EY736050

Overview
NameEY736050
Unique NameEY736050
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736050 vs. ExPASy Swiss-Prot
Match: STHA_PHOPR (Soluble pyridine nucleotide transhydrogenase OS=Photobacterium profundum GN=sthA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.937e-16
Identity = 56/205 (27.32%), Postives = 92/205 (44.88%), Query Frame = 1
Query:  220 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAG*LGWEMGSXWARLGSKVTVVEFAADIVPSMDGGNSQAIS 834
            AA+   + GL    IE+  ++GG C + G IPSKAL H+     E   +   +    SS+      ++      V+  TR  +G + +NK + + G   FI    V V   +    +      +IATGS      G+  D  R+  S   L L   P+ +++ GAG +G E  S +  LG KV ++     ++  +D   S ++S
Sbjct:   24 AAMGLTKAGLNVAVIERENSVGGGCTHWGTIPSKALRHAVSRIIEYNQN-PLYCKNNSSLHSTFSQILGHAQDVVNKQTRMRQGFYDRNKCSLIFGEASFIDAHTVRVKNADNSTDLYSADKFVIATGSRPYHPEGVDFDHSRVYDSDSILQLEHDPRHIIIYGAGVIGSEYASIFRGLGVKVDLINTRHRLLEFLDNEISDSLS 227          
BLAST of EY736050 vs. ExPASy Swiss-Prot
Match: STHA_PSEAE (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas aeruginosa GN=sthA PE=1 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16
Identity = 57/208 (27.40%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  220 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE---VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAG*LGWEMGSXWARLGSKVTVVEFAADIVPSMDGGNSQAIS 834
            AA+ A++ G K   ++ R  +GG C ++G IPSKAL HS     E    F ++ +     E      P ++   D+ +S       G + +N++    G   F+    V V T  G    +     +IATGS       I  +  R+  S   L+L+  P++L++ GAG +G E  S ++ LG  V +++    ++  +D   S A+S
Sbjct:   20 AAMNASKYGRKLAVVDSRRVVGGNCTHLGTIPSKALRHSVKQIIE----FNTNPMFRQIGEPRWFSFPDVLKSADRVISKQVASRTGYYARNRIDMFTGTASFVDERTVEVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDTRDQLLSFLDDEISDALS 223          
BLAST of EY736050 vs. ExPASy Swiss-Prot
Match: STHA_PSEAB (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=sthA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16
Identity = 57/208 (27.40%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  220 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE---VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAG*LGWEMGSXWARLGSKVTVVEFAADIVPSMDGGNSQAIS 834
            AA+ A++ G K   ++ R  +GG C ++G IPSKAL HS     E    F ++ +     E      P ++   D+ +S       G + +N++    G   F+    V V T  G    +     +IATGS       I  +  R+  S   L+L+  P++L++ GAG +G E  S ++ LG  V +++    ++  +D   S A+S
Sbjct:   20 AAMNASKYGRKLAVVDSRRVVGGNCTHLGTIPSKALRHSVKQIIE----FNTNPMFRQIGEPRWFSFPDVLKSADRVISKQVASRTGYYARNRIDMFTGTASFVDERTVEVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDTRDQLLSFLDDEISDALS 223          
BLAST of EY736050 vs. ExPASy Swiss-Prot
Match: STHA_PSEA8 (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas aeruginosa (strain LESB58) GN=sthA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16
Identity = 57/208 (27.40%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  220 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE---VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAG*LGWEMGSXWARLGSKVTVVEFAADIVPSMDGGNSQAIS 834
            AA+ A++ G K   ++ R  +GG C ++G IPSKAL HS     E    F ++ +     E      P ++   D+ +S       G + +N++    G   F+    V V T  G    +     +IATGS       I  +  R+  S   L+L+  P++L++ GAG +G E  S ++ LG  V +++    ++  +D   S A+S
Sbjct:   20 AAMNASKYGRKLAVVDSRRVVGGNCTHLGTIPSKALRHSVKQIIE----FNTNPMFRQIGEPRWFSFPDVLKSADRVISKQVASRTGYYARNRIDMFTGTASFVDERTVEVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDTRDQLLSFLDDEISDALS 223          
BLAST of EY736050 vs. ExPASy Swiss-Prot
Match: STHA_PSEA7 (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas aeruginosa (strain PA7) GN=sthA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16
