EY736121

Overview
NameEY736121
Unique NameEY736121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHESW (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain W3-18-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 2.183e-12
Identity = 26/80 (32.50%), Postives = 41/80 (51.25%), Query Frame = 3 
Query:   75 SRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            S     + GE + + G      SET K+ HVT F+NG +   F+   E+ + I S    T+++QP M + E+ D+   AI
Sbjct:  310 SENLVNTLGEVLQNRGRTQLRISETEKYAHVTFFFNGGKEEPFEG--EDRILINSPKVATYDLQPEMSSTELTDKLVAAI 387

HSP 2 Score: 45.4394 bits (106), Expect = 2.183e-12
Identity = 24/65 (36.92%), Postives = 38/65 (58.46%), Query Frame = 1 
Query:  292 LTGQRRPSVNPTFHQVRV-NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            LT +   ++  T + V + N PN DMV HTG+ +A V AC A D  +  +++A+ K GG  ++ A
Sbjct:  379 LTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDTCIGRVVEALAKVGGECIITA 443
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHESR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain MR-7) GN=gpmI PE=3 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 2.183e-12
Identity = 27/80 (33.75%), Postives = 41/80 (51.25%), Query Frame = 3 
Query:   75 SRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            S     + GE + + G      SET K+ HVT F+NG +   F  N E+ + I S    T+++QP M + E+ D+   AI
Sbjct:  310 SENLVNTLGEVLQNRGRTQLRISETEKYAHVTFFFNGGKEEPF--NGEDRILINSPKVATYDLQPEMSSTELTDKLVAAI 387

HSP 2 Score: 45.4394 bits (106), Expect = 2.183e-12
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 1 
Query:  346 NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            N PN DMV HTG+ +A V AC A D  +  ++DA+ K GG  ++ A
Sbjct:  398 NYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITA 443
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHESM (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain MR-4) GN=gpmI PE=3 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 2.183e-12
Identity = 27/80 (33.75%), Postives = 41/80 (51.25%), Query Frame = 3 
Query:   75 SRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            S     + GE + + G      SET K+ HVT F+NG +   F  N E+ + I S    T+++QP M + E+ D+   AI
Sbjct:  310 SENLVNTLGEVLQNRGRTQLRISETEKYAHVTFFFNGGKEEPF--NGEDRILINSPKVATYDLQPEMSSTELTDKLVAAI 387

HSP 2 Score: 45.4394 bits (106), Expect = 2.183e-12
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 1 
Query:  346 NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            N PN DMV HTG+ +A V AC A D  +  ++DA+ K GG  ++ A
Sbjct:  398 NYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITA 443
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHESA (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella sp. (strain ANA-3) GN=gpmI PE=3 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 2.183e-12
Identity = 27/80 (33.75%), Postives = 41/80 (51.25%), Query Frame = 3 
Query:   75 SRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            S     + GE + + G      SET K+ HVT F+NG +   F  N E+ + I S    T+++QP M + E+ D+   AI
Sbjct:  310 SENLVNTLGEVLQNRGRTQLRISETEKYAHVTFFFNGGKEEPF--NGEDRILINSPKVATYDLQPEMSSTELTDKLVAAI 387

HSP 2 Score: 45.4394 bits (106), Expect = 2.183e-12
Identity = 21/46 (45.65%), Postives = 29/46 (63.04%), Query Frame = 1 
Query:  346 NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            N PN DMV HTG+ +A V AC A D  +  ++DA+ K GG  ++ A
Sbjct:  398 NYPNGDMVGHTGNFDAAVKACEAVDACIGRVVDALAKVGGECIITA 443
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHEPC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=gpmI PE=3 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 2.183e-12
Identity = 26/80 (32.50%), Postives = 41/80 (51.25%), Query Frame = 3 
Query:   75 SRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            S     + GE + + G      SET K+ HVT F+NG +   F+   E+ + I S    T+++QP M + E+ D+   AI
Sbjct:  310 SENLVNTLGEVLQNRGRTQLRISETEKYAHVTFFFNGGKEEPFEG--EDRILINSPKVATYDLQPEMSSTELTDKLVAAI 387

