EY735992

Overview
NameEY735992
Unique NameEY735992
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735992 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBK (Elongation factor Tu OS=Clostridium botulinum (strain Okra / Type B1) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 80/251 (31.87%), Postives = 123/251 (49.00%), Query Frame = 3
Query:   75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYRG-STLLDALDN-INEPKRPQTGP-SSATQEVYKMGCIGTV 815
            + K H+NI  IGHVD GK+T T  +   L           +K  A   K        +DK   E+ERGITI+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV+ ++   NK D    +       E+V+ EV   L + G+  +  P V  S  E   ++E   N +  +    L++A+D+ I  P+R    P     ++V+ +   GTV
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTV 229          
BLAST of EY735992 vs. ExPASy Swiss-Prot
Match: EFTU_CLOBH (Elongation factor Tu OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 80/251 (31.87%), Postives = 123/251 (49.00%), Query Frame = 3
Query:   75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYRG-STLLDALDN-INEPKRPQTGP-SSATQEVYKMGCIGTV 815
            + K H+NI  IGHVD GK+T T  +   L           +K  A   K        +DK   E+ERGITI+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV+ ++   NK D    +       E+V+ EV   L + G+  +  P V  S  E   ++E   N +  +    L++A+D+ I  P+R    P     ++V+ +   GTV
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTV 229          
BLAST of EY735992 vs. ExPASy Swiss-Prot
Match: EFTU_CLOB1 (Elongation factor Tu OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 80/251 (31.87%), Postives = 123/251 (49.00%), Query Frame = 3
Query:   75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYRG-STLLDALDN-INEPKRPQTGP-SSATQEVYKMGCIGTV 815
            + K H+NI  IGHVD GK+T T  +   L           +K  A   K        +DK   E+ERGITI+ +  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV+ ++   NK D    +       E+V+ EV   L + G+  +  P V  S  E   ++E   N +  +    L++A+D+ I  P+R    P     ++V+ +   GTV
Sbjct:    8 RSKPHVNIGTIGHVDHGKTTLTAAITTVLA----------QKGGASATKYD-----EIDKAPEEKERGITINTSHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVQYIVVFLNKAD----QVDDPELIELVEMEVRELLNEYGFPGDDTPIVVGSALE---VLENQDNAEKTKCIDELMEAIDSYIPTPERATDQPFLMPVEDVFTITGRGTV 229          
BLAST of EY735992 vs. ExPASy Swiss-Prot
Match: EFTU_CLOAB (Elongation factor Tu OS=Clostridium acetobutylicum GN=tuf PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 66/189 (34.92%), Postives = 94/189 (49.74%), Query Frame = 3
Query:   75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFV 641
            + K H+NI  IGHVD GK+T T  +   L              A E   ++F Y  + DK   E+ERGITI+ A  ++ET   +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV+ ++   NK D           D +  EV   L + G+  +  P V
Sbjct:    8 RTKPHVNIGTIGHVDHGKTTLTAAITTIL--------------AKEGKAKAFNYEEI-DKAPEEKERGITINTAHVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLASRVGVEYIVVFLNKADQVD---DPELIDLVEMEVRELLNEYGFPGDDTPIV 171          
BLAST of EY735992 vs. ExPASy Swiss-Prot
Match: EFTU_BORRA (Elongation factor Tu OS=Borrelia recurrentis (strain A1) GN=tuf PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 76/249 (30.52%), Postives = 124/249 (49.80%), Query Frame = 3
Query:   75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYRGSTLLDALDN-INEPKRPQTGP-SSATQEVYKMGCIGTV 815
            + K H+N+  IGHVD GK+T T  +      ++K             + ++ KY  + D    E+ RGITI+    ++ET   +   +D PGH D+IKNMITG +Q D A+L++ + +G        + QT+EH LLA  +G+K++I   NK+D   P+      + +  EV   ++K G+ P   P V  S F   +  +        +   LL+ +DN  + P+R    P   A ++V+ +   GTV
