EY735932

Overview
NameEY735932
Unique NameEY735932
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735932 vs. ExPASy Swiss-Prot
Match: RL18_SULAC (50S ribosomal protein L18P OS=Sulfolobus acidocaldarius GN=rpl18p PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.983e-16
Identity = 64/214 (29.91%), Postives = 96/214 (44.86%), Query Frame = 3
Query:   72 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMKTLMEDEPEKYSLTFVNTPER 710
            Y++K++RRREGKTDY  R   +  +         RFV R TNK +   +      GDI++A A++ EL  +YG +    N  AAY TG L   R +K           V+A                 A+ D+GL     G R+F  +KG++D GL +P  +    G  KD            + G H++AY + L  +  E Y+  F +  +R
Sbjct:    7 YRIKFRRRREGKTDYYTRYTYVINNA-------IRFVPRLTNKYVIVSVSKFDQKGDIMIAYAHSIELVKKYGWKGDTNNTPAAYLTGYLAGLRAVK---------SGVKA-----------------AVSDIGLFVPVKGGRIFAVIKGAIDAGLKVPVGD---LGKLKDR-----------VNGSHISAYAQKLKNENQELYNKLFSSYIQR 173          
BLAST of EY735932 vs. ExPASy Swiss-Prot
Match: RL18_SULIN (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.032e-15
Identity = 63/208 (30.29%), Postives = 96/208 (46.15%), Query Frame = 3
Query:   72 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMKTLMEDEPEKYSLTF 692
            Y++K++RRREGKT+Y  R   +        + + RF+VR TNK +  QI      GDI++ASA++ EL  ++  +    N  +AY TG L A R +K        +G  E                   + D+GL   + GN+VF A+KG++D GL IP                D  +    I G H+A Y + L  +  + Y+  F
Sbjct:    7 YKIKHRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLF 167          
BLAST of EY735932 vs. ExPASy Swiss-Prot
Match: RL18_SULIY (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 3
Query:   72 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMKTLMEDEPEKYSLTF 692
            Y++K +RRREGKT+Y  R   +        + + RF+VR TNK +  QI      GDI++ASA++ EL  ++  +    N  +AY TG L A R +K        +G  E                   + D+GL   + GN+VF A+KG++D GL IP                D  +    I G H+A Y + L  +  + Y+  F
Sbjct:    7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLF 167          
BLAST of EY735932 vs. ExPASy Swiss-Prot
Match: RL18_SULIM (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 3
Query:   72 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMKTLMEDEPEKYSLTF 692
            Y++K +RRREGKT+Y  R   +        + + RF+VR TNK +  QI      GDI++ASA++ EL  ++  +    N  +AY TG L A R +K        +G  E                   + D+GL   + GN+VF A+KG++D GL IP                D  +    I G H+A Y + L  +  + Y+  F
Sbjct:    7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLF 167          
BLAST of EY735932 vs. ExPASy Swiss-Prot
Match: RL18_SULIL (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 3
Query:   72 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMKTLMEDEPEKYSLTF 692
            Y++K +RRREGKT+Y  R   +        + + RF+VR TNK +  QI      GDI++ASA++ EL  ++  +    N  +AY TG L A R +K        +G  E                   + D+GL   + GN+VF A+KG++D GL IP                D  +    I G H+A Y + L  +  + Y+  F
Sbjct:    7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLF 167          
BLAST of EY735932 vs. ExPASy Swiss-Prot
Match: RL18_SULIK (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 3
Query:   72 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMKTLMEDEPEKYSLTF 692
            Y++K +RRREGKT+Y  R   +        + + RF+VR TNK +  QI      GDI++ASA++ EL  ++  +    N  +AY TG L A R +K        +G  E                   + D+GL   + GN+VF A+KG++D GL IP                D  +    I G H+A Y + L  +  + Y+  F
Sbjct:    7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLF 167          
BLAST of EY735932 vs. ExPASy Swiss-Prot
Match: RL18_SULIA (50S ribosomal protein L18P OS=Sulfolobus islandicus (strain M.16.27) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 7.721e-15
Identity = 63/208 (30.29%), Postives = 95/208 (45.67%), Query Frame = 3
Query:   72 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMKTLMEDEPEKYSLTF 692
            Y++K +RRREGKT+Y  R   +        + + RF+VR TNK +  QI      GDI++ASA++ EL  ++  +    N  +AY TG L A R +K        +G  E                   + D+GL   + GN+VF A+KG++D GL IP                D  +    I G H+A Y + L  +  + Y+  F