HSP 2 Score: 45.4394 bits (106), Expect = 2.183e-12
Identity = 24/65 (36.92%), Postives = 38/65 (58.46%), Query Frame = 1 
Query:  292 LTGQRRPSVNPTFHQVRV-NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            LT +   ++  T + V + N PN DMV HTG+ +A V AC A D  +  +++A+ K GG  ++ A
Sbjct:  379 LTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDTCIGRVVEALAKVGGECIITA 443
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_THEEB (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Thermosynechococcus elongatus (strain BP-1) GN=gpmI PE=3 SV=1)

HSP 1 Score: 49.2914 bits (116), Expect = 3.678e-12
Identity = 26/72 (36.11%), Postives = 38/72 (52.78%), Query Frame = 3 
Query:   99 GEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            GE +  +G++    +ET K+ HVT F+NG     F    E+ + IPS    T++  P M AL +    KKAI
Sbjct:  312 GEVIAEHGLKQLRAAETEKYAHVTYFFNGGLEEPFPG--EDRILIPSPMVTTYDQAPAMSALAVTQAVKKAI 381

HSP 2 Score: 41.2022 bits (95), Expect = 3.678e-12
Identity = 20/49 (40.82%), Postives = 27/49 (55.10%), Query Frame = 1 
Query:  337 VRVNLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            V VN  N DMV HTG + A + A    D  V ++++A  K GG  L+ A
Sbjct:  389 VVVNFANSDMVGHTGKLAATIQAIETVDRCVGVLVEAATKVGGTLLITA 437
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_PSEF5 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gpmI PE=3 SV=1)

HSP 1 Score: 52.373 bits (124), Expect = 3.681e-12
Identity = 28/72 (38.89%), Postives = 40/72 (55.56%), Query Frame = 3 
Query:   99 GEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            G+Y+  NG      +ET K+ HVT F++G R   F    EE + IPS    T+++QP M A E+ D+   AI
Sbjct:  315 GDYLAKNGKTQLRIAETEKYAHVTFFFSGGREEPFPG--EERILIPSPKVATYDLQPEMSAPEVTDKIVDAI 384

HSP 2 Score: 38.1206 bits (87), Expect = 3.681e-12
Identity = 22/47 (46.81%), Postives = 26/47 (55.32%), Query Frame = 1 
Query:  343 VNLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            VN  N DMV H+G  EA V A    D  V  I+DA+ K GG  L+ A
Sbjct:  394 VNYANGDMVGHSGVFEAAVKAVECLDLCVGRIVDALEKVGGEALITA 440
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_ROSDO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gpmI PE=3 SV=1)

HSP 1 Score: 45.4394 bits (106), Expect = 3.682e-12
Identity = 25/72 (34.72%), Postives = 38/72 (52.78%), Query Frame = 3 
Query:   99 GEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            G++V   G+R +  +ET K+ HVT F NG     FD   E+ +   S    T+++QP M + E+ D    AI
Sbjct:  312 GDWVAQQGLRQYRLAETEKYPHVTFFLNGGEEVSFDG--EDRLMPKSPDVATYDLQPEMSSKEVTDAFVAAI 381

HSP 2 Score: 45.0542 bits (105), Expect = 3.682e-12
Identity = 22/62 (35.48%), Postives = 34/62 (54.84%), Query Frame = 1 
Query:  313 SVNPTFHQVRVNLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEAGSWLC 498
            ++   +  + VN  N DMV HTGD++A + AC A D  +  ++ A+ K GG  +V A    C
Sbjct:  380 AIEEGYDLIVVNYANPDMVGHTGDLQAAMKACEAVDQGLGRVLAALEKAGGAMIVTADHGNC 441
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_SHEON (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Shewanella oneidensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 45.4394 bits (106), Expect = 4.779e-12
Identity = 26/72 (36.11%), Postives = 39/72 (54.17%), Query Frame = 3 
Query:   99 GEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            GE + + G      SET K+ HVT F+NG +   F  N E+ + I S    T+++QP M + E+ D+   AI
Sbjct:  318 GEVLQNRGRTQLRISETEKYAHVTFFFNGGKEEPF--NGEDRILINSPKVATYDLQPEMSSTELTDKLVAAI 387

