EY736056

Overview
NameEY736056
Unique NameEY736056
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12567 contig Csv1_Contig12567:41..908. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.599e-47
Identity = 97/177 (54.80%), Postives = 122/177 (68.93%), Query Frame = 1
Query:  271 DLNTFKFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKN-PNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIV-----KXXXXXXXXXXXXALVSMNHDTQSCMDPNV 783
            D + FKF PI+ES VSR MT RY  D+  +A +D    GAGS+GLS AY ++KN P++++ IIE SV+PGGG+WL GQLFSAMV+RKPAH+FL EL I Y+++  YVV+KHAALF ST++SK+L  PNVKLFNA   EDL+      K             LV+  H TQ CMDPNV
Sbjct:   34 DWSDFKFAPIRESTVSRAMTSRYFKDLDKFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNV 210          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_PYRHO (Putative thiazole biosynthetic enzyme OS=Pyrococcus horikoshii GN=PH1357 PE=3 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.320e-16
Identity = 46/133 (34.59%), Postives = 75/133 (56.39%), Query Frame = 1
Query:  298 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 696
            ++E  ++R +   Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W  G  F+ +VV+  A   LDE GI Y+E +    +  A    +TI SK++ +  VK+FN +  EDL++K
Sbjct:    2 LREVTITRAIVESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQDEAREILDEFGIRYEEFEKGYYVADAIEVATTIASKVV-KSGVKIFNMIEVEDLVIK 132          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_PYRFU (Putative thiazole biosynthetic enzyme OS=Pyrococcus furiosus GN=PF1530 PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.249e-15
Identity = 47/133 (35.34%), Postives = 74/133 (55.64%), Query Frame = 1
Query:  298 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 696
            +K+ ++SR +   Y  D++   + D    GAG +G+   Y L+K    ++AI E+ +S GGG W  G  F+ +VV++ A   LDE  I Y+E +    +  A    +TI SK + +  VK+FN V  EDL+VK
Sbjct:    2 LKDVVISRAIVESYFKDLLNNLELDVAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKIVVQEEAKEILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMVEVEDLVVK 132          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_PYRAB (Putative thiazole biosynthetic enzyme OS=Pyrococcus abyssi GN=PYRAB07910 PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.130e-15
Identity = 47/133 (35.34%), Postives = 74/133 (55.64%), Query Frame = 1
Query:  298 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 696
            ++E  +SR +   Y  D++   + D    GAG +G+  AY L+K    ++AI E+ +S GGG W  G  F+ +VV++ A   LDE  I Y+E +    +  A    +TI SK + +  VK+FN +  EDL+VK
Sbjct:    2 LREVTISRAIIESYYRDLLNNLELDVAIVGAGPSGMVAAYYLAKG-GAKVAIFEKKLSIGGGIWGGGMGFNKVVVQEEAREILDEFDIRYEEFEKGYYVADAIEVATTIASKTV-KAGVKIFNMIEVEDLVVK 132          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_PYRKO (Putative thiazole biosynthetic enzyme OS=Pyrococcus kodakaraensis GN=TK0434 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.380e-14
Identity = 44/133 (33.08%), Postives = 72/133 (54.14%), Query Frame = 1
Query:  298 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 696
            ++E  +SR +   Y  D++     D    GAG +G+   Y L+K    ++AI E+ +S GGG W     F+ +VV++ A   LDE G+DY +  + + +  +    ST+ SK + +   K+FN V  EDL+VK
Sbjct:    1 MREIEISRAIVEAYFNDLLQNLQLDIAIVGAGPSGMVAGYYLAKG-GAKVAIFEKKLSVGGGIWGGAMGFNRVVVQESAREILDEFGVDYSQVGNGLYVLDSIELASTLASKAV-KAGAKIFNMVEVEDLVVK 131          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_THEMA (Putative thiazole biosynthetic enzyme OS=Thermotoga maritima GN=TM_0787 PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 41/133 (30.83%), Postives = 78/133 (58.65%), Query Frame = 1
Query:  298 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 696
            +++ ++SR +  RY   +    + D    GAG +GL+ AYEL+KN   ++A+ E+  +PGGG W  G +F+ +V+ K    FL E+ I+Y+ ++ ++V+  +  F S ++ +   +    +FN V+ ED+ V+
Sbjct:    3 MRDVLISRLIVERYFEKLRNSLELDVAIVGAGPSGLTAAYELAKN-GFRVAVFEERNTPGGGIWGGGMMFNEIVLEKELENFLKEVEIEYEVKEDHIVV-DSVHFASGLLYR-ATKAGAIVFNNVSVEDVAVQ 132          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_METTH (Putative thiazole biosynthetic enzyme OS=Methanobacterium thermoautotrophicum GN=MTH_1620 PE=3 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 5.246e-14
Identity = 43/137 (31.39%), Postives = 76/137 (55.47%), Query Frame = 1
Query:  286 KFDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVK 696
