EY736057

Overview
NameEY736057
Unique NameEY736057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_MYCBO (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium bovis GN=gap PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 8.563e-13
Identity = 40/104 (38.46%), Postives = 62/104 (59.62%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKD---SPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNR-GPPPPPGAELGIDIPIQGTGL 684
            ++V INGFGRIGRNF R    +++   + ++VV  ND       +HL+K+DS+LG    DV +   +T+ V    IK ++ R GP   P  +LG+D+ ++ TGL
Sbjct:    3 VRVGINGFGRIGRNFYRALLAQQEQGTADVEVVAANDITDNSTLAHLLKFDSILGRLPCDVGLEGDDTIVVGRAKIKALAVREGPAALPWGDLGVDVVVESTGL 106          

HSP 2 Score: 21.1718 bits (43), Expect = 8.563e-13
Identity = 11/22 (50.00%), Postives = 12/22 (54.55%), Query Frame = 3
Query:  696 APVAGSAIHAGAKKVITRGPPT 761
            A  A   + AGAKKVI   P T
Sbjct:  110 AAKAKGHLDAGAKKVIISAPAT 131          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P2_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Bacillus subtilis GN=gapB PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.112e-12
Identity = 40/100 (40.00%), Postives = 60/100 (60.00%), Query Frame = 1
Query:  382 KLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            K+KVAINGFGRIGR   R      D  + VV +N S   E  +HL+KYD++ G +  +V +   ++L V+GK + ++++R P   P  E  IDI ++ TG
Sbjct:    2 KVKVAINGFGRIGRMVFR--KAMLDDQIQVVAINASYSAETLAHLIKYDTIHGRYDKEV-VAGEDSLIVNGKKVLLLNSRDPKQLPWREYDIDIVVEATG 98          

HSP 2 Score: 20.4014 bits (41), Expect = 1.112e-12
Identity = 9/13 (69.23%), Postives = 9/13 (69.23%), Query Frame = 3
Query:  717 IHAGAKKVITRGP 755
            I AGAKKVI   P
Sbjct:  110 IEAGAKKVILTAP 122          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_BACST (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus stearothermophilus GN=gap PE=1 SV=5)

HSP 1 Score: 73.559 bits (179), Expect = 1.445e-12
Identity = 43/99 (43.43%), Postives = 58/99 (58.59%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +KV INGFGRIGRN  R     K+  ++VV VND       +HL+KYDS+ G   A+V  V+   L V+GK I V + R P      E+G+DI ++ TG
Sbjct:    3 VKVGINGFGRIGRNVFRA--ALKNPDIEVVAVNDLTDANTLAHLLKYDSVHGRLDAEVS-VNGNNLVVNGKEIIVKAERDPENLAWGEIGVDIVVESTG 98          

HSP 2 Score: 20.4014 bits (41), Expect = 1.445e-12
Identity = 9/17 (52.94%), Postives = 10/17 (58.82%), Query Frame = 3
Query:  705 AGSAIHAGAKKVITRGP 755
            A   + AGAKKVI   P
Sbjct:  106 AAKHLEAGAKKVIISAP 122          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_BACCO (Glyceraldehyde-3-phosphate dehydrogenase OS=Bacillus coagulans GN=gap PE=1 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.445e-12
Identity = 42/100 (42.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVND-SGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +KV INGFGRIGRN  R     K+  ++VV VND +   +  +HL+KYDS+ G  + D ++V ++ +SV+GK I V + R P      E+G+DI ++ TG
Sbjct:    3 VKVGINGFGRIGRNVFRA--AVKNPDIEVVAVNDLTANADGLAHLLKYDSVHG--RLDAEVVVNDGVSVNGKEIIVKAERNPENLAWGEIGVDIVVESTG 98          