HSP 2 Score: 44.669 bits (104), Expect = 4.779e-12
Identity = 24/65 (36.92%), Postives = 38/65 (58.46%), Query Frame = 1 
Query:  292 LTGQRRPSVNPTFHQVRV-NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            LT +   ++  T + V + N PN DMV HTG+ +A V AC A D  +  +++A+ K GG  ++ A
Sbjct:  379 LTDKLVAAIESTKYDVIICNYPNGDMVGHTGNFDAAVKACEAVDACIGRVVEALAKVGGECIITA 443
[Close]
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_IDILO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Idiomarina loihiensis GN=gpmI PE=3 SV=1)

HSP 1 Score: 45.8246 bits (107), Expect = 4.780e-12
Identity = 23/52 (44.23%), Postives = 31/52 (59.62%), Query Frame = 1 
Query:  328 FHQVRVNLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            F  V  N PN DMV HTG+ +A V AC A D++V  ++ A+   GG  L+ A
Sbjct:  389 FDVVICNYPNGDMVGHTGNFDAAVKACEAVDHSVGRVVSALEAVGGECLITA 440

HSP 2 Score: 44.2838 bits (103), Expect = 4.780e-12
Identity = 25/72 (34.72%), Postives = 39/72 (54.17%), Query Frame = 3 
Query:   99 GEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            GE++  +       SET K+ HVT F++G R   F+   E+ V IPS    T+++QP M + ++ D    AI
Sbjct:  315 GEWLAKHDKTQLRISETEKYAHVTFFFSGGREQEFEG--EKRVLIPSPKVKTYDLQPEMSSEQLTDELVAAI 384
The following BLAST results are available for this feature:
BLAST of EY736121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GPMI_SHESW2.183e-1232.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESR2.183e-1233.752,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESM2.183e-1233.752,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHESA2.183e-1233.752,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEPC2.183e-1232.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_THEEB3.678e-1236.112,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEF53.681e-1238.892,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ROSDO3.682e-1234.722,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_SHEON4.779e-1236.112,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_IDILO4.780e-1244.232,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-C01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736121 ID=EY736121; Name=EY736121; organism=Citrus sinensis; type=EST; length=972bp
TGCCCCGTGGCTTTTTTTTTTTTATTTATAAAAAAANGAATAACGTCCGT
ANCCTTGCAGGTACTGGTCCGGAATCCCGTGGATCGACCACGTCGTCCGG
TGAATATGTAGTGCATAATGGTGTCCGTACTTTTGCTTGCAGTGAGACTG
TCAAGTTTGGACATGTCACTTGCTTCTGGAATGGAAACCGCTCTGGGTAT
TTCGACTCGAATTTGGAGGAATATGTGGAAATTCCTAGTGATTCTGGAAT
TACTTTCAATGTACAGCCCACAATGAAGGCTTTGGAGATTGCTGACAGGG
CAAAGAAGGCCATCCGTTAATCCCACGTTCCACCAGGTACGTGTGAACCT
ACCAAATATTGACATGGTGGTGCACACCGGAGATATTGAGGCAGACGTGG
TGGCATGCAATGCTGCTGATAACACTGTCAAAATAATCATTGATGCAATA
CACAAATTTGGTGGAGTATATCTTGTGGAAGCAGGATCATGGCTATGCTG
ACGACATGGTTCGTAAGGAACCCAGTCGGGCGAGGCCCTCCTTCCGGATG
GCATACTTCCCCTCGTCGCGTCCTCACCGCCGTACCCCCCCTCCGGTGCA
TTCCCCGGTCCTCGAGGGCTCAATCCCTTCAGCTCCCCGTTCCGATCGCT
CCTCCGGGGGGGCTCGGCACCCCTGCCAGGAGAATGGGCCCATACCAAGC
GGACTACCTAGTAGGTTAGTACGGCCCAGCCCCGGCCCGCTCGCGCCCTC
GGCCCCCCGCCTCCCCCCTCCACCCCCGGCCCTCCGTCGCACCCCCCCCC
CCCACCCCTCCCGCCCCGCCCACCCCCCCCCCCCCGCCCCCCCCCCCCCC
TCTCGCCCGCCACCCGCCCCCCCCCCCCCCCCCCCCCCACCTCTCGGCTC
CCCCCCCCCCTCACAACCTCCACCCCCCCCCGACCAAACTCTCAACCCGC
CTCCACGCCCCTAATCACACAC
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