EY736012
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY736012 vs. ExPASy Swiss-Prot
Match: CB21_SILPR (Chlorophyll a-b binding protein, chloroplastic (Fragment) OS=Silene pratensis PE=2 SV=2) HSP 1 Score: 294.664 bits (753), Expect = 4.408e-79 Identity = 149/193 (77.20%), Postives = 162/193 (83.94%), Query Frame = 2 Query: 53 MATSTMALSSSFVGKAVNLAPSGNEL-----SNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLY 616 MATST+ S+F G+ + L P NEL NGGR+SMR+T + S WYGPDR KYLGPFS + PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA+NGVKFGEAVWFKAG+QIF EGGLDYLGNP+L+HAQSILAIWACQVVLMGAVEGYR+ GGPLGE D LY Sbjct: 1 MATSTIQ-QSAFAGQTL-LKPQ-NELVRKVGGNGGRVSMRRTIKSAPES--IWYGPDRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAKNGVKFGEAVWFKAGSQIFQEGGLDYLGNPNLVHAQSILAIWACQVVLMGAVEGYRVGGGPLGEGLDQLY 188
BLAST of EY736012 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 2.839e-78 Identity = 128/176 (72.73%), Postives = 137/176 (77.84%), Query Frame = 2 Query: 89 VGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLY 616 + K L P + L +M K +KS S S RVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSA PETFAKNRELEVIH R AM ALGC+FPELL+ G FGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQSILAIW +V+LMGAVEGYRIA GPLGEVTDPLY Sbjct: 20 IAKPSKLNPISSTLIVTAGFTMLKHAAKSKVSSSTC--DRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYRIARGPLGEVTDPLY 193 HSP 2 Score: 67.3958 bits (163), Expect = 2.839e-78 Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 3 Query: 639 LGVADDPEAFAELRVNEIKNGRLAMFSMFGFSGQASVTGKGPVKKLADPLGDLAN 803 LG+A+D EAFAEL+V E+KNGRLAMFSMFGF QA V+ K ++ LAD LG N Sbjct: 200 LGLAEDTEAFAELKVKELKNGRLAMFSMFGFFVQAIVSRKDRLENLADHLGWTVN 254
BLAST of EY736012 vs. ExPASy Swiss-Prot
Match: CB2_CHLMO (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas moewusii PE=2 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 8.220e-78 Identity = 112/147 (76.19%), Postives = 124/147 (84.35%), Query Frame = 2 Query: 179 SSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLY 616 S+G WYGPDR K+LGPFS P+YLTGEFPGDYGWDTAGLSADPETF K RELEVIH RWA+LGALG + PELL+ GVKFGE VWFKAGAQIFSEGGLDYLG+P+LIHAQ+I+A A QVVLMG +EGYR+ GGP GE DPLY Sbjct: 34 SAGIEWYGPDRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPETFKKYRELEVIHARWALLGALGILTPELLSTYAGVKFGEPVWFKAGAQIFSEGGLDYLGSPALIHAQNIVATLAVQVVLMGLIEGYRVNGGPAGEGLDPLY 180 HSP 2 Score: 78.9518 bits (193), Expect = 8.220e-78 Identity = 38/52 (73.08%), Postives = 43/52 (82.69%), Query Frame = 3 Query: 639 LGVADDPEAFAELRVNEIKNGRLAMFSMFGFSGQASVTGKGPVKKLADPLGD 794 LG+ADDP+ FAEL+V EIKNGRLAMFS FGF QA VTGKGP++ LAD L D Sbjct: 188 LGLADDPDTFAELKVKEIKNGRLAMFSCFGFFVQAIVTGKGPIQNLADHLAD 239
BLAST of EY736012 vs. ExPASy Swiss-Prot
Match: CB2_CHLRE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Chlamydomonas reinhardtii GN=cabII-1 PE=3 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 8.221e-78 Identity = 114/158 (72.15%), Postives = 132/158 (83.54%), Query Frame = 2 Query: 155 RKTGSKSV---SSGSPWYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLY 616 +KT +K+ SSG +YGP+R K+LGP+S P+YLTGEFPGDYGWDTAGLSADPETF + RELE+IH RWAMLGALGC PELLA++G KFGEAVWFKAGAQIFSEGGLDYLGNPSL+HAQ+I+A A QV+LMG +EGYR+ GGP GE DPLY Sbjct: 20 KKTAAKAAAPKSSGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDYGWDTAGLSADPETFKRYRELELIHARWAMLGALGCQTPELLAKSGTKFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQNIVATSAVQVILMGLIEGYRVNGGPAGEGLDPLY 177 HSP 2 Score: 75.0998 bits (183), Expect = 8.221e-78 Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 3 Query: 639 LGVADDPEAFAELRVNEIKNGRLAMFSMFGFSGQASVTGKGPVKKLADPLGD 794 LG+ADDP+ FAEL+V EIKNGRLA FSMFGF QA VTGKGPV+ L D L + Sbjct: 185 LGLADDPDTFAELKVKEIKNGRLASFSMFGFFVQAIVTGKGPVQNLDDHLAN 236