HSP 2 Score: 20.4014 bits (41), Expect = 1.445e-12
Identity = 9/17 (52.94%), Postives = 10/17 (58.82%), Query Frame = 3
Query:  705 AGSAIHAGAKKVITRGP 755
            A   + AGAKKVI   P
Sbjct:  106 AAKHLEAGAKKVIISAP 122          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.876e-12
Identity = 41/100 (41.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            +K+ INGFGRIGR   R    R D  ++VV +ND   VE  ++++KYDS  G F   V++ D   L V+GK I+V + R P       +G+DI ++ TGL
Sbjct:    3 IKIGINGFGRIGRIVFRAAQHRDD--IEVVGINDLIDVEYMAYMLKYDSTHGRFDGTVEVKD-GNLVVNGKTIRVTAERDPANLNWGAIGVDIAVEATGL 99          

HSP 2 Score: 22.3274 bits (46), Expect = 1.876e-12
Identity = 11/21 (52.38%), Postives = 12/21 (57.14%), Query Frame = 3
Query:  693 TAPVAGSAIHAGAKKVITRGP 755
            T   A   I AGAKKV+  GP
Sbjct:  102 TDETARKHITAGAKKVVLTGP 122          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_BUCBP (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Baizongia pistaciae GN=gapA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.877e-12
Identity = 36/100 (36.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            +K+ INGFGRIGR   R    R  S ++++ +ND   V+  ++++KYDS+ G F   + ++ +ETL V+GK I++ + + P      +L ID+ I+ TG+
Sbjct:    3 IKIGINGFGRIGRVLFRLAQLR--SNIEILAINDLINVQYIAYMLKYDSIHGNFNGKI-VIKNETLFVNGKKIRITNEKDPKNLMWGDLNIDVVIESTGI 99          

HSP 2 Score: 23.0978 bits (48), Expect = 1.877e-12
Identity = 10/14 (71.43%), Postives = 10/14 (71.43%), Query Frame = 3
Query:  717 IHAGAKKVITRGPP 758
            I AGAKKVI   PP
Sbjct:  110 IQAGAKKVIITSPP 123          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_MYCLE (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycobacterium leprae GN=gapA PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.436e-12
Identity = 38/104 (36.54%), Postives = 62/104 (59.62%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKD---SPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNR-GPPPPPGAELGIDIPIQGTGL 684
            ++V INGFGRIGRNF R    +++   + + VV +ND       ++L+K+DS+LG    DV + + +T+ V  + IK ++ R GP   P    G+D+ ++ TGL
Sbjct:    3 VRVGINGFGRIGRNFYRALLAQQEHGIADVQVVAINDITDNSTLAYLLKFDSILGRLPHDVSLEEEDTIVVGSEKIKALAVREGPAALPWHAFGVDVVVESTGL 106          

HSP 2 Score: 21.9422 bits (45), Expect = 2.436e-12
Identity = 11/22 (50.00%), Postives = 12/22 (54.55%), Query Frame = 3
Query:  696 APVAGSAIHAGAKKVITRGPPT 761
            A  A   + AGAKKVI   P T
Sbjct:  110 AAKAKGHLEAGAKKVIVSAPAT 131          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_THEAQ (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermus aquaticus GN=gap PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.438e-12
Identity = 40/100 (40.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            +KV INGFGRIGR   R  H R    ++V ++ND    +  +HL+KYDS+   F  +V   D + L VDGK I+  + + P   P AE G+ + I+ TG+
Sbjct:    1 MKVGINGFGRIGRQVFRILHSRG---VEVALINDLTDNKTLAHLLKYDSIYHRFPGEVAY-DDQYLYVDGKAIRATAVKDPKEIPWAEAGVGVVIESTGV 96          

