EY736057

Overview
NameEY736057
Unique NameEY736057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3PC_LEIME (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Leishmania mexicana GN=GAPC PE=3 SV=3)

HSP 1 Score: 67.0106 bits (162), Expect = 1.168e-11
Identity = 39/100 (39.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            +KV INGFGRIGR   R    R D  +++V +ND    E  ++ +KYDS  G F   V+++    L V+GK I+V S R P      E+G+++ ++ TGL
Sbjct:    2 VKVGINGFGRIGRVVFRAAQMRPD--IEIVGINDLLDAEYMAYSLKYDSTHGRFDGTVEVIKG-ALVVNGKSIRVTSERDPANLKWDEIGVEVVVESTGL 98          

HSP 2 Score: 23.8682 bits (50), Expect = 1.168e-11
Identity = 10/22 (45.45%), Postives = 13/22 (59.09%), Query Frame = 3
Query:  693 TAPVAGSAIHAGAKKVITRGPP 758
            T   A   I AGA++V+  GPP
Sbjct:  101 TQETAHKHIEAGARRVVMTGPP 122          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: E4PD_PROMH (D-erythrose-4-phosphate dehydrogenase OS=Proteus mirabilis (strain HI4320) GN=epd PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 1.183e-11
Identity = 40/105 (38.10%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRC-WHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGLSGGR 696
            ++VAINGFGRIGRN LR  +   K + + VV +N+       +HL+KYDS  G F  D++ V+++ L V    I++  +      P  ELGID+ +  +G+ G R
Sbjct:    3 IRVAINGFGRIGRNVLRALYESGKRAEISVVAINELADATGIAHLLKYDSSHGRFAWDIR-VNNDLLQVGDDAIRLFHHADIADLPWGELGIDVVLDCSGVYGSR 106          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_CANAL (Glyceraldehyde-3-phosphate dehydrogenase OS=Candida albicans GN=TDH1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.545e-11
Identity = 43/101 (42.57%), Postives = 59/101 (58.42%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            +K+ INGFGRIGR  LR   GRKD  ++VV VND     + A+++ KYDS  G +K +V     + L +DG  IKV   R P   P  + G+D  I+ TG+
Sbjct:    3 IKIGINGFGRIGRLVLRVALGRKD--IEVVAVNDPFIAPDYAAYMFKYDSTHGRYKGEV-TASGDDLVIDGHKIKVFQERDPANIPWGKSGVDYVIESTGV 100          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: E4PD_ALTMD (D-erythrose-4-phosphate dehydrogenase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=epd PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.018e-11
Identity = 39/100 (39.00%), Postives = 62/100 (62.00%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRC-WHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            + +AINGFGRIGRN LR  +   +++  +VV +ND    E  +HL+KYD+  G F+ DV + ++ TL+V G  I +++       P  +LG+DI ++ TG
Sbjct:    2 VNIAINGFGRIGRNVLRALYESGRNNEFNVVAINDIAKPEGIAHLLKYDTAHGRFRFDVAL-ENNTLNVAGDDIALLAISDIKELPWRDLGVDIVLECTG 100          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_ASHGO (Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya gossypii GN=GPD PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11
Identity = 44/101 (43.56%), Postives = 60/101 (59.41%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            +KVAING G+IGR  +R    R +  ++VV +ND    V+ A+++ KYDS  G +  DV+  +  TL +DGK IKV   R P   P  E GIDI I  TG+
Sbjct:    2 VKVAINGLGKIGRLVMRIALSRAN--VEVVAINDPFITVDYAAYMFKYDSTHGKYAGDVQY-EGNTLVIDGKKIKVFQERDPAQLPWGEEGIDIAIDSTGV 99          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P2_RHOSH (Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhodobacter sphaeroides GN=gapB PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11
Identity = 42/100 (42.00%), Postives = 61/100 (61.00%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            ++VAINGFGRIGRN LR       + ++VV +ND G VE  +HL+++DS+ G F A V   D + + V    IKV + R P   P A  G+D+ ++ TG+
Sbjct:    3 IRVAINGFGRIGRNVLRAIVESGRTDIEVVAINDLGQVETNAHLLRFDSVHGRFPAKVTSGD-DWIDVGRGPIKVTAIRNPAELPWA--GVDMAMECTGI 99          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11
Identity = 41/101 (40.59%), Postives = 60/101 (59.41%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            + +AINGFGRIGR  LR    RK+  +DVV +ND    V+ A+++ KYDS  G +K +V   D   L ++GK + V   + P   P  +LG+DI +  TG+
Sbjct:    2 VSIAINGFGRIGRLVLRIALERKN--IDVVAINDPFISVDYAAYMFKYDSTHGKYKGEVSH-DGSNLIINGKKVAVFQEKDPATLPWGKLGVDIAVDSTGV 99          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: E4PD_PHOLL (D-erythrose-4-phosphate dehydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=epd PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11
Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRC-WHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGLSGGR 696
            +KVAINGFGRIGR+ LR  +   + + + V+ VN+    E  +HL+KYDS  G F  DV++ +++ L V    I++         P  ELGIDI +  +G+ G R
Sbjct:    3 IKVAINGFGRIGRSILRALYESGRRAEIAVIAVNELADAEGIAHLLKYDSSHGRFAWDVRL-NNDVLQVGDDNIRLFHQSDISMLPWQELGIDIVLDCSGIYGSR 106          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: E4PD_AERS4 (D-erythrose-4-phosphate dehydrogenase OS=Aeromonas salmonicida (strain A449) GN=epd PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.636e-11
Identity = 37/105 (35.24%), Postives = 59/105 (56.19%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRC-WHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGLSGGR 696
            +K+AING+GRIGRN LR  +   +D  + +V +N+    E   HL ++D+  G F+  V++  H  L V   LI + + + P   P   LG+D+ +  TG+ G R
Sbjct:    2 IKIAINGYGRIGRNVLRALYESGRDKNIKIVAINELAAPEAMVHLTRFDTSHGRFRYPVQLAGHSML-VGEDLISLFAEQDPANLPWRALGVDVVLDCTGVFGSR 105          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P1_BACSU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Bacillus subtilis GN=gapA PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 3.317e-11
Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +KV INGFGRIGRN  R      +  ++VV VND       +HL++YDS+ G   A+V  VD   L V+GK I+V + R P      + G++I ++ TG
Sbjct:    3 VKVGINGFGRIGRNVFRA--ALNNPEVEVVAVNDLTDANMLAHLLQYDSVHGKLDAEVS-VDGNNLVVNGKTIEVSAERDPAKLSWGKQGVEIVVESTG 98          