BLAST of EY736012 vs. ExPASy Swiss-Prot
Match: CB23_HORVU (Chlorophyll a-b binding protein of LHCII type III, chloroplastic OS=Hordeum vulgare GN=LHBC PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 1.821e-74 Identity = 120/200 (60.00%), Postives = 142/200 (71.00%), Query Frame = 2 Query: 53 MATSTMALSS-SFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSP-WYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAG----------GPLGEVTDPL 613 MA++ MA +S + V K L+ G S + + ++ G+ WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FA+NR LEVIH RWAMLGALGCVFPE+L + GV+F E VWFKAG+QIFSEGGLDYLGNP+L+HAQSILA+ QV+LMG VEG+RI G P G+ DPL Sbjct: 1 MASTIMAAASRAVVAKTPFLSGQGRAASASPLRDIAAATNGRITMGNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFARNRALEVIHGRWAMLGALGCVFPEVLQKWVGVEFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVLLMGLVEGFRINGLDGVGEGNDLYPGGQYFDPL 200 HSP 2 Score: 77.0258 bits (188), Expect = 1.821e-74 Identity = 42/68 (61.76%), Postives = 48/68 (70.59%), Query Frame = 3 Query: 639 LGVADDPEAFAELRVNEIKNGRLAMFSMFGFSGQASVTGKGPVKKLADPLGD-LANTMPGLPHQLGPG 839 LG+ADDP FAEL+V EIKNGRLAMFSMFGF QA VTGKGP++ L D L D +AN + PG Sbjct: 200 LGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLFDHLDDPVANNAWVFATKFAPG 267
BLAST of EY736012 vs. ExPASy Swiss-Prot
Match: CB23_SOLLC (Chlorophyll a-b binding protein 13, chloroplastic OS=Solanum lycopersicum GN=CAB13 PE=1 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 5.268e-74 Identity = 114/186 (61.29%), Postives = 138/186 (74.19%), Query Frame = 2 Query: 56 ATSTMALSSSFVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGP-LGEVTD 607 +++T+ ++ F+G+ N P + ++ G ++ S WYGPDRVKYLGPFS + PSYL GEFPGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGALGC+FPE+L + V F E VWFKAG+QIFS+GGLDYLGNP+L+HAQSILA+ QVVLMG VEG+RI G P +GE D Sbjct: 9 SSTTVVKATPFLGQTKNANPLRDVVAMGS--------ARFTMSNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGALGCIFPEVLEKWVKVDFKEPVWFKAGSQIFSDGGLDYLGNPNLVHAQSILAVLGFQVVLMGLVEGFRINGLPGVGEGND 186 HSP 2 Score: 75.0998 bits (183), Expect = 5.268e-74 Identity = 37/50 (74.00%), Postives = 41/50 (82.00%), Query Frame = 3 Query: 639 LGVADDPEAFAELRVNEIKNGRLAMFSMFGFSGQASVTGKGPVKKLADPL 788 LG+ADDP FAEL+V EIKNGRLAMFSMFGF QA VTGKGP++ L D L Sbjct: 197 LGLADDPTTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPLENLLDHL 246
BLAST of EY736012 vs. ExPASy Swiss-Prot
Match: CB2_DUNTE (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella tertiolecta PE=2 SV=1) HSP 1 Score: 200.675 bits (509), Expect = 7.442e-67 Identity = 98/140 (70.00%), Postives = 115/140 (82.14%), Query Frame = 2 Query: 194 WYGPDRVKYLGPFS-GEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLAR-NGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTD 607 +YGPDR K+LGPFS + P YLTGEFPGDYGWDTAGLSADP+TFA+ RE+E+IH RWA+LGALG + PELL++ GV+FGE VWFKAGAQIF++GGL+YLGN SLIHAQSI+A A QVVLMG E YR GG G + D Sbjct: 33 FYGPDRAKFLGPFSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARYREIELIHARWALLGALGILTPELLSQYAGVQFGEPVWFKAGAQIFADGGLNYLGNESLIHAQSIIATLAVQVVLMGLAEAYRANGGSEGFLDD 172 HSP 2 Score: 75.485 bits (184), Expect = 7.442e-67 Identity = 37/52 (71.15%), Postives = 41/52 (78.85%), Query Frame = 3 Query: 639 LGVADDPEAFAELRVNEIKNGRLAMFSMFGFSGQASVTGKGPVKKLADPLGD 794 LG+ADDP+ FAEL+V EIKNGRLAMFS GF QA VTGKGPV+ L D L D Sbjct: 185 LGLADDPDTFAELKVKEIKNGRLAMFSCLGFFVQAIVTGKGPVQNLTDHLAD 236
