EY736057

Overview
NameEY736057
Unique NameEY736057
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_BUCAI (Glyceraldehyde-3-phosphate dehydrogenase OS=Buchnera aphidicola subsp. Acyrthosiphon pisum GN=gapA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.318e-11
Identity = 38/100 (38.00%), Postives = 59/100 (59.00%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            +KV INGFGRIGR   R    +K S ++++ +ND    E  ++++KYDS  G FK  +   D + + ++GK I+V S + P      +L ID+ I+ TGL
Sbjct:    3 IKVGINGFGRIGRVLFRL--AQKRSDIEIIAINDLLAPEYIAYMLKYDSTHGVFKKHITF-DKDNIIINGKNIRVTSIKDPEKLMWHDLSIDVVIESTGL 99          

HSP 2 Score: 20.4014 bits (41), Expect = 3.318e-11
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  717 IHAGAKKVITRGP 755
            I AG+KKV+  GP
Sbjct:  110 ILAGSKKVVVTGP 122          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P1_KLULA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces lactis GN=GAP1 PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 45/101 (44.55%), Postives = 60/101 (59.41%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            +KVAINGFGRIGR  LR    RK   L+VV VND    V+ A+++ KYDS  G +K +V    ++ L +DG  I V   + P   P  +LG+DI I  TG+
Sbjct:    2 VKVAINGFGRIGRLVLRIALQRK--ALEVVAVNDPFISVDYAAYMFKYDSTHGRYKGEVTTSGND-LVIDGHKIAVFQEKDPANLPWGKLGVDIVIDSTGV 99          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: E4PD_YERPS (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pseudotuberculosis GN=epd PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWH--GRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGLSGGR 696
            +++AINGFGRIGR+ LR  +  GR+ + + VV +N+    E  +HL+KYDS  G F  DV+  + ++L V   +I+++        P +ELGID+ +  +G+ G R
Sbjct:    3 IRIAINGFGRIGRSVLRALYESGRR-AEISVVAINELASAEGMAHLLKYDSSHGRFAWDVR-QECDSLYVGDDIIRLIHQSEIEQLPWSELGIDVVLDCSGVYGSR 106          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: E4PD_YERPN (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=epd PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWH--GRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGLSGGR 696
            +++AINGFGRIGR+ LR  +  GR+ + + VV +N+    E  +HL+KYDS  G F  DV+  + ++L V   +I+++        P +ELGID+ +  +G+ G R
Sbjct:    3 IRIAINGFGRIGRSVLRALYESGRR-AEISVVAINELASAEGMAHLLKYDSSHGRFAWDVR-QECDSLYVGDDIIRLIHQSEIEQLPWSELGIDVVLDCSGVYGSR 106          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: E4PD_YERPE (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pestis GN=epd PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWH--GRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGLSGGR 696
            +++AINGFGRIGR+ LR  +  GR+ + + VV +N+    E  +HL+KYDS  G F  DV+  + ++L V   +I+++        P +ELGID+ +  +G+ G R
Sbjct:    3 IRIAINGFGRIGRSVLRALYESGRR-AEISVVAINELASAEGMAHLLKYDSSHGRFAWDVR-QECDSLYVGDDIIRLIHQSEIEQLPWSELGIDVVLDCSGVYGSR 106          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: E4PD_YERPA (D-erythrose-4-phosphate dehydrogenase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=epd PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.442e-11
Identity = 40/106 (37.74%), Postives = 65/106 (61.32%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWH--GRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGLSGGR 696
            +++AINGFGRIGR+ LR  +  GR+ + + VV +N+    E  +HL+KYDS  G F  DV+  + ++L V   +I+++        P +ELGID+ +  +G+ G R
Sbjct:    3 IRIAINGFGRIGRSVLRALYESGRR-AEISVVAINELASAEGMAHLLKYDSSHGRFAWDVR-QECDSLYVGDDIIRLIHQSEIEQLPWSELGIDVVLDCSGVYGSR 106          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_COCIM (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides immitis GN=GPD PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.496e-11
Identity = 43/101 (42.57%), Postives = 58/101 (57.43%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGL 684
            +KV INGFGRIGR   R  +  +   +++V VND       A++++KYDS  G FK DVK  D+  L VDGK ++    R P   P AE G D  I+ TG+