HSP 2 Score: 20.4014 bits (41), Expect = 3.317e-11
Identity = 9/17 (52.94%), Postives = 10/17 (58.82%), Query Frame = 3
Query:  705 AGSAIHAGAKKVITRGP 755
            A   + AGAKKVI   P
Sbjct:  106 AAKHLEAGAKKVIISAP 122          
The following BLAST results are available for this feature:
BLAST of EY736057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
G3PC_LEIME1.168e-1139.00Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
E4PD_PROMH1.183e-1138.10D-erythrose-4-phosphate dehydrogenase OS=Proteus m... [more]
G3P_CANAL1.545e-1142.57Glyceraldehyde-3-phosphate dehydrogenase OS=Candid... [more]
E4PD_ALTMD2.018e-1139.00D-erythrose-4-phosphate dehydrogenase OS=Alteromon... [more]
G3P_ASHGO2.636e-1143.56Glyceraldehyde-3-phosphate dehydrogenase OS=Ashbya... [more]
G3P2_RHOSH2.636e-1142.00Glyceraldehyde-3-phosphate dehydrogenase B OS=Rhod... [more]
G3P1_KLUMA2.636e-1140.59Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
E4PD_PHOLL2.636e-1139.05D-erythrose-4-phosphate dehydrogenase OS=Photorhab... [more]
E4PD_AERS42.636e-1135.24D-erythrose-4-phosphate dehydrogenase OS=Aeromonas... [more]
G3P1_BACSU3.317e-1140.40Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Baci... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-E02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736057 ID=EY736057; Name=EY736057; organism=Citrus sinensis; type=EST; length=920bp
CCGCCGCCCCCGCAACGCGGTAACCTTGCAGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCACGCCGTCGAGAACTTAGTCTCTCAGCTTTAGAAGTTGCA
GCAAATCAGCAACTAAGCCACAGGGCATGGCCAGTCACTCAGCTCTTGCT
CCCTCAAGAATCCCGGCCATCACTAGGATTCCATCCAAGACTACTCACTC
TTTTCCCACTCAATGCTCCACCAAGAGGCTGGATGTGGCTGAATTCGCTG
GCCTTCGAGCAAATGCAGGCGCGACATACGCCACTGGTGCTAGAGATGCA
TCCTTCTTTGATGCTGTGACTGCTCAACTTACTCCTAAGGTTGCAGCAGG
ATCAGTTCCTGTAAAGAAAGAAACCGTGGCCAAATTGAAGGTGGCAATTA
ATGGATTTGGACGTATTGGCAGGAACTTCCTCCGATGCTGGCACGGCAGG
AAAGACTCACCCCTTGATGTTGTTGTTGTCAATGACAGTGGTGGTGTCGA
GAATGCTTCACACCTTGTAAAATATGACTCATTGCTTGGAACTTTTAAAG
CAGACGTGAAAATAGTGGACCACGAGACCCTCTCTGTCGATGGTAAGCTC
ATCAAGGTTGTCTCTAACAGGGGACCTCCCCCCCCCCCTGGGGCTGAGCT
CGGAATTGACATCCCTATTCAGGGAACCGGACTCTCCGGTGGACGGCCCC
TGTGGCGGGAAGCGCGATCCACGCTGGTGCCAAGAAAGTAATTACCCGTG
GGCCCCCCACAGGGGGCGAAAATGTCCACCCATCTGTCGGTGGGGGTCGC
CGACCACGGTCCCCGAGCCCCACGTTCCCCCCATTGCTCCGCACCCCTCC
CCGCCCCACCCGCGGGGCCGCCGCCCCCCGCCACCGTCCCCACCCCCAAA
CTCTGGGTGGTGCTCGGACC
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