EY736011

Overview
NameEY736011
Unique NameEY736011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length802
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY736011 vs. ExPASy Swiss-Prot
Match: ECX2_THEON (Probable exosome complex exonuclease 2 OS=Thermococcus onnurineus (strain NA1) GN=TON_0031 PE=3 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.680e-14
Identity = 41/123 (33.33%), Postives = 69/123 (56.10%), Query Frame = 3
Query:  186 LAESIRPDARPLSRARDTTISMGAVASADGSALAKIGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGMINLKELSLVGGKAAWMVYXDIY 554
            L E  R D R L   RD  I +  +  A+GSA  K+G+T +L  IK+++  P  + P++G ++ +  + P+ SP   PG P E A  +A+ +   I  SG + L++L +V GK   +V+ D++
Sbjct:   19 LKEGKRVDGRSLEDYRDLEIKINVIEKAEGSAWVKLGNTQVLVGIKVDMGEPFPDLPEKGVITTNVELVPLASPSFEPGPPDERAIELARVVDRGIRESGAVELEKLVIVPGKLVRVVFIDVH 141          
BLAST of EY736011 vs. ExPASy Swiss-Prot
Match: ECX2_THEGJ (Probable exosome complex exonuclease 2 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=TGAM_2035 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14
Identity = 49/165 (29.70%), Postives = 77/165 (46.67%), Query Frame = 3
Query:  186 LAESIRPDARPLSRARDTTISMGAVASADGSALAKIGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGMINLKELSLVGGKAAWMVYXDIYCXXXXXXXXXXXXXXXXXXXXYLQIPTVSLDD--GQIIMLPE 674
            L E  R D R     RD  I  G +  A+GSA  ++G T +L  IK++V  P  + PD G ++ +  + P+ SP   PG P E A  +A+ +   I  S  + L++L +V GK   +V+ D++                       +IP V  ++  G+II L E
Sbjct:   19 LKEGKRIDGRSFEEYRDIEIKTGFIEKAEGSAWVRLGGTRVLVGIKVDVGEPFPDLPDRGVMTTNVELVPLASPTFEPGPPDERAIELARVIDRGIRESQAVELEKLVIVPGKLVRVVFIDVHVLDHDGNLFDATGLAAMAALMTTKIPKVEYNEETGEIIKLDE 183          
BLAST of EY736011 vs. ExPASy Swiss-Prot
Match: ECX2_SULSO (Probable exosome complex exonuclease 2 OS=Sulfolobus solfataricus GN=SSO0732 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 7.798e-14
Identity = 39/121 (32.23%), Postives = 70/121 (57.85%), Query Frame = 3
Query:  192 ESIRPDARPLSRARDTTISMGAVASADGSALAKIGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGMINLKELSLVGGKAAWMVYXDIY 554
            + IR D R L+  R  +I++     ADGSAL K+G+T +LA  K+E+  P  ++P++G + ++  + P+      PG P E A  +A+ +  ++  S  ++L +L +  GK+ W V+ D+Y
Sbjct:   25 KGIRQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVY 145          
BLAST of EY736011 vs. ExPASy Swiss-Prot
Match: ECX2_SULTO (Probable exosome complex exonuclease 2 OS=Sulfolobus tokodaii GN=ST0442 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 41/165 (24.85%), Postives = 79/165 (47.88%), Query Frame = 3
Query:  186 LAESIRPDARPLSRARDTTISMGAVASADGSALAKIGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGMINLKELSLVGGKAAWMVYXDIYCXXXXXXXXXXXXXXXXXXXXYLQIPTVSLDDGQIIMLPEEQ 680
            L   IR D R  S  R  ++++     A+GSAL K+G T +LA +K+E   P  ++P++G + ++  + P+      PG P E A  +A+ +  ++  S  ++L +L ++ GK  W  + D+Y                       ++P V ++   + ++ EE+
Sbjct:   23 LERGIRLDGRKNSDYRPISVTLNYAKKAEGSALVKLGDTMVLAGVKLEEEEPFPDTPNQGNLVVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKAVDLSKLVIIPGKKVWTAWVDVYVLDYGGNVLDACTLAAVAALYNTKLPKVEIEGDNVKIIKEEK 187          
BLAST of EY736011 vs. ExPASy Swiss-Prot
Match: ECX2_SULIN (Probable exosome complex exonuclease 2 OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=YN1551_1441 PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.269e-13
Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  201 RPDARPLSRARDTTISMGAVASADGSALAKIGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGMINLKELSLVGGKAAWMVYXDIY 554
            R D R L+  R  +I++     ADGSAL K+G+T +LA  K+E+  P  ++P++G + ++  + P+      PG P E A  +A+ +  ++  S  ++L +L +  GK+ W V+ D+Y
Sbjct:   28 RQDGRKLTDYRPLSITLNYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVY 145          
BLAST of EY736011 vs. ExPASy Swiss-Prot
Match: ECX2_SULIY (Probable exosome complex exonuclease 2 OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=YG5714_1402 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  201 RPDARPLSRARDTTISMGAVASADGSALAKIGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGMINLKELSLVGGKAAWMVYXDIY 554
            R D R L+  R  +I++     ADGSAL K+G+T +LA  K+E+  P  ++P++G + ++  + P+      PG P E A  +A+ +  ++  S  ++L +L +  GK+ W V+ D+Y
Sbjct:   28 RQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVY 145          
BLAST of EY736011 vs. ExPASy Swiss-Prot