HSP 2 Score: 20.4014 bits (41), Expect = 2.438e-12
Identity = 10/23 (43.48%), Postives = 12/23 (52.17%), Query Frame = 3
Query:  696 APVAGSAIHAGAKKVITRGPPTG 764
            A  A + +  GAKKVI   P  G
Sbjct:  100 ADKAKAHLEGGAKKVIITAPAKG 122          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_MYCPN (Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoplasma pneumoniae GN=gapA PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.113e-12
Identity = 43/99 (43.43%), Postives = 59/99 (59.60%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            ++VAINGFGRIGR   R    +K+  +++V VND    +  +HL+KYDS  G FK  V   D+ TL +D K + V S + P   P AE  IDI ++ TG
Sbjct:    8 IRVAINGFGRIGRLVFRALLSQKN--IEIVAVNDLTHPDTLAHLLKYDSAHGEFKKKVVAKDN-TLMIDKKKVLVFSEKDPANLPWAEHNIDIVVESTG 103          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 72.7886 bits (177), Expect = 3.113e-12
Identity = 43/103 (41.75%), Postives = 61/103 (59.22%), Query Frame = 1
Query:  376 VAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            +AKLKV INGFGRIGR  LR   G  +  ++ V +ND    +N ++L+KYDS  G  ++ V+  D + + +DG  I  VS R P   P  +LG D  ++ TGL
Sbjct:    1 MAKLKVGINGFGRIGRLVLRA--GINNPNIEFVGINDLVPPDNLAYLLKYDSTHGKLRSQVEAKD-DGIVIDGHFIPCVSVRNPAELPWGKLGADYVVESTGL 100          
The following BLAST results are available for this feature:
BLAST of EY736057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
G3P_MYCBO8.563e-1338.46Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoba... [more]
G3P2_BACSU1.112e-1240.00Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Baci... [more]
G3P_BACST1.445e-1243.43Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3P_BACCO1.445e-1242.00Glyceraldehyde-3-phosphate dehydrogenase OS=Bacill... [more]
G3P_HAEIN1.876e-1241.00Glyceraldehyde-3-phosphate dehydrogenase OS=Haemop... [more]
G3P_BUCBP1.877e-1236.00Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3P_MYCLE2.436e-1236.54Glyceraldehyde-3-phosphate dehydrogenase OS=Mycoba... [more]
G3P_THEAQ2.438e-1240.00Glyceraldehyde-3-phosphate dehydrogenase OS=Thermu... [more]
G3P_MYCPN3.113e-1243.43Glyceraldehyde-3-phosphate dehydrogenase OS=Mycopl... [more]
G3P1_ANAVT3.113e-1241.75Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-E02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736057 ID=EY736057; Name=EY736057; organism=Citrus sinensis; type=EST; length=920bp
CCGCCGCCCCCGCAACGCGGTAACCTTGCAGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCACGCCGTCGAGAACTTAGTCTCTCAGCTTTAGAAGTTGCA
GCAAATCAGCAACTAAGCCACAGGGCATGGCCAGTCACTCAGCTCTTGCT
CCCTCAAGAATCCCGGCCATCACTAGGATTCCATCCAAGACTACTCACTC
TTTTCCCACTCAATGCTCCACCAAGAGGCTGGATGTGGCTGAATTCGCTG
GCCTTCGAGCAAATGCAGGCGCGACATACGCCACTGGTGCTAGAGATGCA
TCCTTCTTTGATGCTGTGACTGCTCAACTTACTCCTAAGGTTGCAGCAGG
ATCAGTTCCTGTAAAGAAAGAAACCGTGGCCAAATTGAAGGTGGCAATTA
ATGGATTTGGACGTATTGGCAGGAACTTCCTCCGATGCTGGCACGGCAGG
AAAGACTCACCCCTTGATGTTGTTGTTGTCAATGACAGTGGTGGTGTCGA
GAATGCTTCACACCTTGTAAAATATGACTCATTGCTTGGAACTTTTAAAG
CAGACGTGAAAATAGTGGACCACGAGACCCTCTCTGTCGATGGTAAGCTC
ATCAAGGTTGTCTCTAACAGGGGACCTCCCCCCCCCCCTGGGGCTGAGCT
CGGAATTGACATCCCTATTCAGGGAACCGGACTCTCCGGTGGACGGCCCC
TGTGGCGGGAAGCGCGATCCACGCTGGTGCCAAGAAAGTAATTACCCGTG
GGCCCCCCACAGGGGGCGAAAATGTCCACCCATCTGTCGGTGGGGGTCGC
CGACCACGGTCCCCGAGCCCCACGTTCCCCCCATTGCTCCGCACCCCTCC
CCGCCCCACCCGCGGGGCCGCCGCCCCCCGCCACCGTCCCCACCCCCAAA
CTCTGGGTGGTGCTCGGACC
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