Sbjct:    3 VKVGINGFGRIGRIVFR--NAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFKGDVKFSDNG-LDVDGKHVRFYQERDPANIPWAETGADYVIESTGV 100          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P_YARLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrowia lipolytica GN=GPD PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 44/105 (41.90%), Postives = 60/105 (57.14%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSG-GVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGLSGGR 696
            +KV INGFGRIGR  LR  +  K+  ++VV VND     E A+++ KYDS  G FK  V+  D   L +DGK I+V   R P   P  + G D  ++ TG+  G+
Sbjct:    3 IKVGINGFGRIGRIVLR--NALKNPEVEVVAVNDPFIDTEYAAYMFKYDSTHGRFKGKVEAKDGG-LIIDGKHIQVFGERDPSNIPWGKAGADYVVESTGVFTGK 104          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: E4PD_PSEA6 (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=epd PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 37/105 (35.24%), Postives = 63/105 (60.00%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRC-WHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGLSGGR 696
            ++VAINGFGR+GRN LR  +   ++  + +V +N+    E  +HL+KYD+  G F+  V ++D++ L V G  I ++        P A+L ID+ ++ TG++  R
Sbjct:    2 IRVAINGFGRVGRNVLRALYETGQNKQIQIVAINELAEPEGVAHLLKYDTAHGRFRFPV-VLDNQQLVVAGDHITLLQQENIRDLPWAQLDIDVVLECTGVNNER 105          
BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: E4PD_ENT38 (D-erythrose-4-phosphate dehydrogenase OS=Enterobacter sp. (strain 638) GN=epd PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.872e-11
Identity = 39/105 (37.14%), Postives = 60/105 (57.14%), Query Frame = 1
Query:  385 LKVAINGFGRIGRNFLRC-WHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTGLSGGR 696
            ++VAINGFGRIGRN +R  +   + + + VV +N+       +HL+KYD+  G F  DV+  + E L V    I+V+  +     P  ELG+D+ +  TG+ G R
Sbjct:    3 VRVAINGFGRIGRNVIRALYESGRRAEITVVAINELADAVGMAHLLKYDTSHGRFAWDVR-QEREQLFVGDDAIRVLHEQSIDALPWRELGVDVVLDCTGVYGNR 106          
The following BLAST results are available for this feature:
BLAST of EY736057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
G3P_BUCAI3.318e-1138.00Glyceraldehyde-3-phosphate dehydrogenase OS=Buchne... [more]
G3P1_KLULA3.442e-1144.55Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluy... [more]
E4PD_YERPS3.442e-1137.74D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]
E4PD_YERPN3.442e-1137.74D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]
E4PD_YERPE3.442e-1137.74D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]
E4PD_YERPA3.442e-1137.74D-erythrose-4-phosphate dehydrogenase OS=Yersinia ... [more]
G3P_COCIM4.496e-1142.57Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]
G3P_YARLI5.872e-1141.90Glyceraldehyde-3-phosphate dehydrogenase OS=Yarrow... [more]
E4PD_PSEA65.872e-1135.24D-erythrose-4-phosphate dehydrogenase OS=Pseudoalt... [more]
E4PD_ENT385.872e-1137.14D-erythrose-4-phosphate dehydrogenase OS=Enterobac... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-E02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736057 ID=EY736057; Name=EY736057; organism=Citrus sinensis; type=EST; length=920bp
CCGCCGCCCCCGCAACGCGGTAACCTTGCAGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCACGCCGTCGAGAACTTAGTCTCTCAGCTTTAGAAGTTGCA
GCAAATCAGCAACTAAGCCACAGGGCATGGCCAGTCACTCAGCTCTTGCT
CCCTCAAGAATCCCGGCCATCACTAGGATTCCATCCAAGACTACTCACTC
TTTTCCCACTCAATGCTCCACCAAGAGGCTGGATGTGGCTGAATTCGCTG
GCCTTCGAGCAAATGCAGGCGCGACATACGCCACTGGTGCTAGAGATGCA
TCCTTCTTTGATGCTGTGACTGCTCAACTTACTCCTAAGGTTGCAGCAGG
ATCAGTTCCTGTAAAGAAAGAAACCGTGGCCAAATTGAAGGTGGCAATTA
ATGGATTTGGACGTATTGGCAGGAACTTCCTCCGATGCTGGCACGGCAGG
AAAGACTCACCCCTTGATGTTGTTGTTGTCAATGACAGTGGTGGTGTCGA
GAATGCTTCACACCTTGTAAAATATGACTCATTGCTTGGAACTTTTAAAG
CAGACGTGAAAATAGTGGACCACGAGACCCTCTCTGTCGATGGTAAGCTC
ATCAAGGTTGTCTCTAACAGGGGACCTCCCCCCCCCCCTGGGGCTGAGCT
CGGAATTGACATCCCTATTCAGGGAACCGGACTCTCCGGTGGACGGCCCC
TGTGGCGGGAAGCGCGATCCACGCTGGTGCCAAGAAAGTAATTACCCGTG
GGCCCCCCACAGGGGGCGAAAATGTCCACCCATCTGTCGGTGGGGGTCGC
CGACCACGGTCCCCGAGCCCCACGTTCCCCCCATTGCTCCGCACCCCTCC
CCGCCCCACCCGCGGGGCCGCCGCCCCCCGCCACCGTCCCCACCCCCAAA
CTCTGGGTGGTGCTCGGACC
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