EY735944

Overview
NameEY735944
Unique NameEY735944
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length559
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735944 vs. ExPASy Swiss-Prot
Match: KPYK_STAA3 (Pyruvate kinase OS=Staphylococcus aureus (strain USA300) GN=pyk PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 6.169e-23
Identity = 66/173 (38.15%), Postives = 100/173 (57.80%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPKIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERRDVNLPGVMVDLALLSKKDEEDI*RGGIPDHIDIIALCPVLKGPDLVWVRS*FE 520
            SHE H+  ++ +R        + A++LDTKGP+IRT  +KDG  I+L++G E+ +S +  ++G      ++Y+ L  DVQ GS IL  DG I   V + +     VKC   NS  L  ++ VNLPGV V L  +++KD EDI R GI +++D IA   V +  D++ +R   E
Sbjct:   39 SHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGI-IELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGLIELQVKDIDHAKKEVKCDILNSGELKNKKGVNLPGVRVSLPGITEKDAEDI-RFGIKENVDFIAASFVRRPSDVLEIREILE 208          
BLAST of EY735944 vs. ExPASy Swiss-Prot
Match: KPYK_EMENI (Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=3 SV=2)

HSP 1 Score: 107.071 bits (266), Expect = 6.169e-23
Identity = 64/172 (37.21%), Postives = 96/172 (55.81%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA-MVNTGILCAVMLDTKGPKIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERRDVNLPGVMVDLALLSKKDEEDI*RGGIPDHIDIIALCPVLKGPDLVWVR 508
            S+EYHQ  +++ R A     G   A+ LDTKGP+IRTG     K I +K G E+ ISTD  Y    D+  + + YK +   +  G +I   DG +SF VLE  V    ++ RC N+  +  R+ VNLPG  VDL  LS+KD  D+ + G+ + +D++    + +G D+  +R
Sbjct:   70 SYEYHQSVIDHAREAEKQQAGRPVAIALDTKGPEIRTGNTVGDKDIPIKAGHEMNISTDEQYATASDDQNMYVDYKNITKVISAGKLIYVDDGILSFEVLEV-VDDKTLRVRCLNNGNISSRKGVNLPGTDVDLPALSEKDISDL-KFGVKNKVDMVFASFIRRGSDIRHIR 239          
BLAST of EY735944 vs. ExPASy Swiss-Prot
Match: KPYM_PONAB (Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2 PE=2 SV=3)

HSP 1 Score: 104.76 bits (260), Expect = 3.061e-22
Identity = 69/179 (38.55%), Postives = 100/179 (55.87%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLDTKGPKIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERRDVNLPGVMVDLALLSKKDEEDI*RGGIPDHIDIIALCPVLKGPDLVWVR 508
            +HEYH ET+ N+RTA     +  IL    AV LDTKGP+IRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V +    A  +    EN   LG ++ VNLPG  VDL  +S+KD +D+ + G+   +D++    + K  D+  VR
Sbjct:   80 THEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKG--ADFLLTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKASDVHEVR 255          
BLAST of EY735944 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 104.76 bits (260), Expect = 3.061e-22
Identity = 69/179 (38.55%), Postives = 100/179 (55.87%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLDTKGPKIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERRDVNLPGVMVDLALLSKKDEEDI*RGGIPDHIDIIALCPVLKGPDLVWVR 508
            +HEYH ET+ N+RTA     +  IL    AV LDTKGP+IRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V +    A  +    EN   LG ++ VNLPG  VDL  +S+KD +D+ + G+   +D++    + K  D+  VR
Sbjct:   80 THEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKQKG--ADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKASDVHEVR 255          
