EY736107
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL1_METFK (50S ribosomal protein L1 OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=rplA PE=3 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 6.410e-17 Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = -2 Query: 3 MAKLSKRAAAIAQKIDRTKLYPFAEALTXVKETAVAKFNESIDVAVQLGIDPKKSDQLVRGSVVLP 200 MA +SKR A+ K+DR K+YP EAL VKETA AKF+ES+D + LGID +KSDQLVRG++VLP Sbjct: 1 MANVSKRIKALRAKVDRNKVYPVTEALALVKETATAKFDESVDAVINLGIDARKSDQLVRGALVLP 66
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL1_PELPD (50S ribosomal protein L1 OS=Pelobacter propionicus (strain DSM 2379) GN=rplA PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 8.371e-17 Identity = 39/66 (59.09%), Postives = 56/66 (84.85%), Query Frame = -2 Query: 3 MAKLSKRAAAIAQKIDRTKLYPFAEALTXVKETAVAKFNESIDVAVQLGIDPKKSDQLVRGSVVLP 200 M+K +K+ AA ++KIDRTK+YP A A+ VK+ A AKF+E++DVAV+LG+DP+ +DQ+VRG+VVLP Sbjct: 1 MSKTAKKLAAASEKIDRTKVYPVAAAIDVVKQAAYAKFDETVDVAVRLGVDPRHADQMVRGAVVLP 66
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL1_THIDA (50S ribosomal protein L1 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=rplA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.428e-16 Identity = 41/66 (62.12%), Postives = 54/66 (81.82%), Query Frame = -2 Query: 3 MAKLSKRAAAIAQKIDRTKLYPFAEALTXVKETAVAKFNESIDVAVQLGIDPKKSDQLVRGSVVLP 200 MA +SKR A+ +KIDR++ YP +AL VK++A AKF+ESIDVAV LG+D +KSDQ+VRG+VVLP Sbjct: 1 MANVSKRLRALKEKIDRSRNYPVVDALQLVKDSATAKFDESIDVAVNLGVDARKSDQMVRGAVVLP 66
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL1_RHOFD (50S ribosomal protein L1 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=rplA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.428e-16 Identity = 43/66 (65.15%), Postives = 52/66 (78.79%), Query Frame = -2 Query: 3 MAKLSKRAAAIAQKIDRTKLYPFAEALTXVKETAVAKFNESIDVAVQLGIDPKKSDQLVRGSVVLP 200 M +L+K+ + K+D KLYP A+AL VKE A AKF+ESIDVAVQLGID KKSDQ+VRG+VVLP Sbjct: 1 MTQLTKKQKSFQGKVDSNKLYPLADALGLVKECATAKFDESIDVAVQLGIDAKKSDQVVRGAVVLP 66
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL1_VEREI (50S ribosomal protein L1 OS=Verminephrobacter eiseniae (strain EF01-2) GN=rplA PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.865e-16 Identity = 42/66 (63.64%), Postives = 53/66 (80.30%), Query Frame = -2 Query: 3 MAKLSKRAAAIAQKIDRTKLYPFAEALTXVKETAVAKFNESIDVAVQLGIDPKKSDQLVRGSVVLP 200 M +L+K+ A+ K+D T+LY F +AL VK+ A AKF+ESIDVAVQLGID KKSDQ+VRG+VVLP Sbjct: 1 MPQLTKKQKAMQGKVDSTRLYAFTDALVLVKQAATAKFDESIDVAVQLGIDAKKSDQVVRGAVVLP 66
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL1_SHEAM (50S ribosomal protein L1 OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=rplA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16 Identity = 41/66 (62.12%), Postives = 51/66 (77.27%), Query Frame = -2 Query: 3 MAKLSKRAAAIAQKIDRTKLYPFAEALTXVKETAVAKFNESIDVAVQLGIDPKKSDQLVRGSVVLP 200 MAKL+KR I +K+D TK Y EA+T +KE A AKF ES+DVAV LG+DP+KSDQ VRG++VLP Sbjct: 1 MAKLTKRMRVIREKVDATKAYDINEAITLLKELATAKFVESVDVAVNLGVDPRKSDQNVRGAIVLP 66
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL1_LEPCP (50S ribosomal protein L1 OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=rplA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 2.436e-16 Identity = 43/66 (65.15%), Postives = 53/66 (80.30%), Query Frame = -2 Query: 3 MAKLSKRAAAIAQKIDRTKLYPFAEALTXVKETAVAKFNESIDVAVQLGIDPKKSDQLVRGSVVLP 200 MAKL+KR A KI+ TKLY +A+ +KE AVAKF+ESIDVAVQLG+D KKSDQ+VRG+VV+P Sbjct: 1 MAKLTKRQKAQVGKIETTKLYAVDDAIALIKEFAVAKFDESIDVAVQLGVDAKKSDQVVRGAVVMP 66
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL1_NITOC (50S ribosomal protein L1 OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=rplA PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 3.181e-16 Identity = 41/66 (62.12%), Postives = 49/66 (74.24%), Query Frame = -2 Query: 3 MAKLSKRAAAIAQKIDRTKLYPFAEALTXVKETAVAKFNESIDVAVQLGIDPKKSDQLVRGSVVLP 200 MAKL KR I +K++ KLYP EAL +KE A KF ES+DVAV LG+DP+KSDQ+VRGS VLP Sbjct: 1 MAKLGKRLVGIREKLEPGKLYPVEEALNLLKEVAKVKFEESVDVAVNLGVDPRKSDQVVRGSTVLP 66
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL1_SHEFN (50S ribosomal protein L1 OS=Shewanella frigidimarina (strain NCIMB 400) GN=rplA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.155e-16 Identity = 42/66 (63.64%), Postives = 51/66 (77.27%), Query Frame = -2 Query: 3 MAKLSKRAAAIAQKIDRTKLYPFAEALTXVKETAVAKFNESIDVAVQLGIDPKKSDQLVRGSVVLP 200 MAKL+KRA I +K+D TKLY EA+ ++E A AKF ES+DVAV LGIDP+KSDQ VRG+ VLP Sbjct: 1 MAKLTKRARVIREKVDATKLYDINEAVVLLQELATAKFVESVDVAVNLGIDPRKSDQNVRGATVLP 66
BLAST of EY736107 vs. ExPASy Swiss-Prot
Match: RL1_CHRVO (50S ribosomal protein L1 OS=Chromobacterium violaceum GN=rplA PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 4.155e-16 Identity = 41/66 (62.12%), Postives = 50/66 (75.76%), Query Frame = -2 Query: 3 MAKLSKRAAAIAQKIDRTKLYPFAEALTXVKETAVAKFNESIDVAVQLGIDPKKSDQLVRGSVVLP 200 MAK+SKR + +DR KLY EA+ VK A AKF+ESID+AV LG+DP+KSDQ+VRGSVVLP Sbjct: 1 MAKISKRLQNLKATVDRNKLYAVDEAIALVKAAATAKFDESIDIAVNLGVDPRKSDQVVRGSVVLP 66 The following BLAST results are available for this feature:
BLAST of EY736107 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736107 ID=EY736107; Name=EY736107; organism=Citrus sinensis; type=EST; length=495bpback to top |