EY736121

Overview
NameEY736121
Unique NameEY736121
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length972
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_VIBCH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio cholerae GN=gpmI PE=3 SV=1)

HSP 1 Score: 44.2838 bits (103), Expect = 6.497e-11
Identity = 29/84 (34.52%), Postives = 42/84 (50.00%), Query Frame = 3
Query:   66 GPESRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAIR 317
            GP S  +T   GE++   G      SET K+ HVT F+NG     F    EE   + S    T+++QP M + E+ D+   AI+
Sbjct:  307 GPASLENTY--GEWLSKAGKTQLRISETEKYAHVTFFFNGGVENEFPG--EERQLVASPKVATYDLQPEMSSKELTDKLVAAIK 386          

HSP 2 Score: 41.9726 bits (97), Expect = 6.497e-11
Identity = 21/46 (45.65%), Postives = 27/46 (58.70%), Query Frame = 1
Query:  346 NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            N PN DMV HTG  EA V AC A D  +  +++AI +  G  L+ A
Sbjct:  396 NYPNGDMVGHTGVYEAAVKACEAVDECIGRVVEAIKEVDGQLLITA 441          
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_VIBC3 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gpmI PE=3 SV=1)

HSP 1 Score: 44.2838 bits (103), Expect = 6.497e-11
Identity = 29/84 (34.52%), Postives = 42/84 (50.00%), Query Frame = 3
Query:   66 GPESRGSTTSSGEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAIR 317
            GP S  +T   GE++   G      SET K+ HVT F+NG     F    EE   + S    T+++QP M + E+ D+   AI+
Sbjct:  307 GPASLENTY--GEWLSKAGKTQLRISETEKYAHVTFFFNGGVENEFPG--EERQLVASPKVATYDLQPEMSSKELTDKLVAAIK 386          

HSP 2 Score: 41.9726 bits (97), Expect = 6.497e-11
Identity = 21/46 (45.65%), Postives = 27/46 (58.70%), Query Frame = 1
Query:  346 NLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEA 483
            N PN DMV HTG  EA V AC A D  +  +++AI +  G  L+ A
Sbjct:  396 NYPNGDMVGHTGVYEAAVKACEAVDECIGRVVEAIKEVDGQLLITA 441          
BLAST of EY736121 vs. ExPASy Swiss-Prot
Match: GPMI_RHOS4 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gpmI PE=3 SV=1)

HSP 1 Score: 46.2098 bits (108), Expect = 8.433e-11
Identity = 26/72 (36.11%), Postives = 39/72 (54.17%), Query Frame = 3
Query:   99 GEYVVHNGVRTFACSETVKFGHVTCFWNGNRSGYFDSNLEEYVEIPSDSGITFNVQPTMKALEIADRAKKAI 314
            GE+V  +G+R F  +ET K+ HVT F NG R        E+     S    T+++QP M A +++D   +AI
Sbjct:  312 GEWVASHGLRQFRIAETEKYPHVTFFLNGGREA--PETGEDRYMANSPKVATYDLQPEMSAPDVSDHLVEAI 381          

HSP 2 Score: 39.6614 bits (91), Expect = 8.433e-11
Identity = 20/62 (32.26%), Postives = 32/62 (51.61%), Query Frame = 1
Query:  313 SVNPTFHQVRVNLPNIDMVVHTGDIEADVVACNAADNTVKIIIDAIHKFGGVYLVEAGSWLC 498
            ++   +  + VN  N DMV HTGD++A + A    D  +   ++A+ K GG  +V A    C
Sbjct:  380 AIGAGYDLIVVNYANPDMVGHTGDLKAAMAAVEEVDRGLGRAVEAVTKAGGAMIVTADHGNC 441          
The following BLAST results are available for this feature:
BLAST of EY736121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
GPMI_VIBCH6.497e-1134.522,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_VIBC36.497e-1134.522,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_RHOS48.433e-1136.112,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-C01-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736121 ID=EY736121; Name=EY736121; organism=Citrus sinensis; type=EST; length=972bp
TGCCCCGTGGCTTTTTTTTTTTTATTTATAAAAAAANGAATAACGTCCGT
ANCCTTGCAGGTACTGGTCCGGAATCCCGTGGATCGACCACGTCGTCCGG
TGAATATGTAGTGCATAATGGTGTCCGTACTTTTGCTTGCAGTGAGACTG
TCAAGTTTGGACATGTCACTTGCTTCTGGAATGGAAACCGCTCTGGGTAT
TTCGACTCGAATTTGGAGGAATATGTGGAAATTCCTAGTGATTCTGGAAT
TACTTTCAATGTACAGCCCACAATGAAGGCTTTGGAGATTGCTGACAGGG
CAAAGAAGGCCATCCGTTAATCCCACGTTCCACCAGGTACGTGTGAACCT
ACCAAATATTGACATGGTGGTGCACACCGGAGATATTGAGGCAGACGTGG
TGGCATGCAATGCTGCTGATAACACTGTCAAAATAATCATTGATGCAATA
CACAAATTTGGTGGAGTATATCTTGTGGAAGCAGGATCATGGCTATGCTG
ACGACATGGTTCGTAAGGAACCCAGTCGGGCGAGGCCCTCCTTCCGGATG
GCATACTTCCCCTCGTCGCGTCCTCACCGCCGTACCCCCCCTCCGGTGCA
TTCCCCGGTCCTCGAGGGCTCAATCCCTTCAGCTCCCCGTTCCGATCGCT
CCTCCGGGGGGGCTCGGCACCCCTGCCAGGAGAATGGGCCCATACCAAGC
GGACTACCTAGTAGGTTAGTACGGCCCAGCCCCGGCCCGCTCGCGCCCTC
GGCCCCCCGCCTCCCCCCTCCACCCCCGGCCCTCCGTCGCACCCCCCCCC
CCCACCCCTCCCGCCCCGCCCACCCCCCCCCCCCCGCCCCCCCCCCCCCC
TCTCGCCCGCCACCCGCCCCCCCCCCCCCCCCCCCCCCACCTCTCGGCTC
CCCCCCCCCCTCACAACCTCCACCCCCCCCCGACCAAACTCTCAACCCGC
CTCCACGCCCCTAATCACACAC
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