BLAST of EY736012 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 193.356 bits (490), Expect = 9.632e-64 Identity = 101/155 (65.16%), Postives = 116/155 (74.84%), Query Frame = 2 Query: 158 KTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLA-RNGVKFGEA-VWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLY 616 K SKS SS + +YGPD + P TGEFPGDYGWDTAGLSADPETF + RELE+IH R +LGALG V PELLA +G+KFG+A +WFKAGA IF +GGL+YLGNPSLIHAQ+I+A A QVVLMG VEGYR+ GGP GE DPLY Sbjct: 45 KAVSKSSSSANQFYGPDATSGWD-LQHQHPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNGGPAGEGLDPLY 198 HSP 2 Score: 72.4034 bits (176), Expect = 9.632e-64 Identity = 35/54 (64.81%), Postives = 42/54 (77.78%), Query Frame = 3 Query: 639 LGVADDPEAFAELRVNEIKNGRLAMFSMFGFSGQASVTGKGPVKKLADPLGDLA 800 LG+ADDP+ FAEL+V EIKNGRLAMF+ GF QA VTGKGP++ L D L + A Sbjct: 206 LGLADDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPIENLTDHLANPA 259
BLAST of EY736012 vs. ExPASy Swiss-Prot
Match: CB22_PINSY (Chlorophyll a-b binding protein type 2 member 2 (Fragment) OS=Pinus sylvestris PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 1.099e-49 Identity = 65/74 (87.84%), Postives = 69/74 (93.24%), Query Frame = 2 Query: 395 ELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGGPLGEVTDPLY 616 ELL +NGVKFGEAVWFKAGAQIFSEGGLDYLGNP+LIHAQSILAIWACQVVLMG +EGYR+ GGPLGE DPLY Sbjct: 1 ELLVKNGVKFGEAVWFKAGAQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRVGGGPLGEGLDPLY 74 HSP 2 Score: 78.1814 bits (191), Expect = 1.099e-49 Identity = 39/52 (75.00%), Postives = 43/52 (82.69%), Query Frame = 3 Query: 639 LGVADDPEAFAELRVNEIKNGRLAMFSMFGFSGQASVTGKGPVKKLADPLGD 794 LG+ADDPEA AEL+V EIKNGRLAMFSMFGF QA VTGKGP++ L D L D Sbjct: 82 LGLADDPEAKAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPIENLYDHLAD 133
BLAST of EY736012 vs. ExPASy Swiss-Prot
Match: CB26_ARATH (Chlorophyll a-b binding protein CP26, chloroplastic OS=Arabidopsis thaliana GN=LHCB5 PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 5.817e-38 Identity = 75/170 (44.12%), Postives = 88/170 (51.76%), Query Frame = 2 Query: 167 SKSVSSGSP----WYGPDRVKYLGPF---SGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFG-EAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAVEGYRIAGG--------------PLGEVTDP 610 SK+VS S WYGPDR +L E P YL GE GDYG+D GL PE FAK + E+IH RWAMLGA G + PE L + G G EAVWFK GA + L+Y G I +LA+ A +VVL+G E YRI G PLG DP Sbjct: 49 SKAVSETSDELAKWYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWAMLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-EVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDP 215 HSP 2 Score: 65.0846 bits (157), Expect = 5.817e-38 Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 3 Query: 639 LGVADDPEAFAELRVNEIKNGRLAMFSMFGFSGQASVTGKGPVKKLADPLGD 794 LG+A DPE A L+V EIKNGRLAMF+M GF QA VTG+GPV+ LA L D Sbjct: 209 LGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFIQAYVTGEGPVENLAKHLSD 260 The following BLAST results are available for this feature:
BLAST of EY736012 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >EY736012 ID=EY736012; Name=EY736012; organism=Citrus sinensis; type=EST; length=840bpback to top |