EY735942

Overview
NameEY735942
Unique NameEY735942
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY735942_ssr75 microsatellite EY735942_ssr75:75..84. BLAST: Citrus ESTs to Prunus persica proteins V1
EY735942_ssr338 microsatellite EY735942_ssr338:338..352. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig12329 contig Csv1_Contig12329:1..873. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY735942 vs. ExPASy Swiss-Prot
Match: SAP10_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Oryza sativa subsp. japonica GN=SAP10 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.069e-17
Identity = 53/160 (33.12%), Postives = 72/160 (45.00%), Query Frame = 2
Query:  224 LCVNNCGFTGNPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXVXIIKFSSEKSLRSRPIIRSGSS-DAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDGIARENPVIKAAKIVRV 700
            +C   CGF G+ AT+ +C KC+                         V  +         S  +I+  S     GTT      T  + K         NRC  CR+KVGL GF CRCG +FCG H       C++DYK+AGR+ IAR NP++ A KI ++
Sbjct:   17 MCAAGCGFFGSAATDGLCSKCYKQQQPQPRHLIGTAAGDSDKTSLKVVADL---------STLVIKDNSGVGGEGTTVMAPPATVTKAK---------NRCKACRKKVGLLGFPCRCGGMFCGAHA------CAFDYKAAGREAIARHNPLVVAPKINKI 152          
BLAST of EY735942 vs. ExPASy Swiss-Prot
Match: SAP8_ARATH (Putative zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Arabidopsis thaliana GN=SAP8 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.475e-16
Identity = 49/160 (30.63%), Postives = 68/160 (42.50%), Query Frame = 2
Query:  221 TLCVNNCGFTGNPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXVXIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDGIARENPVIKAAKIVRV 700
            +LC+  CGF     T N+C KC+N                             F  ++S R        +  A   T Q   +   +             C+ C++KVGL GF CRCG LF   HRY + H C  DYKSA  D +A++NPV+K  K+ R+
Sbjct:    6 SLCIRGCGFFSTSQTKNLCSKCYND----------------------------FLKDESARYLATFNVNTKAAEEVTAQEATVLGSK-----------GGCA-CKKKVGLLGFHCRCGHLFFASHRYPEEHSCPSDYKSAAIDVLAKQNPVVKGDKLFRL 125          
BLAST of EY735942 vs. ExPASy Swiss-Prot
Match: SAP10_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.516e-16
Identity = 51/165 (30.91%), Postives = 69/165 (41.82%), Query Frame = 2
Query:  206 VPETLTL-CVNNCGFTGNPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXVXIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDGIARENPVIKAAKIVR 697
            V ET  L C   CG  G    NN+C  C+                                 +  L+  P +R         T Q+Q            E     RC  C+RKVG+ GF+CRCG +FCG HRY + H C +DYK +GR  +A + P+I+A K+ R
Sbjct:    2 VNETEALPCEGGCGLYGTRVNNNLCSLCYK--------------------------------KSVLQHSPALRFEPE-----TEQSQCCPPTNSPAVEEEPVKKRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALATQLPLIRADKLQR 129          
BLAST of EY735942 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 4.441e-13
Identity = 31/68 (45.59%), Postives = 44/68 (64.71%), Query Frame = 2
Query:  500 EKRVVNRCSGCRRKVGL-TGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDGIARENPVIKAAKIVRV 700
            +K+  N C  C +K GL + + CRCG  FC  HRY++ H C+YDYKSAGR  +   NPV+ A K+ ++
Sbjct:  660 KKKTTNHCFLCGKKTGLASSYECRCGNNFCASHRYAETHGCTYDYKSAGRRYLHEANPVVNAPKLPKI 727          
The following BLAST results are available for this feature:
BLAST of EY735942 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP10_ORYSJ5.069e-1733.13Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ARATH1.475e-1630.63Putative zinc finger A20 and AN1 domain-containing... [more]
SAP10_ARATH2.516e-1630.91Zinc finger A20 and AN1 domain-containing stress-a... [more]
ANUB1_HUMAN4.441e-1345.59AN1-type zinc finger and ubiquitin domain-containi... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-008-A02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735942 ID=EY735942; Name=EY735942; organism=Citrus sinensis; type=EST; length=872bp
CCACGCGTCCGTCTCAATCCCTTCAAATCCCCACTCTCCTCTCTCGAACA
CCAAACCCTTCGCCCCATCACCCCCTCTCTCTCTAGAACTCTCACTTCTC
TTCGATTTAATCCCCTCTGTCTCTAAAGCTCTTAATTGGAGAAAAAAAAG
AGAGTTTTTCTCAGAAATGGCTCAGAAAACAGAAAAAGAAGAGACAGAGT
TCAAGGTTCCTGAAACTTTGACTCTTTGCGTAAACAACTGTGGCTTCACC
GGAAATCCAGCCACAAATAATATGTGCCAGAAATGTTTCAACGCAACCGC
TACCACCACCGCAAGCGCCGTTGCTGGTCCGAGTACGGGCGGCGGCGGCG
GCGGAGGAAGCGGTGTANCGATCATAAAGTTTTCTAGCGAGAAATCTTTG
AGATCTCGGCCTATCATCCGGTCTGGGTCATCCGATGCTGCCGGTACGAC
CGGTCAAAATCAGGAGTTGACGGATCGGCGAGAGAAGGAAGCCAACGTAG
AGAAACGAGTTGTGAATCGGTGCTCCGGTTGTCGACGAAAGGTTGGATTG
ACCGGATTTAGATGTCGCTGCGGGGAGCTGTTCTGCGGCGAACATCGGTA
CTCCGATCGTCACGATTGCAGCTATGATTATAAATCGGCCGGTCGCGACG
GCATCGCGAGAGAAAATCCGGTGATCAAAGCTGCCAAGATCGTTAGAGTT
TGAAAGCTTAATTTGAAAACACGATTGAGAGGTCAAAAATCAGATCCATT
TATACACGTCTTGAAACGATGTCCTTTCCGCAGATCTCTTCCTCAGGAAT
ATGGTGATCCAAGGATCCAAAGAGGGTTTAAAAAAAGGAGTGATCAAATT
TTTGGATTGTTGCTCTTTCGAG
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