BLAST of EY735944 vs. ExPASy Swiss-Prot
Match: KPYK1_TRYBB (Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=PYK1 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.061e-22
Identity = 60/156 (38.46%), Postives = 86/156 (55.13%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPKIRTGFLKDGKPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERRDVNLPGVMVDLALLSKKDEEDI*RGGIPDHIDII 463
            SHEYHQ T+NN+R A    G+   + LDTKGP+IRTG  KDG+ +    G  + ++TD  Y   G +    + Y +L   V+PG  I   DG ++  V+       L KC   N   L +RR +NLPG  VDL  +S+KD +D+   G+   +D+I
Sbjct:   57 SHEYHQTTINNVRAAAAELGLHIGIALDTKGPEIRTGLFKDGE-VSFAPGDIVCVTTDPAYEKVGTKEKFYIDYPQLTNAVRPGGSIYVDDGVMTLRVVSKEDDRTL-KCHVNNHHRLTDRRGINLPGCEVDLPAVSEKDRKDL-EFGVAQGVDMI 209          
BLAST of EY735944 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.998e-22
Identity = 64/173 (36.99%), Postives = 98/173 (56.65%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPKIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERRDVNLPGVMVDLALLSKKDEEDI*RGGIPDHIDIIALCPVLKGPDLVWVRS*FE 520
            SHE H+  ++ +R           ++LDTKGP+IRT  +KDG  I L++G+E+ +S +  ++G      ++Y+ L  DV  GS IL  DG +   V E N   G VKC   N+  L  ++ VNLPGV V+L  ++ KD +DI R GI +++D IA   V +  D++ +R   E
Sbjct:   39 SHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGL-IVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGLVELQVKEINKDKGEVKCDILNTGELKNKKGVNLPGVKVNLPGITDKDADDI-RFGIKENVDFIAASFVRRPSDVLDIRQILE 208          
BLAST of EY735944 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 3.998e-22
Identity = 64/173 (36.99%), Postives = 98/173 (56.65%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPKIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERRDVNLPGVMVDLALLSKKDEEDI*RGGIPDHIDIIALCPVLKGPDLVWVRS*FE 520
            SHE H+  ++ +R           ++LDTKGP+IRT  +KDG  I L++G+E+ +S +  ++G      ++Y+ L  DV  GS IL  DG +   V E N   G VKC   N+  L  ++ VNLPGV V+L  ++ KD +DI R GI +++D IA   V +  D++ +R   E
Sbjct:   39 SHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGL-IVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGLVELQVKEINKDKGEVKCDILNTGELKNKKGVNLPGVKVNLPGITDKDADDI-RFGIKENVDFIAASFVRRPSDVLDIRQILE 208          
BLAST of EY735944 vs. ExPASy Swiss-Prot
Match: KPYK_BACPY (Pyruvate kinase OS=Bacillus psychrophilus GN=pyk PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 5.222e-22
Identity = 64/175 (36.57%), Postives = 100/175 (57.14%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTAMVNTGILCAVMLDTKGPKIRTGFLKDGKPIQLKQGQEITISTDYTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERRDVNLPGVMVDLALLSKKDEEDI*RGGIPDHIDIIALCPVLKGPDLVWVRS*FEGH 526
            +H  H+  ++++R      G +  ++LDTKGP+IRT  + +GK ++L  GQ+I IS    ++G+ ++  +SY KL  DV  GSVIL  DG I   V   +V  GL+     NS  L   + VN+PGV V L  +++KD EDI   GI + +D IA   V +  D++ +R+  E +
Sbjct:   39 NHAEHKARIDSIRKVAREKGKVVGILLDTKGPEIRTHSMMNGK-LELVTGQKIDISMTQ-VEGNNDVFSVSYDKLIEDVNEGSVILLDDGLIQLEVTGKDVARGLIHTLIINSGSLSNNKGVNIPGVSVQLPGMTEKDAEDI-LFGIREGVDFIAASFVRRASDVMEIRALLENN 210          
BLAST of EY735944 vs. ExPASy Swiss-Prot
