = 26/47 (55.32%), Query Frame = 1 
Query:  343 VNLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            VN  N DMV HTG  EA V A    D  +  I++A+ K GG  L+ A
Sbjct:  398 VNYANGDMVGHTGVFEAAVKAVECLDTCMGRIVEALDKVGGEALITA 444
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB8 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS185) GN=gpmI PE=3 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 2.183e-12
Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 1 
Query:  292 LTGQRRPSVNPTFHQVRV-NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            LT +   ++  T + V + N PN DMV HTG+ +A V AC A D  +  ++DA+ K GG  ++ A
Sbjct:  379 LTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITA 443

HSP 2 Score: 45.0542 bits (105), Expect = 2.183e-12
Identity = 26/80 (32.50%), Postives = 40/80 (50.00%), Query Frame = 3 
Query:   75 SRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            S     + GE +   G      SET K+ HVT F+NG +   F+   E+ + I S    T+++QP M + E+ D+   AI
Sbjct:  310 SENLVNTLGEVLQKQGRTQLRISETEKYAHVTFFFNGGKEEPFEG--EDRILINSPKVATYDLQPEMSSAELTDKLVAAI 387
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHEB5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gpmI PE=3 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 2.183e-12
Identity = 25/65 (38.46%), Postives = 38/65 (58.46%), Query Frame = 1 
Query:  292 LTGQRRPSVNPTFHQVRV-NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            LT +   ++  T + V + N PN DMV HTG+ +A V AC A D  +  ++DA+ K GG  ++ A
Sbjct:  379 LTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITA 443

HSP 2 Score: 45.0542 bits (105), Expect = 2.183e-12
Identity = 26/80 (32.50%), Postives = 40/80 (50.00%), Query Frame = 3 
Query:   75 SRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            S     + GE +   G      SET K+ HVT F+NG +   F+   E+ + I S    T+++QP M + E+ D+   AI
Sbjct:  310 SENLVNTLGEVLQKQGRTQLRISETEKYAHVTFFFNGGKEEPFEG--EDRILINSPKVATYDLQPEMSSAELTDKLVAAI 387
The following BLAST results are available for this feature:
BLAST of EY736121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GPMI_CLOD69.973e-1340.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHELP1.295e-1236.112,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEHH1.295e-1240.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB91.295e-1238.462,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PHOPR1.295e-1229.702,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEAE1.681e-1238.162,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEAB1.681e-1238.162,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEA71.681e-1238.162,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB82.183e-1238.462,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEB52.183e-1238.462,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-C01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736121 ID=EY736121; Name=EY736121; organism=Citrus sinensis; type=EST; length=972bp
TGCCCCGTGGCTTTTTTTTTTTTATTTATAAAAAAANGAATAACGTCCGT
ANCCTTGCAGGTACTGGTCCGGAATCCCGTGGATCGACCACGTCGTCCGG
TGAATATGTAGTGCATAATGGTGTCCGTACTTTTGCTTGCAGTGAGACTG
TCAAGTTTGGACATGTCACTTGCTTCTGGAATGGAAACCGCTCTGGGTAT
TTCGACTCGAATTTGGAGGAATATGTGGAAATTCCTAGTGATTCTGGAAT
TACTTTCAATGTACAGCCCACAATGAAGGCTTTGGAGATTGCTGACAGGG
CAAAGAAGGCCATCCGTTAATCCCACGTTCCACCAGGTACGTGTGAACCT
ACCAAATATTGACATGGTGGTGCACACCGGAGATATTGAGGCAGACGTGG
TGGCATGCAATGCTGCTGATAACACTGTCAAAATAATCATTGATGCAATA
CACAAATTTGGTGGAGTATATCTTGTGGAAGCAGGATCATGGCTATGCTG
ACGACATGGTTCGTAAGGAACCCAGTCGGGCGAGGCCCTCCTTCCGGATG
GCATACTTCCCCTCGTCGCGTCCTCACCGCCGTACCCCCCCTCCGGTGCA
TTCCCCGGTCCTCGAGGGCTCAATCCCTTCAGCTCCCCGTTCCGATCGCT
CCTCCGGGGGGGCTCGGCACCCCTGCCAGGAGAATGGGCCCATACCAAGC
GGACTACCTAGTAGGTTAGTACGGCCCAGCCCCGGCCCGCTCGCGCCCTC
GGCCCCCCGCCTCCCCCCTCCACCCCCGGCCCTCCGTCGCACCCCCCCCC
CCCACCCCTCCCGCCCCGCCCACCCCCCCCCCCCCGCCCCCCCCCCCCCC
TCTCGCCCGCCACCCGCCCCCCCCCCCCCCCCCCCCCCACCTCTCGGCTC
CCCCCCCCCCTCACAACCTCCACCCCCCCCCGACCAAACTCTCAACCCGC
CTCCACGCCCCTAATCACACAC
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