Sbjct:    8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKVNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGF-PSDTPIVKGSAFGAMSNPDDPEATKCIK--ELLETMDNYFDLPERDIDKPFLLAIEDVFSISGRGTV 228          
BLAST of EY735992 vs. ExPASy Swiss-Prot
Match: EFTU_BORGA (Elongation factor Tu OS=Borrelia garinii GN=tuf PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 75/249 (30.12%), Postives = 126/249 (50.60%), Query Frame = 3
Query:   75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYRGSTLLDALDN-INEPKRPQTGP-SSATQEVYKMGCIGTV 815
            + K H+N+  IGHVD GK+T T  +      ++K             + ++ KY  + D    E+ RGITI+    ++ET   +   +D PGH D+IKNMITG +Q D A+L++ + +G        + QT+EH LLA  +G+K++I   NK+D   P+      + +  EV   ++K G++    P +  S F   +  E   +    +   LL+++DN  + P+R    P   A ++V+ +   GTV
Sbjct:    8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKLNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGFS-ANTPIIKGSAFGAMSNPEDPESTKCVK--ELLESMDNYFDLPERDIDKPFLLAVEDVFSISGRGTV 228          
BLAST of EY735992 vs. ExPASy Swiss-Prot
Match: EFTU_BORDL (Elongation factor Tu OS=Borrelia duttonii (strain Ly) GN=tuf PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 76/249 (30.52%), Postives = 124/249 (49.80%), Query Frame = 3
Query:   75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYRGSTLLDALDN-INEPKRPQTGP-SSATQEVYKMGCIGTV 815
            + K H+N+  IGHVD GK+T T  +      ++K             + ++ KY  + D    E+ RGITI+    ++ET   +   +D PGH D+IKNMITG +Q D A+L++ + +G        + QT+EH LLA  +G+K++I   NK+D   P+      + +  EV   ++K G+ P   P V  S F   +  +        +   LL+ +DN  + P+R    P   A ++V+ +   GTV
Sbjct:    8 RTKPHMNVGTIGHVDHGKTTLTAAISIYCSKVNK-------------DAKALKYEDI-DNAPEEKARGITINARHIEYETANRHYAHVDCPGHADYIKNMITGAAQMDAAILLVAADSGA-------EPQTKEHLLLAQRMGIKKIIVFLNKLDLADPEL----VELVEVEVLELVEKYGF-PSDTPIVKGSAFGAMSNPDDPEATKCIK--ELLETMDNYFDLPERDIDKPFLLAIEDVFSISGRGTV 228          
BLAST of EY735992 vs. ExPASy Swiss-Prot
Match: EFTU_ACIBL (Elongation factor Tu OS=Acidobacteria bacterium (strain Ellin345) GN=tuf1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 80/250 (32.00%), Postives = 118/250 (47.20%), Query Frame = 3
Query:   75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDW-YRGSTLLDALD-NINEPKRPQTGP-SSATQEVYKMGCIGTV 815
            + K H+N+  IGH+D GK+T T  +   L            K   ++  RSF     +D    ERERGITI  A  ++ET   +   +D PGH D+IKNMITG +Q D A+L++ +T G          QT+EH LLA  +GV  ++   NK DA          D +  EV   L K G+  + +P V      G  +   +    W  +   L++A+D NI  P R    P     ++++ +   GTV
Sbjct:    8 RSKPHVNVGTIGHIDHGKTTLTAAITKVLS-----------KHNPKIAFRSFDS---IDNAPEERERGITIATAHVEYETANRHYAHVDCPGHADYIKNMITGAAQMDGAILVVAATDGPMP-------QTKEHVLLARQVGVPYVVVFLNKCDAVE---DAELIDLVEMEVRELLNKYGFPGDDLPVV-----RGSALGALNGEAQWEAKIDELMEAVDKNIPLPARDIDKPFLMPIEDIFSISGRGTV 228          
BLAST of EY735992 vs. ExPASy Swiss-Prot
Match: EFTU2_STRAW (Elongation factor Tu 2 OS=Streptomyces avermitilis GN=tuf2 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 77/235 (32.77%), Postives = 111/235 (47.23%), Query Frame = 3
Query:   75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPEKVPFVPISG---FEGDNMIERSTNLDWYRGSTLLDALDN-INEPKRPQTGP 767
            + K H+NI  +GHVD GK+T T  +                K  AE    +F     +D+   E  RGITI+IA  ++ET   +   +D PGH D++KNM+TG +Q D A+L++ +  G          QT EH LLA  +GV  ++   NK DA   + +    D +  EV   L   GY  + VP V +SG    EGD     + +        LLDA+D  +  P+R    P