Match: KPYM_RAT (Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicus GN=Pkm2 PE=1 SV=3)

HSP 1 Score: 103.605 bits (257), Expect = 6.820e-22
Identity = 69/179 (38.55%), Postives = 99/179 (55.31%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLDTKGPKIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERRDVNLPGVMVDLALLSKKDEEDI*RGGIPDHIDIIALCPVLKGPDLVWVR 508
            +HEYH ET+ N+R A     +  IL    AV LDTKGP+IRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V E    A  +    EN   LG ++ VNLPG  VDL  +S+KD +D+ + G+   +D++    + K  D+  VR
Sbjct:   80 THEYHAETIKNVRAATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKEKG--ADYLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKAADVHEVR 255          
BLAST of EY735944 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 103.605 bits (257), Expect = 6.820e-22
Identity = 69/179 (38.55%), Postives = 99/179 (55.31%), Query Frame = 2
Query:    2 SHEYHQETLNNLRTA---MVNTGIL---CAVMLDTKGPKIRTGFLKDG--KPIQLKQGQEITISTD--YTIKGDENMICMSYKKLAVDVQPGSVILCSDGTISFTVLECNVKAGLVKCRCENSAMLGERRDVNLPGVMVDLALLSKKDEEDI*RGGIPDHIDIIALCPVLKGPDLVWVR 508
            +HEYH ET+ N+R A     +  IL    AV LDTKGP+IRTG +K      ++LK+G  + I+ D  Y  K DEN++ + YK +   V+ GS I   DG IS  V E    A  +    EN   LG ++ VNLPG  VDL  +S+KD +D+ + G+   +D++    + K  D+  VR
Sbjct:   80 THEYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLISLQVKEKG--ADFLVTEVENGGSLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKAADVHEVR 255          
The following BLAST results are available for this feature:
BLAST of EY735944 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
KPYK_STAA36.169e-2338.15Pyruvate kinase OS=Staphylococcus aureus (strain U... [more]
KPYK_EMENI6.169e-2337.21Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=... [more]
KPYM_PONAB3.061e-2238.55Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2... [more]
KPYM_HUMAN3.061e-2238.55Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYK1_TRYBB3.061e-2238.46Pyruvate kinase 1 OS=Trypanosoma brucei brucei GN=... [more]
KPYK_STAES3.998e-2236.99Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ3.998e-2236.99Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_BACPY5.222e-2236.57Pyruvate kinase OS=Bacillus psychrophilus GN=pyk P... [more]
KPYM_RAT6.820e-2238.55Pyruvate kinase isozymes M1/M2 OS=Rattus norvegicu... [more]
KPYM_MOUSE6.820e-2238.55Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-A04-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735944 ID=EY735944; Name=EY735944; organism=Citrus sinensis; type=EST; length=559bp
ATCTCATGAGTATCACCAGGAAACGCTTAATAATCTCAGAACTGCCATGG
TCAATACTGGGATTCTCTGCGCTGTTATGCTTGACACAAAGGGTCCAAAG
ATTCGAACTGGGTTCTTGAAAGATGGAAAGCCTATTCAGCTGAAACAAGG
TCAGGAAATTACCATATCTACTGATTACACCATAAAGGGTGACGAGAACA
TGATTTGCATGAGCTACAAAAAGTTGGCAGTGGATGTCCAGCCAGGAAGT
GTGATACTTTGTTCAGACGGCACAATCTCATTCACTGTTCTAGAATGTAA
TGTGAAAGCTGGTTTGGTTAAATGCCGCTGTGAGAACTCTGCTATGCTTG
GTGAAAGGAGAGATGTTAATCTCCCAGGCGTTATGGTGGATCTCGCACTC
TTGAGCAAGAAAGACGAGGAGGATATCTGAAGGGGGGGAATCCCCGATCA
CATTGACATAATTGCTCTGTGCCCTGTCCTTAAAGGTCCAGACTTGGTGT
GGGTCCGGAGCTAATTTGAAGGCCATGCTAGAATATCCGGCTGAGGTCAG
GGGTGGGAG
back to top