EY736057 | Citrus Genome Database

Overview


Name	EY736057
Unique Name	EY736057
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	920

Libraries


Library Name	Type
Sweet orange fruit, development stadium (6 of 6)	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P2_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MW2) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 7.249e-11
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 1

Query:  391 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +AING GRIGR  LR     K+  L+VV +N S   E  +HL+ YD+  G +   V+ +++  L V    IK+V++R P   P  EL IDI I  TG
Sbjct:    5 IAINGMGRIGRMVLRIALQNKN--LNVVAINASYPPETIAHLINYDTTHGKYNLKVEPIENG-LQVGDHKIKLVADRNPENLPWKELDIDIAIDATG 98

HSP 2 Score: 25.409 bits (54), Expect = 7.249e-11
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3

Query:  717 IHAGAKKVITRGPPTGG 767
            I AGAKKV+  GP  GG
Sbjct:  110 IKAGAKKVLLTGPSKGG 126

BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P2_STAAS (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MSSA476) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 7.249e-11
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 1

Query:  391 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +AING GRIGR  LR     K+  L+VV +N S   E  +HL+ YD+  G +   V+ +++  L V    IK+V++R P   P  EL IDI I  TG
Sbjct:    5 IAINGMGRIGRMVLRIALQNKN--LNVVAINASYPPETIAHLINYDTTHGKYNLKVEPIENG-LQVGDHKIKLVADRNPENLPWKELDIDIAIDATG 98

HSP 2 Score: 25.409 bits (54), Expect = 7.249e-11
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3

Query:  717 IHAGAKKVITRGPPTGG 767
            I AGAKKV+  GP  GG
Sbjct:  110 IKAGAKKVLLTGPSKGG 126

BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P2_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MRSA252) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 7.249e-11
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 1

Query:  391 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +AING GRIGR  LR     K+  L+VV +N S   E  +HL+ YD+  G +   V+ +++  L V    IK+V++R P   P  EL IDI I  TG
Sbjct:    5 IAINGMGRIGRMVLRIALQNKN--LNVVAINASYPPETIAHLINYDTTHGKYNLKVEPIENG-LQVGDHKIKLVADRNPENLPWKELDIDIAIDATG 98

HSP 2 Score: 25.409 bits (54), Expect = 7.249e-11
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3

Query:  717 IHAGAKKVITRGPPTGG 767
            I AGAKKV+  GP  GG
Sbjct:  110 IKAGAKKVLLTGPSKGG 126

BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P2_STAAN (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain N315) GN=gapA2 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 7.249e-11
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 1

Query:  391 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +AING GRIGR  LR     K+  L+VV +N S   E  +HL+ YD+  G +   V+ +++  L V    IK+V++R P   P  EL IDI I  TG
Sbjct:    5 IAINGMGRIGRMVLRIALQNKN--LNVVAINASYPPETIAHLINYDTTHGKYNLKVEPIENG-LQVGDHKIKLVADRNPENLPWKELDIDIAIDATG 98

HSP 2 Score: 25.409 bits (54), Expect = 7.249e-11
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3

Query:  717 IHAGAKKVITRGPPTGG 767
            I AGAKKV+  GP  GG
Sbjct:  110 IKAGAKKVLLTGPSKGG 126

BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P2_STAAM (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=gapA2 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 7.249e-11
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 1

Query:  391 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +AING GRIGR  LR     K+  L+VV +N S   E  +HL+ YD+  G +   V+ +++  L V    IK+V++R P   P  EL IDI I  TG
Sbjct:    5 IAINGMGRIGRMVLRIALQNKN--LNVVAINASYPPETIAHLINYDTTHGKYNLKVEPIENG-LQVGDHKIKLVADRNPENLPWKELDIDIAIDATG 98

HSP 2 Score: 25.409 bits (54), Expect = 7.249e-11
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3

Query:  717 IHAGAKKVITRGPPTGG 767
            I AGAKKV+  GP  GG
Sbjct:  110 IKAGAKKVLLTGPSKGG 126

BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P2_STAAC (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain COL) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 7.249e-11
Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 1

Query:  391 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +AING GRIGR  LR     K+  L+VV +N S   E  +HL+ YD+  G +   V+ +++  L V    IK+V++R P   P  EL IDI I  TG
Sbjct:    5 IAINGMGRIGRMVLRIALQNKN--LNVVAINASYPPETIAHLINYDTTHGKYNLKVEPIENG-LQVGDHKIKLVADRNPENLPWKELDIDIAIDATG 98

HSP 2 Score: 25.409 bits (54), Expect = 7.249e-11
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 3

Query:  717 IHAGAKKVITRGPPTGG 767
            I AGAKKV+  GP  GG
Sbjct:  110 IKAGAKKVLLTGPSKGG 126

BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 7.249e-11
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 1

Query:  391 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +AING GRIGR  LR     K+  L+V  +N S   E  +HL+ YD+  G +   V+ ++   + V+G  IK++S+R P   P  E+ ID+ I+ TG
Sbjct:    5 IAINGMGRIGRMVLRIALNNKN--LNVKAINASYPPETIAHLLNYDTTHGVYDKKVEPIE-SGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATG 98

HSP 2 Score: 26.9498 bits (58), Expect = 7.249e-11
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 3

Query:  717 IHAGAKKVITRGPPTGGE 770
            I+AGAKKV+  GP  GG+
Sbjct:  110 INAGAKKVLLTGPSKGGD 127

BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 7.249e-11
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 1

