EY736091

Overview
NameEY736091
Unique NameEY736091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length528
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: Y1056_DESVH (Putative ABC transporter ATP-binding protein DVU_1056 OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=DVU_1056 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.057e-11
Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 2
Query:    2 LKVLAGLLKPTNGHVY--------------VKRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            L +  GLL+P +G V+              ++R   F+FQN D Q+  PTV  DVAFG  NL L+ ++ R +  + L  +G+  +  R    LSGG+K+ VA+A  L
Sbjct:   54 LHIAMGLLRPESGTVHHRNAVAHDEASLAALRRDIGFLFQNADDQLFCPTVLEDVAFGPLNLGLSPEQARERATQTLQGLGLEGFGARVTHRLSGGEKKMVALASVL 160          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO_SALTY (Cobalt import ATP-binding protein cbiO OS=Salmonella typhimurium GN=cbiO PE=3 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 8.057e-11
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 2
Query:   11 LAGLLKPTNGHV--------YVKR-------PKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            L+GLL+P  G V        Y KR         + VFQ+P+ Q+    +++D+AF L NL +   E+  +V +AL  V   ++  +P+  LS GQK+RVAIAGAL
Sbjct:   47 LSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGAL 151          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO_SALTI (Cobalt import ATP-binding protein cbiO OS=Salmonella typhi GN=cbiO PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.057e-11
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 2
Query:   11 LAGLLKPTNGHV--------YVKR-------PKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            L+GLL+P  G V        Y KR         + VFQ+P+ Q+    +++D+AF L NL +   E+  +V +AL  V   ++  +P+  LS GQK+RVAIAGAL
Sbjct:   47 LSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGAL 151          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO_SALPA (Cobalt import ATP-binding protein cbiO OS=Salmonella paratyphi A GN=cbiO PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.057e-11
Identity = 40/105 (38.10%), Postives = 59/105 (56.19%), Query Frame = 2
Query:   11 LAGLLKPTNGHV--------YVKR-------PKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMSNYLQRPVXTLSGGQKQRVAIAGAL 280
            L+GLL+P  G V        Y KR         + VFQ+P+ Q+    +++D+AF L NL +   E+  +V +AL  V   ++  +P+  LS GQK+RVAIAGAL
Sbjct:   47 LSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQPIQCLSHGQKKRVAIAGAL 151          
BLAST of EY736091 vs. ExPASy Swiss-Prot
Match: CBIO2_BACC1 (Cobalt import ATP-binding protein cbiO 2 OS=Bacillus cereus (strain ATCC 10987) GN=cbiO2 PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 8.057e-11
Identity = 41/108 (37.96%), Postives = 57/108 (52.78%), Query Frame = 2
Query:   11 LAGLLKPTNGHVYV-----------------KRPKSFVFQNPDHQVVMPTVEADVAFGLGNLNLTHDEVRSKVAKALDAVGMS-NYLQRPVXTLSGGQKQRVAIAGAL 280
            L GLL+PTNG V +                 ++    VFQ P+HQ+   TVE D+ FG  N  ++ +E + K  +A++ VG+    L R    LSGGQ +RVAIAG L
Sbjct:   53 LNGLLQPTNGTVQIGEHFISAGKKEKKLKPLRKKVGVVFQFPEHQLFEETVEKDICFGPTNFGVSVEEAKQKAREAIELVGLEPELLARSPFELSGGQMRRVAIAGVL 160          
The following BLAST results are available for this feature:
BLAST of EY736091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
Y1056_DESVH8.057e-1135.51Putative ABC transporter ATP-binding protein DVU_1... [more]
CBIO_SALTY8.057e-1138.10Cobalt import ATP-binding protein cbiO OS=Salmonel... [more]
CBIO_SALTI8.057e-1138.10Cobalt import ATP-binding protein cbiO OS=Salmonel... [more]
CBIO_SALPA8.057e-1138.10Cobalt import ATP-binding protein cbiO OS=Salmonel... [more]
CBIO2_BACC18.057e-1137.96Cobalt import ATP-binding protein cbiO 2 OS=Bacill... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-H04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736091 ID=EY736091; Name=EY736091; organism=Citrus sinensis; type=EST; length=528bp
TTTGAAGGTCTTGGCAGGTCTTTTGAAACCAACAAATGGGCATGTGTATG
TCAAAAGGCCTAAGAGTTTTGTTTTCCAAAATCCTGACCATCAGGTAGTG
ATGCCTACGGTAGAAGCTGATGTGGCATTTGGCCTAGGTAATCTGAATCT
GACTCATGATGAAGTCAGATCCAAGGTGGCAAAAGCATTGGATGCTGTTG
GCATGTCTAACTACTTGCAGAGACCAGTTCANACTCTCAGTGGCGGTCAG
AAACAAAGGGTTGCAATTGCTGGTGCTTTANCTGAAGCATGTAAGGGTGT
TGCTACTGGGATGAGCTCACAACATTTCTGGATGAAAGTGATCAGTTGGG
GGGTGATTGAAGCGGGTAAAAAATTTGTTGGGGTGATTCTGGGAGAAGTT
ACAGCCTTTGTGGGGTTACCCATCGGGTTAGAAGAGCTCGAGTATGCTGA
TGGGTGCTTTTACATGGGAAGATGGAAAGATTGTTATGCAAGCGGATGGA
GTAAGCATATTAAATTTCATTAAAAGTC
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