Sbjct:    8 RTKPHLNIGTMGHVDHGKTTLTAAIT---------------KVLAERGSGTFVPFDRIDRAPEEAARGITINIAHVEYETDTRHYAHVDMPGHADYVKNMVTGAAQLDGAILVVSALDGIMP-------QTAEHVLLARQVGVDHIVVALNKADAGDEELT----DLVELEVRELLTAHGYGGDSVPVVRVSGLKALEGDPRWTAAID-------ALLDAVDTYVPMPERYVDAP 209          
BLAST of EY735992 vs. ExPASy Swiss-Prot
Match: EFTU1_BARQU (Elongation factor Tu 1 OS=Bartonella quintana GN=tuf1 PE=3 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.012e-21
Identity = 80/250 (32.00%), Postives = 117/250 (46.80%), Query Frame = 3
Query:   75 KEKTHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVK-EVSSYLKKVGYNPEKVPFVPISGFEGDNMIERSTNLDWYRGSTLLDALDN-INEPKRPQTGP-SSATQEVYKMGCIGTV 815
            + K H+NI  IGHVD GK++ T  +    G                     FK    +D    ER RGITI  A  ++ET K +   +D PGH D++KNMITG +Q D A+L++ +  G          QTREH LLA  +GV  ++   NK+D    +   A   E+V+ E+   L K  +  + +P V  S        ++S   D  R   L+  +DN I  P+RP   P     ++V+ +   GTV
Sbjct:    8 RTKPHVNIGTIGHVDHGKTSLTAAITKYFG--------------------EFKAYDQIDAAPEERARGITISTAHVEYETEKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLARQVGVPAIVVFLNKVD----QVDDAELLELVELEIRELLSKYDFPGDDIPIVKGSALAALEDKDKSIGEDAVR--LLMSEVDNYIPTPERPVDQPFLLPIEDVFSISGRGTV 224          
The following BLAST results are available for this feature:
BLAST of EY735992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFTU_CLOBK2.012e-2131.87Elongation factor Tu OS=Clostridium botulinum (str... [more]
EFTU_CLOBH2.012e-2131.87Elongation factor Tu OS=Clostridium botulinum (str... [more]
EFTU_CLOB12.012e-2131.87Elongation factor Tu OS=Clostridium botulinum (str... [more]
EFTU_CLOAB2.012e-2134.92Elongation factor Tu OS=Clostridium acetobutylicum... [more]
EFTU_BORRA2.012e-2130.52Elongation factor Tu OS=Borrelia recurrentis (stra... [more]
EFTU_BORGA2.012e-2130.12Elongation factor Tu OS=Borrelia garinii GN=tuf PE... [more]
EFTU_BORDL2.012e-2130.52Elongation factor Tu OS=Borrelia duttonii (strain ... [more]
EFTU_ACIBL2.012e-2132.00Elongation factor Tu OS=Acidobacteria bacterium (s... [more]
EFTU2_STRAW2.012e-2132.77Elongation factor Tu 2 OS=Streptomyces avermitilis... [more]
EFTU1_BARQU2.012e-2132.00Elongation factor Tu 1 OS=Bartonella quintana GN=t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-F08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735992 ID=EY735992; Name=EY735992; organism=Citrus sinensis; type=EST; length=880bp
CCACGCGTCCGGAGAGAGAACCATTTTCGCGAATATCATTTTAATAAGGT
TTTTTCTAGATTTGCCTAATGGGTAAGGAGAAGACTCACATCAACATTGT
GGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGACACTTGA
TCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCGAGAGGTTCGAGAAG
GAAGCTGCTGAGATGAACAAGAGGTCATTCAAATACGCCTGGGTGCTCGA
CAAGCTCAAGGCTGAGCGTGAACGTGGTATTACCATTGATATTGCCTTGT
GGAAGTTCGAGACCACCAAGTACTACTGCACCGTCATTGATGCTCCCGGA
CATCGTGACTTTATCAAGAACATGATTACCGGTACCTCACAGGCTGACTG
TGCTGTCCTCATCATTGACTCTACCACTGGTGGTTTTGAAGCTGGTATCT
CCAAGGATGGTCAGACTCGTGAGCATGCTTTGCTTGCTTTCACCCTTGGT
GTGAAGCAGATGATTTGCTGCTGTAACAAGATGGACGCCACCACCCCCAA
GTATTCAAAGGCTAGGTACGATGAAATTGTGAAGGAGGTCTCTTCCTACC
TGAAGAAGGTTGGATACAACCCCGAGAAAGTCCCATTCGTGCCCATCTCT
GGTTTCGAGGGTGACAACATGATTGAGAGGTCTACCAACCTTGACTGGTA
CAGGGGGTCAACCCTGCTGGACGCTCTTGACAATATCAATGAGCCGAAGA
GGCCTCAGACAGGCCCTTCCTCTGCCACTCAGGAAGTGTACAAGATGGGT
TGCATTGGAACCGTCCCATAGGTCGCGTTGAAACGGTGTCCCAAGGCTGG
TATTGTGGTGACATTGGGCCCCGCTGGATG
back to top