Match: ECX2_SULIM (Probable exosome complex exonuclease 2 OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=M1425_1407 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  201 RPDARPLSRARDTTISMGAVASADGSALAKIGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGMINLKELSLVGGKAAWMVYXDIY 554
            R D R L+  R  +I++     ADGSAL K+G+T +LA  K+E+  P  ++P++G + ++  + P+      PG P E A  +A+ +  ++  S  ++L +L +  GK+ W V+ D+Y
Sbjct:   28 RQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVY 145          
BLAST of EY736011 vs. ExPASy Swiss-Prot
Match: ECX2_SULIL (Probable exosome complex exonuclease 2 OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=LS215_1502 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  201 RPDARPLSRARDTTISMGAVASADGSALAKIGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGMINLKELSLVGGKAAWMVYXDIY 554
            R D R L+  R  +I++     ADGSAL K+G+T +LA  K+E+  P  ++P++G + ++  + P+      PG P E A  +A+ +  ++  S  ++L +L +  GK+ W V+ D+Y
Sbjct:   28 RQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVY 145          
BLAST of EY736011 vs. ExPASy Swiss-Prot
Match: ECX2_SULIK (Probable exosome complex exonuclease 2 OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=M164_1401 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  201 RPDARPLSRARDTTISMGAVASADGSALAKIGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGMINLKELSLVGGKAAWMVYXDIY 554
            R D R L+  R  +I++     ADGSAL K+G+T +LA  K+E+  P  ++P++G + ++  + P+      PG P E A  +A+ +  ++  S  ++L +L +  GK+ W V+ D+Y
Sbjct:   28 RQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVY 145          
BLAST of EY736011 vs. ExPASy Swiss-Prot
Match: ECX2_SULIA (Probable exosome complex exonuclease 2 OS=Sulfolobus islandicus (strain M.16.27) GN=M1627_1457 PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.963e-13
Identity = 38/118 (32.20%), Postives = 68/118 (57.63%), Query Frame = 3
Query:  201 RPDARPLSRARDTTISMGAVASADGSALAKIGSTTMLAAIKMEVMTPSLESPDEGCVSIDFHMPPICSPLVRPGRPAEAAPVVAKQLSDTISSSGMINLKELSLVGGKAAWMVYXDIY 554
            R D R L+  R  +I++     ADGSAL K+G+T +LA  K+E+  P  ++P++G + ++  + P+      PG P E A  +A+ +  ++  S  ++L +L +  GK+ W V+ D+Y
Sbjct:   28 RQDGRKLTDYRPLSITLDYAKKADGSALVKLGTTMVLAGTKLEIDKPYEDTPNQGNLIVNVELLPLAYETFEPGPPDENAIELARVVDRSLRDSKALDLTKLVIEPGKSVWTVWLDVY 145          
The following BLAST results are available for this feature:
BLAST of EY736011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
ECX2_THEON2.680e-1433.33Probable exosome complex exonuclease 2 OS=Thermoco... [more]
ECX2_THEGJ7.798e-1429.70Probable exosome complex exonuclease 2 OS=Thermoco... [more]
ECX2_SULSO7.798e-1432.23Probable exosome complex exonuclease 2 OS=Sulfolob... [more]
ECX2_SULTO2.269e-1324.85Probable exosome complex exonuclease 2 OS=Sulfolob... [more]
ECX2_SULIN2.269e-1332.20Probable exosome complex exonuclease 2 OS=Sulfolob... [more]
ECX2_SULIY2.963e-1332.20Probable exosome complex exonuclease 2 OS=Sulfolob... [more]
ECX2_SULIM2.963e-1332.20Probable exosome complex exonuclease 2 OS=Sulfolob... [more]
ECX2_SULIL2.963e-1332.20Probable exosome complex exonuclease 2 OS=Sulfolob... [more]
ECX2_SULIK2.963e-1332.20Probable exosome complex exonuclease 2 OS=Sulfolob... [more]
ECX2_SULIA2.963e-1332.20Probable exosome complex exonuclease 2 OS=Sulfolob... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-H08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY736011 ID=EY736011; Name=EY736011; organism=Citrus sinensis; type=EST; length=802bp
CACGCGTCCGGCGACTTCTCTGACGCTCATACACTCTCTGCACAGTTAAA
GCTCCGACTCTTAGCTGCTGAAAAATAATTAAGTAAAAGAAAATGGGGTT
ACCAAATGCCTCAGAGGACTTGTCATCTGAGATGGAAGTAGACGCATTCC
GGCGCCTTTTCCCTCTCCGTTACTTCGAGCGTCATCTTGCAGAATCCATT
CGGCCCGATGCCAGGCCACTTTCTAGAGCTAGAGATACGACAATATCCAT
GGGTGCTGTTGCTTCCGCTGACGGGTCAGCGCTGGCAAAGATTGGTTCCA
CTACAATGTTGGCTGCTATTAAAATGGAAGTTATGACTCCTTCACTGGAG
TCGCCAGACGAGGGCTGCGTATCTATTGATTTCCACATGCCTCCAATTTG
TTCTCCACTTGTTAGGCCTGGTAGGCCAGCTGAGGCTGCACCAGTTGTAG
CGAAGCAGTTATCTGACACTATTTCAAGTTCTGGCATGATTAATTTGAAG
GAACTATCCTTGGTCGGTGGAAAAGCTGCCTGGATGGTGTATNTGGACAT
TTACTGCCTGGATGCTGATGGTGCTCTTTTTGATGCTGCATTACTTTCAG
CAGTTGCTGCTGTCTCCTATTTGCAGATCCCCACAGTATCCTTGGATGAT
GGACAAATAATTATGCTGCCTGAGGAACAGAAGGGAAAAAATTCCGAAAA
AGAACGCGTCAATTACGAAAAAACGGCAGCCCCCCCTGTGTGGTTCTCGA
TGCTCATTGAAATGGCTACCGCCGGAGAACTGACAGCCGAGCGGATCCCC
TT
back to top