            K D IK   +SR +   YM D++ Y + D    G G +GL+  Y L++   +++A+ E+ +S GGG W  G +F+ +VV+      LDE GI  +  D    +  +   TST+ S+   +  +K+FN ++ ED++++
Sbjct:    2 KLDDIK---ISRAIVEGYMEDLLDYMEMDVAIGGGGPSGLTAGYYLAR-AGLKVALFERKLSIGGGMWGGGMMFNKIVVQDEGREILDEFGIRSEPYDEGYHVADSVEATSTLCSR-ACQAGLKIFNLMSIEDVMIR 133          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 45/165 (27.27%), Postives = 79/165 (47.88%), Query Frame = 1
Query:  289 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGI--DYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKXXXXXXXXXXXXALVSMNHDTQSCMDP 777
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WL G L + + VR PA   LD+LG+  +YDE++  + +  A    S +++        ++ N     D++V+              V       +C+DP
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMIT-AACDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDP 168          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 45/165 (27.27%), Postives = 79/165 (47.88%), Query Frame = 1
Query:  289 FDPIKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGI--DYDEQDSYVVIKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKXXXXXXXXXXXXALVSMNHDTQSCMDP 777
            F    E+ V+R +TR++  + +   +TD    G G +GL  A EL+   ++ + IIE++   GGG WL G L + + VR PA   LD+LG+  +YDE++  + +  A    S +++        ++ N     D++V+              V       +C+DP
Sbjct:    6 FADANEAEVTRAITRQWTDEFLDDTETDVIIVGGGPSGLMAAKELADR-DVDVTIIEKNNYLGGGFWLGGFLMNKLTVRSPAEAVLDDLGVPYEYDEENDGLAVADAPHACSAMIT-AACDAGARIQNMTEFTDIVVRDDHAVAGAVVNWTPVHSLPRELTCVDP 168          
BLAST of EY736056 vs. ExPASy Swiss-Prot
Match: THI4_METAC (Putative thiazole biosynthetic enzyme OS=Methanosarcina acetivorans GN=MA_2851 PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.429e-11
Identity = 41/136 (30.15%), Postives = 71/136 (52.21%), Query Frame = 1
Query:  298 IKESIVSREMTRRYMTDMITYADTDXXXXGAGSAGLSCAYELSKNPNIQIAIIEQSVSPGGGAWLSGQLFSAMVVRKPAHIFLDELGIDYDEQDSYVVIKHAALFTSTIMSKLLA---RPNVKLFNAVAAEDLIVK 696
            + E I++R +   Y    + Y D D    G G A L  A  L++   +++A+ EQ +S GGG W  G +F  +VV++ A   LD+ GI Y E +S   + ++       + KL+A       ++FN V+ ED++++
Sbjct:    3 LDEVIITRAIFDEYSKTFLDYTDIDVALVGGGPANLVAAKYLAE-AGVKVALYEQKLSLGGGMWAGGMMFPRIVVQEEATRILDDFGIRYKEYESGYYVANSV----ESVGKLIAGATSAGAEVFNLVSFEDIMIR 133          
The following BLAST results are available for this feature:
BLAST of EY736056 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
THI4_YEAST3.599e-4754.80Thiazole biosynthetic enzyme, mitochondrial OS=Sac... [more]
THI4_PYRHO7.320e-1634.59Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRFU1.249e-1535.34Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRAB2.130e-1535.34Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_PYRKO1.380e-1433.08Putative thiazole biosynthetic enzyme OS=Pyrococcu... [more]
THI4_THEMA5.246e-1430.83Putative thiazole biosynthetic enzyme OS=Thermotog... [more]
THI4_METTH5.246e-1431.39Putative thiazole biosynthetic enzyme OS=Methanoba... [more]
THI4_HALSA3.182e-1127.27Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_HALS33.182e-1127.27Putative thiazole biosynthetic enzyme OS=Halobacte... [more]
THI4_METAC5.429e-1130.15Putative thiazole biosynthetic enzyme OS=Methanosa... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-D12-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736056 ID=EY736056; Name=EY736056; organism=Citrus sinensis; type=EST; length=872bp
CCACGCGTCCGCGGACGCGTGGGCTGCTGCAAATCAAATTACTTCTCATT
ATCAAACTTCTAANCAGCAGGGGAAGGAGGGGTAAAAAAAAAAAACATGG
CAGCCATGGCTTCTACAGCTTTCGCTCCTTCAGTTTCGTCTACCACCAAT
AAGCTCTTTGACTCATCCTTTCATGGGGCTCCCATGTCACCTTCTCTTCT
ACGTCTTCAACCCATCAAATCTTCTCGTCCCAACAACTTGTCCATTTCTG
CTTCTGCTTCTCCTCCTTATGACTTGAACACTTTCAAGTTTGACCCCATC
AAAGAATCCATTGTTTCTCGTGAAATGACGCGCAGGTACATGACGGACAT
GATCACTTATGCTGACACTGATGTGGTAGTGGTTGGTGCTGGCTCTGCTG
GCCTCTCTTGTGCTTATGAGCTCAGCAAAAACCCCAACATTCAGATTGCT
ATTATCGAACAGTCTGTTAGCCCCGGCGGTGGCGCGTGGCTCAGTGGACA
GCTCTTCTCTGCCATGGTTGTGCGCAAACCAGCCCACATCTTCCTTGACG
AGCTTGGCATCGACTACGATGAGCAAGACAGCTATGTTGTGATCAAGCAT
GCAGCGCTGTTCACCTCCACTATAATGAGCAAGCTCCTGGCCCGCCCCAA
CGTCAAGCTCTTTAATGCAGTGGCAGCCGAGGACTTGATAGTCAAAGGCG
GCAGAGTTGGTGGGTGTGGGTGACCAACTGGGGCGTTGGTGTCAATGAAT
CACGATACACAGTCTTGCATGGATCCCAATGTATGGAGCGAGGGTGGTGG
AGCCTTGTGCATATGGGCTTTGGGCCTGATAAGTGAATCGAATAATCAAG
CGAACCATGGCGGCTACGACAG
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