Identity = 57/208 (27.40%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  220 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFSSVE---VDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAG*LGWEMGSXWARLGSKVTVVEFAADIVPSMDGGNSQAIS 834
            AA+ A++ G K   ++ R  +GG C ++G IPSKAL HS     E    F ++ +     E      P ++   D+ +S       G + +N++    G   F+    V V T  G    +     +IATGS       I  +  R+  S   L+L+  P++L++ GAG +G E  S ++ LG  V +++    ++  +D   S A+S
Sbjct:   20 AAMNASKYGRKLAVVDSRRVVGGNCTHLGTIPSKALRHSVKQIIE----FNTNPMFRQIGEPRWFSFPDVLKSADRVISKQVASRTGYYARNRIDMFTGTASFVDERTVEVVTPSGAVERLVADQFVIATGSRPYRPSDINFNHPRVYDSDTILSLSHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDTRDQLLSFLDDEISDALS 223          
BLAST of EY736050 vs. ExPASy Swiss-Prot
Match: GSHR_CANGA (Glutathione reductase OS=Candida glabrata GN=GLR1 PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.530e-16
Identity = 61/186 (32.80%), Postives = 88/186 (47.31%), Query Frame = 1
Query:  229 KAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSF---ASHGVKFS--SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSD---VKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAG*LGWEMGSXWARLGS 762
            +AA  G KT  IE + ALGGTC+NVGC+P K + ++S +     H+     +  V  S  S+  + P    ++D  +  L    E   KK  V  V G+ KF     V V   +    V     I++ATG      + +PG  +       S G   L E PKK+VV+GAG +G E+   +  LGS
Sbjct:   34 RAASYGAKTLLIEGK-ALGGTCVNVGCVPKKVMWYASDLATRLTHAHEYGLAQNVPLSKESITFNWPEFKKKRDAYIHRLNGIYENNLKKEGVEVVFGWAKFNKDGNVEVTKHDNTTEVYSADRILVATGGKPVYPEKVPGFELG----TDSDGFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGS 214          
BLAST of EY736050 vs. ExPASy Swiss-Prot
Match: TRXR1_MOUSE (Thioredoxin reductase 1, cytoplasmic OS=Mus musculus GN=Txnrd1 PE=1 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.305e-16
Identity = 55/175 (31.43%), Postives = 86/175 (49.14%), Query Frame = 1
Query:  256 TCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAG*LGWEMGSXWARLGSKVTVV 777
            T +  R  LGGTC+NVGCIP K L+H + +  +A+    ++G K   +V+ D   M       + +L  G     ++ KV Y   YG+FI P  +     +G   +   +  +IATG   + L GI  D++  +SS    +L   P K +V+GA  +  E     A +G  VTV+
Sbjct:  161 TPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALKDSRNYGWKVEDTVKHDWEKMTESVQSHIGSLNWGYRVALREKKVVYENAYGRFIGPHRIVATNNKGKEKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM 333          
BLAST of EY736050 vs. ExPASy Swiss-Prot
Match: TRXR1_BOVIN (Thioredoxin reductase 1, cytoplasmic OS=Bos taurus GN=TXNRD1 PE=2 SV=3)

HSP 1 Score: 85.8853 bits (211), Expect = 3.305e-16
Identity = 54/175 (30.86%), Postives = 86/175 (49.14%), Query Frame = 1
Query:  256 TCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAMHSFASHGVKFS-SVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAG*LGWEMGSXWARLGSKVTVV 777
            T +  R  LGGTC+NVGCIP K L+H + +  +A+    ++G     +V+ D   M       + +L  G     ++ KVTY   YG+F+ P  +     +G   +   +  +IATG   + L GI  D++  +SS    +L   P K +V+GA  +  E     A +G  VTV+
Sbjct:   47 TPLGTRWGLGGTCVNVGCIPKK-LMHQAALLGQALRDSRNYGWNVEETVKHDWERMTEAVQNHIGSLNWGYRVALREKKVTYENAYGEFVGPHRIKATNNKGKEKIYSAERFLIATGERPRYL-GIPGDKEYCISSDDLFSLPYCPGKTLVVGASYVALECAGFLAGIGLDVTVM 219          
BLAST of EY736050 vs. ExPASy Swiss-Prot
Match: STHA_PSEMY (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas mendocina (strain ymp) GN=sthA PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.637e-16
Identity = 60/209 (28.71%), Postives = 95/209 (45.45%), Query Frame = 1
Query:  220 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSH--MYHEAMHSFASHGVK--FSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAG*LGWEMGSXWARLGSKVTVVEFAADIVPSMDGGNSQAIS 834