Sbjct:    7 YKIKPRRRREGKTNYYKRYVYVI-------SKQIRFIVRITNKYVIVQIAKIDPKGDIMVASAHSSELTKKFEWKGDENNTPSAYLTGYLAALRAVK--------KGVTE------------------CVADIGLHVPSKGNKVFYAIKGAIDAGLKIPIG--------------DISIENDRIKGEHIAKYAEKLKSENLDLYNKLF 167          
BLAST of EY735932 vs. ExPASy Swiss-Prot
Match: RL18_THEVO (50S ribosomal protein L18P OS=Thermoplasma volcanium GN=rpl18p PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.720e-14
Identity = 60/171 (35.09%), Postives = 78/171 (45.61%), Query Frame = 3
Query:   84 YKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLD 596
            +KR+  GKTDY  R+RL+            RF+VR TNK I AQI   S+ GD +LA+     L +YG+E+   N    Y  G                Y   VEA  +   VE         A+LD+G  K   G R+   LKG  D G+DIPH E  F     D K+L+
Sbjct:    3 FKRKVLGKTDYGRRLRLLKSKDR-------RFIVRITNKGIIAQIAEYSVNGDRILATITDKALSKYGIELRGNNLQICYLVG----------------YAAGVEA--QKAGVE--------TAVLDIGRKKFRKGGRIAACLKGITDSGVDIPHGEDVF----PDKKRLN 136          
BLAST of EY735932 vs. ExPASy Swiss-Prot
Match: RL5_SOLME (60S ribosomal protein L5 (Fragment) OS=Solanum melongena GN=RPL5 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 35/40 (87.50%), Postives = 35/40 (87.50%), Query Frame = 3
Query:  573 SKDSKQLDAEVHRKYIYGGHVAAYMKTLMEDEPEKYSLTF 692
            SKDSKQLDAEVHRKYIYGGHVAAYM  LMEDEPEKY   F
Sbjct:    2 SKDSKQLDAEVHRKYIYGGHVAAYMNILMEDEPEKYQSHF 41          
BLAST of EY735932 vs. ExPASy Swiss-Prot
Match: RL5_RABIT (60S ribosomal protein L5 (Fragments) OS=Oryctolagus cuniculus GN=RPL5 PE=1 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 7.227e-13
Identity = 34/45 (75.56%), Postives = 39/45 (86.67%), Query Frame = 3
Query:   39 KAQKSKAYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKY 173
            K  K+KAYFKRYQVK++RRREGKTDY AR RL+ QDKNKYNTP +
Sbjct:    4 KVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPAH 48          
The following BLAST results are available for this feature:
BLAST of EY735932 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
RL18_SULAC6.983e-1629.9150S ribosomal protein L18P OS=Sulfolobus acidocald... [more]
RL18_SULIN2.032e-1530.2950S ribosomal protein L18P OS=Sulfolobus islandicu... [more]
RL18_SULIY7.721e-1530.2950S ribosomal protein L18P OS=Sulfolobus islandicu... [more]
RL18_SULIM7.721e-1530.2950S ribosomal protein L18P OS=Sulfolobus islandicu... [more]
RL18_SULIL7.721e-1530.2950S ribosomal protein L18P OS=Sulfolobus islandicu... [more]
RL18_SULIK7.721e-1530.2950S ribosomal protein L18P OS=Sulfolobus islandicu... [more]
RL18_SULIA7.721e-1530.2950S ribosomal protein L18P OS=Sulfolobus islandicu... [more]
RL18_THEVO1.720e-1435.0950S ribosomal protein L18P OS=Thermoplasma volcani... [more]
RL5_SOLME7.227e-1387.5060S ribosomal protein L5 (Fragment) OS=Solanum mel... [more]
RL5_RABIT7.227e-1375.5660S ribosomal protein L5 (Fragments) OS=Oryctolagu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-H03-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735932 ID=EY735932; Name=EY735932; organism=Citrus sinensis; type=EST; length=850bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGCCAAAGCTCAAAAG
TCAAAAGCTTACTTTAAGCGATATCAAGTTAAGTACAAGAGAAGGCGAGA
GGGAAAGACTGACTATCGGGCTAGGATTCGCCTGATCAACCAAGATAAAA
ACAAGTACAACACGCCAAAGTATCGGTTTGTTGTGCGATTCACCAACAAA
GACATCACTGCACAAATTATATCTGCCAGCATAGCCGGGGATATAGTCCT
TGCATCTGCTTATGCCCATGAGCTTCCCCGTTATGGTCTTGAGGTGGGCC
TCACTAATTATGCAGCAGCTTATTGCACTGGACTCCTCTTGGCCCGCCGA
GTCCTGAAAATGCTTGAGATGGATGCTGAGTATGAGGGGAACGTTGAGGC
AACAGGAGAGGACTATTCAGTTGAGCCAACTGAGAACAGGAGGCCTTTCC
GTGCCCTGCTCGATGTTGGTCTTGTGAAAACAACTACTGGTAACCGTGTC
TTTGGCGCTCTTAAGGGTTCATTGGATGGTGGACTTGATATCCCTCACAG
TGAGAAGAGATTTGCTGGATTCAGTAAGGATAGTAAGCAACTTGATGCTG
AAGTTCACCGTAAATACATCTATGGTGGTCATGTTGCTGCCTACATGAAG
ACTTTGATGGAAGATGAGCCAGAAAAGTACAGTCTCACTTTTGTGAATAC
TCCAGAGAGGTATTGAGGCTGATAACCCTGAAAAATTGACAAGAAGGTAA
TGCTGGCCTCGTGCAGACCCCTACCCGATAAATCCGAGAGGAACCTCCAC
CGACCCCAGAAGTAAACCTTCAAGAAATCGCTTTAGGGGATGGAGGCGGC
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