Query:  391 VAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +AING GRIGR  LR     K+  L+V  +N S   E  +HL+ YD+  G +   V+ ++   + V+G  IK++S+R P   P  E+ ID+ I+ TG
Sbjct:    5 IAINGMGRIGRMVLRIALNNKN--LNVKAINASYPPETIAHLLNYDTTHGVYDKKVEPIE-SGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATG 98

HSP 2 Score: 26.9498 bits (58), Expect = 7.249e-11
Identity = 11/18 (61.11%), Postives = 14/18 (77.78%), Query Frame = 3

Query:  717 IHAGAKKVITRGPPTGGE 770
            I+AGAKKV+  GP  GG+
Sbjct:  110 INAGAKKVLLTGPSKGGD 127

BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P1_STAAW (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus (strain MW2) GN=gapA1 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 7.254e-11
Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 1

Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +KVAINGFGRIGR   R    ++   L+VV VND    +  +HL+KYD++ G F  +V++VD     V+GK +K  S       P  +L ID+ ++ TG
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTG 98

HSP 2 Score: 23.8682 bits (50), Expect = 7.254e-11
Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 3

Query:  705 AGSAIHAGAKKVITRGPPTG 764
            A + I AGAKKV+   P TG
Sbjct:  106 AQAHIEAGAKKVLISAPATG 125

BLAST of EY736057 vs. ExPASy Swiss-Prot
Match: G3P1_STAAU (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Staphylococcus aureus GN=gapA1 PE=3 SV=1)

HSP 1 Score: 64.3142 bits (155), Expect = 7.254e-11
Identity = 40/99 (40.40%), Postives = 58/99 (58.59%), Query Frame = 1

Query:  385 LKVAINGFGRIGRNFLRCWHGRKDSPLDVVVVNDSGGVENASHLVKYDSLLGTFKADVKIVDHETLSVDGKLIKVVSNRGPPPPPGAELGIDIPIQGTG 681
            +KVAINGFGRIGR   R    ++   L+VV VND    +  +HL+KYD++ G F  +V++VD     V+GK +K  S       P  +L ID+ ++ TG
Sbjct:    3 VKVAINGFGRIGRLAFR--RIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVD-GGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTG 98

HSP 2 Score: 23.8682 bits (50), Expect = 7.254e-11
Identity = 11/20 (55.00%), Postives = 13/20 (65.00%), Query Frame = 3

Query:  705 AGSAIHAGAKKVITRGPPTG 764
            A + I AGAKKV+   P TG
Sbjct:  106 AQAHIEAGAKKVLISAPATG 125

The following BLAST results are available for this feature:

BLAST of EY736057 vs. ExPASy Swiss-Prot

BLAST of EY736057 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89


Match Name	E-value	Identity	Description
G3P2_STAAW	7.249e-11	41.24	Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap...	[more]
G3P2_STAAS	7.249e-11	41.24	Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap...	[more]
G3P2_STAAR	7.249e-11	41.24	Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap...	[more]
G3P2_STAAN	7.249e-11	41.24	Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap...	[more]
G3P2_STAAM	7.249e-11	41.24	Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap...	[more]
G3P2_STAAC	7.249e-11	41.24	Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap...	[more]
G3P2_STAES	7.249e-11	38.14	Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap...	[more]
G3P2_STAEQ	7.249e-11	38.14	Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap...	[more]
G3P1_STAAW	7.254e-11	40.40	Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap...	[more]
G3P1_STAAU	7.254e-11	40.40	Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Stap...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS00-C3-705-009-E02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY736057 ID=EY736057; Name=EY736057; organism=Citrus sinensis; type=EST; length=920bp
CCGCCGCCCCCGCAACGCGGTAACCTTGCAGNNNNNNNNNNNNNNNNNNN
NNNNNNNNNCACGCCGTCGAGAACTTAGTCTCTCAGCTTTAGAAGTTGCA
GCAAATCAGCAACTAAGCCACAGGGCATGGCCAGTCACTCAGCTCTTGCT
CCCTCAAGAATCCCGGCCATCACTAGGATTCCATCCAAGACTACTCACTC
TTTTCCCACTCAATGCTCCACCAAGAGGCTGGATGTGGCTGAATTCGCTG
GCCTTCGAGCAAATGCAGGCGCGACATACGCCACTGGTGCTAGAGATGCA
TCCTTCTTTGATGCTGTGACTGCTCAACTTACTCCTAAGGTTGCAGCAGG
ATCAGTTCCTGTAAAGAAAGAAACCGTGGCCAAATTGAAGGTGGCAATTA
ATGGATTTGGACGTATTGGCAGGAACTTCCTCCGATGCTGGCACGGCAGG
AAAGACTCACCCCTTGATGTTGTTGTTGTCAATGACAGTGGTGGTGTCGA
GAATGCTTCACACCTTGTAAAATATGACTCATTGCTTGGAACTTTTAAAG
CAGACGTGAAAATAGTGGACCACGAGACCCTCTCTGTCGATGGTAAGCTC
ATCAAGGTTGTCTCTAACAGGGGACCTCCCCCCCCCCCTGGGGCTGAGCT
CGGAATTGACATCCCTATTCAGGGAACCGGACTCTCCGGTGGACGGCCCC
TGTGGCGGGAAGCGCGATCCACGCTGGTGCCAAGAAAGTAATTACCCGTG
GGCCCCCCACAGGGGGCGAAAATGTCCACCCATCTGTCGGTGGGGGTCGC
CGACCACGGTCCCCGAGCCCCACGTTCCCCCCATTGCTCCGCACCCCTCC
CCGCCCCACCCGCGGGGCCGCCGCCCCCCGCCACCGTCCCCACCCCCAAA
CTCTGGGTGGTGCTCGGACC