EY736107

Overview
NameEY736107
Unique NameEY736107
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length495
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL11_BURPS (50S ribosomal protein L11 OS=Burkholderia pseudomallei GN=rplK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = -3 
Query:  206 KVGX*TRGKLEDIAKAKAPILTAADLDAAVRTIXGSAGSMGITVEGI 346
            KVG  TR + E+IAK K P LTAADLDAAVRTI GSA SMGITVEG+
Sbjct:   97 KVGKITRAQAEEIAKTKMPDLTAADLDAAVRTIAGSARSMGITVEGV 143
[Close]
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL11_BURP8 (50S ribosomal protein L11 OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=rplK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = -3 
Query:  206 KVGX*TRGKLEDIAKAKAPILTAADLDAAVRTIXGSAGSMGITVEGI 346
            KVG  TR + E+IAK K P LTAADLDAAVRTI GSA SMGITVEG+
Sbjct:   97 KVGKITRAQAEEIAKTKMPDLTAADLDAAVRTIAGSARSMGITVEGV 143
[Close]
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL11_BURP6 (50S ribosomal protein L11 OS=Burkholderia pseudomallei (strain 668) GN=rplK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = -3 
Query:  206 KVGX*TRGKLEDIAKAKAPILTAADLDAAVRTIXGSAGSMGITVEGI 346
            KVG  TR + E+IAK K P LTAADLDAAVRTI GSA SMGITVEG+
Sbjct:   97 KVGKITRAQAEEIAKTKMPDLTAADLDAAVRTIAGSARSMGITVEGV 143
[Close]
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL11_BURP1 (50S ribosomal protein L11 OS=Burkholderia pseudomallei (strain 1710b) GN=rplK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = -3 
Query:  206 KVGX*TRGKLEDIAKAKAPILTAADLDAAVRTIXGSAGSMGITVEGI 346
            KVG  TR + E+IAK K P LTAADLDAAVRTI GSA SMGITVEG+
Sbjct:   97 KVGKITRAQAEEIAKTKMPDLTAADLDAAVRTIAGSARSMGITVEGV 143
[Close]
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL11_BURP0 (50S ribosomal protein L11 OS=Burkholderia pseudomallei (strain 1106a) GN=rplK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = -3 
Query:  206 KVGX*TRGKLEDIAKAKAPILTAADLDAAVRTIXGSAGSMGITVEGI 346
            KVG  TR + E+IAK K P LTAADLDAAVRTI GSA SMGITVEG+
Sbjct:   97 KVGKITRAQAEEIAKTKMPDLTAADLDAAVRTIAGSARSMGITVEGV 143
[Close]
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL11_BURMS (50S ribosomal protein L11 OS=Burkholderia mallei (strain SAVP1) GN=rplK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = -3 
Query:  206 KVGX*TRGKLEDIAKAKAPILTAADLDAAVRTIXGSAGSMGITVEGI 346
            KVG  TR + E+IAK K P LTAADLDAAVRTI GSA SMGITVEG+
Sbjct:   97 KVGKITRAQAEEIAKTKMPDLTAADLDAAVRTIAGSARSMGITVEGV 143
[Close]
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL11_BURMA (50S ribosomal protein L11 OS=Burkholderia mallei GN=rplK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = -3 
Query:  206 KVGX*TRGKLEDIAKAKAPILTAADLDAAVRTIXGSAGSMGITVEGI 346
            KVG  TR + E+IAK K P LTAADLDAAVRTI GSA SMGITVEG+
Sbjct:   97 KVGKITRAQAEEIAKTKMPDLTAADLDAAVRTIAGSARSMGITVEGV 143
[Close]