            AA+ AA+ G K   ++ R  +GG C ++G IPSKAL HS    M       F   G    FS      P ++   +K ++       G + +N++    G   F     V V  + G    +  K I+IATGS       +     RI  S   L+L   P++L++ GAG +G E  S ++ LG  V +++    ++  +D   S A+S
Sbjct:   20 AAMNAAKAGRKVAVVDNRPLVGGNCTHLGTIPSKALRHSVRQIMQFNTNPMFRQIGEPRWFS-----FPDVLKSAEKVIAKQVTSRTGYYARNRIDTYFGTASFADEQTVEVVCLNGVVEKLVAKQIVIATGSRPYRPADVDFRHPRIYDSDTILSLGHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDNRDQLLSFLDSEISDALS 223          
BLAST of EY736050 vs. ExPASy Swiss-Prot
Match: STHA_PHOLL (Soluble pyridine nucleotide transhydrogenase OS=Photorhabdus luminescens subsp. laumondii GN=sthA PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.362e-16
Identity = 59/209 (28.23%), Postives = 98/209 (46.89%), Query Frame = 1
Query:  220 AAIKAAQLGLKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHE----AMHSFASHGVKFSSVEVDLPAMMAQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKFISPSEVSVDTIEGGNTVVKGKNIIIATGSDVKSLPGITIDEKRIVSSTGALALNEVPKKLVVIGAG*LGWEMGSXWARLGSKVTVVEFAADIVPSMDGGNSQAIS 834
            AA+   + G     IE+   +GG C + G IPSKAL H+     E     ++S  S  ++ S  E+     + + +  ++  TR  +G +++N      G   FI    VSV   +  + ++    IIIATGS     P +     RI +S   L L+  P+ +++ GAG +G E  S +  LG KV ++     ++  +D   S A+S
Sbjct:   20 AAMGLVKQGKSVAVIERYNNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDNSRVLRSSFAEI-----LRRAEMVINQQTRMRQGFYERNGCRMFSGEATFIDDHRVSVRYADDNHDILSADKIIIATGSRPYCPPDVDFTHSRIYNSDSILKLDHEPRHVIIYGAGVIGCEYASIFRGLGVKVDLINTRNHLLAFLDQEMSDALS 223          
The following BLAST results are available for this feature:
BLAST of EY736050 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 215
Match NameE-valueIdentityDescription
STHA_PHOPR1.937e-1627.32Soluble pyridine nucleotide transhydrogenase OS=Ph... [more]
STHA_PSEAE2.530e-1627.40Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_PSEAB2.530e-1627.40Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_PSEA82.530e-1627.40Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_PSEA72.530e-1627.40Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
GSHR_CANGA2.530e-1632.80Glutathione reductase OS=Candida glabrata GN=GLR1 ... [more]
TRXR1_MOUSE3.305e-1631.43Thioredoxin reductase 1, cytoplasmic OS=Mus muscul... [more]
TRXR1_BOVIN3.305e-1630.86Thioredoxin reductase 1, cytoplasmic OS=Bos taurus... [more]
STHA_PSEMY5.637e-1628.71Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_PHOLL7.362e-1628.23Soluble pyridine nucleotide transhydrogenase OS=Ph... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-009-D05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736050 ID=EY736050; Name=EY736050; organism=Citrus sinensis; type=EST; length=875bp
CCACGCGTCCGATTCAATCGATTGATTGGAGAAAAAGTTGATTGAAAAAT
GGCGATGGCAAGTCTTGCAAGAAGAAAGGCGTACGTGCTGTCAAGGAATC
TCTCGAACTCGTCGAATGGTAATGTTTTCAAGTACAGTTTCTCGCTTACA
AGGGGCTTCGCTTCGGCATCTGATGAGAACGACGTCGTCGTCATCGGAGG
TGGACCTGGTGGTTACGTGGCCGCCATCAAGGCCGCCCAGCTTGGTCTCA
AGACCACGTGCATCGAGAAGCGTGGGGCCCTCGGCGGCACGTGCCTTAAC
GTCGGATGCATCCCCTCTAAGGCACTTCTTCATTCTTCCCACATGTACCA
TGAAGCCATGCATTCTTTTGCCAGCCATGGTGTAAAGTTTTCTTCTGTTG
AAGTTGATTTGCCTGCTATGATGGCCCAAAAAGATAAAGCTGTGTCTAAT
CTTACAAGAGGTATTGAAGGTCTATTCAAGAAGAACAAGGTAACCTATGT
GAAAGGATATGGCAAGTTTATCTCCCCATCTGAGGTCTCTGTGGACACCA
TTGAAGGTGGAAACACTGTCGTGAAAGGCAAGAATATCATAATTGCTACT
GGTTCTGACGTTAAGTCTCTACCTGGGATCACCATTGATGAAAAGAGAAT
TGTGTCATCCACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCG
TGGTCATTGGGGCAGGCTAATTGGGCTGGGAGATGGGCTCANTTTGGGCC
AGGCTTGGTTCAAAGGTCACTGTTGTTGAATTTGCAGCTGATATCGTCCC
AAGCATGGATGGGGGAAATTCGCAAGCCATTTCAGCGTTCACTTGAGAAG
CAAAAGATGAAATCATGCTCAAACT
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