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL11_BURM9 (50S ribosomal protein L11 OS=Burkholderia mallei (strain NCTC 10229) GN=rplK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = -3 
Query:  206 KVGX*TRGKLEDIAKAKAPILTAADLDAAVRTIXGSAGSMGITVEGI 346
            KVG  TR + E+IAK K P LTAADLDAAVRTI GSA SMGITVEG+
Sbjct:   97 KVGKITRAQAEEIAKTKMPDLTAADLDAAVRTIAGSARSMGITVEGV 143
[Close]
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL11_BURM7 (50S ribosomal protein L11 OS=Burkholderia mallei (strain NCTC 10247) GN=rplK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = -3 
Query:  206 KVGX*TRGKLEDIAKAKAPILTAADLDAAVRTIXGSAGSMGITVEGI 346
            KVG  TR + E+IAK K P LTAADLDAAVRTI GSA SMGITVEG+
Sbjct:   97 KVGKITRAQAEEIAKTKMPDLTAADLDAAVRTIAGSARSMGITVEGV 143
[Close]
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL11_BURM1 (50S ribosomal protein L11 OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=rplK PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 35/47 (74.47%), Postives = 38/47 (80.85%), Query Frame = -3 
Query:  206 KVGX*TRGKLEDIAKAKAPILTAADLDAAVRTIXGSAGSMGITVEGI 346
            KVG  TR + E+IAK K P LTAADLDAAVRTI GSA SMGITVEG+
Sbjct:   97 KVGSITRAQAEEIAKTKMPDLTAADLDAAVRTIAGSARSMGITVEGV 143
The following BLAST results are available for this feature:
BLAST of EY736107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL11_BURPS8.965e-1174.4750S ribosomal protein L11 OS=Burkholderia pseudoma... [more]
RL11_BURP88.965e-1174.4750S ribosomal protein L11 OS=Burkholderia phymatum... [more]
RL11_BURP68.965e-1174.4750S ribosomal protein L11 OS=Burkholderia pseudoma... [more]
RL11_BURP18.965e-1174.4750S ribosomal protein L11 OS=Burkholderia pseudoma... [more]
RL11_BURP08.965e-1174.4750S ribosomal protein L11 OS=Burkholderia pseudoma... [more]
RL11_BURMS8.965e-1174.4750S ribosomal protein L11 OS=Burkholderia mallei (... [more]
RL11_BURMA8.965e-1174.4750S ribosomal protein L11 OS=Burkholderia mallei G... [more]
RL11_BURM98.965e-1174.4750S ribosomal protein L11 OS=Burkholderia mallei (... [more]
RL11_BURM78.965e-1174.4750S ribosomal protein L11 OS=Burkholderia mallei (... [more]
RL11_BURM18.965e-1174.4750S ribosomal protein L11 OS=Burkholderia multivor... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-012-A09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736107 ID=EY736107; Name=EY736107; organism=Citrus sinensis; type=EST; length=495bp
GCGGGCAGCACGACCGAACCGCGGACCAGTTGGTCCGACTTCTTCGGGTC
GATGCCCAGCTGCACGGCCACGTCAATCGATTCGTTGAACTTGGCGACAG
CGGTTTCCTTGACCANGGTCAGGGCTTCGGCGAACGGGTACAGCTTGGTG
CGGTCGATCTTTTGCGCAATGGCGGCGGCGCGCTTGCTCAGTTTTGCCAT
GATTAAATCCCCTCAACCGTGATGCCCATGCTGCCGGCGCTGCCANCGAT
CGTGCGGACGGCGGCGTCCAAATCAGCGGCGGTCAAAATGGGGGCCTTGG
CCTTGGCGATGTCTTCTAGCTTCCCCCGGGTTCACNTNCCTACTTTGTGG
GATTCCAGGGGGACGAACCCTTTGGGCGCGGCGGGCGTGGTGGGTGACGA
CANCAAGGGGGGGGTCTTCGGAACCACTGGGACGCCGGTGTGGCGGAGCG
GGGGGGGGCGCGGGACGCGGGCCAAGAACACTGGCGGGGTCCTTA
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