EY735928

Overview
NameEY735928
Unique NameEY735928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P_MASBA (Glyceraldehyde-3-phosphate dehydrogenase OS=Mastigamoeba balamuthi GN=GAPD PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 4.006e-27
Identity = 67/148 (45.27%), Postives = 87/148 (58.78%), Query Frame = 3
Query:   69 KIGINGFGRIGRLVARVILQRD-DVELVAVNDPFITTDYMTYMFKYDSVHGQW------KHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEYKPE 491
            ++GINGFGRIGRLV RV+L R     +V +NDPFITTD M Y+FKYD+VHG++      K  +L++    TL      + V   +NP EIPW  +  E V+ES+G FT               V+I+APS DAPMFV GVN    K +
Sbjct:    4 RVGINGFGRIGRLVLRVLLSRGMPANVVLINDPFITTDAMAYIFKYDTVHGRFPGTVVGKEGKLEI----TLNGHVYDIAVSACKNPAEIPWGASNVEVVIESSGAFTTMEKAHLHQQGGAKKVLITAPSADAPMFVYGVNHQSLKAD 147          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P1_SYNY3 (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Synechocystis sp. (strain PCC 6803) GN=gap1 PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 3.391e-26
Identity = 64/145 (44.14%), Postives = 85/145 (58.62%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD---APMFVVGVNENEYKPE 491
            +KIGINGFGRIGRLVAR+ +    V LV +ND  +    + Y+FKYDS HG +      V  ++ ++  ++ +  F  RNP ++PW + GA+YVVESTG+FT               VIISAPSKD    P FVVGVN   Y  +
Sbjct:    2 LKIGINGFGRIGRLVARIAMANPQVTLVGIND-LVPASNLAYLFKYDSTHGSYGG--TVVAKEEGIVIDDQFIPCFSQRNPAQLPWGDLGADYVVESTGLFTTYATAENHLKAGAKRVIISAPSKDPEKIPTFVVGVNHLNYNAD 143          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3PA_GUITH (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Guillardia theta GN=GAPC1 PE=2 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 7.554e-26
Identity = 64/144 (44.44%), Postives = 90/144 (62.50%), Query Frame = 3
Query:   57 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVV-GVNENEYK 485
            M  V  GINGFGRIGRLVAR++++  + +L+ VN    T DYM Y FKYDS+HG+++  ++ V  D  ++ G++ +T    R+P++I WA+TG EY+ ESTGVF                VI SAP+KD  + VV GVN  +YK
Sbjct:   46 MQAVPCGINGFGRIGRLVARIMIKDPETKLLQVNAGSATPDYMAYQFKYDSIHGRYQ-GDVVVDGDDLVIDGQRVITT-RARDPKDIGWAKTGVEYLCESTGVFLTAEKAQPHIDAGVKKVIFSAPAKDDSLTVVMGVNAEDYK 187          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P_LACDT (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Lactarius deterrimus GN=GPD PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 1.289e-25
Identity = 61/115 (53.04%), Postives = 77/115 (66.96%), Query Frame = 3
Query:  138 VELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFVVGVNENEY 482
            V+++AV+DPFI   YM YMFKYDSVHG++K   +++KD K ++ G  P+TVF  R+P  I W   GA+YVVES+GVFT               VIISAPS DAPMFVVGVN + Y
Sbjct:    6 VKVLAVSDPFIDLQYMVYMFKYDSVHGRFKG-TVEIKDGKLVIDGH-PITVFQERDPANIQWGSVGADYVVESSGVFTTVDKASAHLKGGAKKVIISAPSADAPMFVVGVNLDAY 118          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P1_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap1 PE=3 SV=4)

HSP 1 Score: 115.161 bits (287), Expect = 1.683e-25
Identity = 63/147 (42.86%), Postives = 88/147 (59.86%), Query Frame = 3
Query:   57 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD---APMFVVGVNENEYKP 488
            M K+K+GINGFGRIGRLV R  +   ++E V +ND  +  D + Y+ KYDS HG+ +  +++ KDD  ++ G   +    VRNP E+PW + GA+YVVESTG+FT               VIISAP+KD       +VGVN + + P
Sbjct:    1 MAKLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGKLRS-QVEAKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGAKRVIISAPTKDPDRVRTLLVGVNHDLFDP 144          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3)

HSP 1 Score: 115.161 bits (287), Expect = 1.683e-25
Identity = 63/147 (42.86%), Postives = 88/147 (59.86%), Query Frame = 3
Query:   57 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD---APMFVVGVNENEYKP 488
            M K+K+GINGFGRIGRLV R  +   ++E V +ND  +  D + Y+ KYDS HG+ +  +++ KDD  ++ G   +    VRNP E+PW + GA+YVVESTG+FT               VIISAP+KD       +VGVN + + P
Sbjct:    1 MAKLKVGINGFGRIGRLVLRAGINNPNIEFVGIND-LVPPDNLAYLLKYDSTHGRLRS-QVETKDDGIVIDGHF-IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGARRVIISAPTKDPDRVRTLLVGVNHDLFDP 144          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3PG_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, glycosomal OS=Trypanosoma brucei brucei PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 1.091e-24
Identity = 63/153 (41.18%), Postives = 86/153 (56.21%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVI----LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVK-------DDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP-SKDAPMFVVGVNENEYKP 488
            +K+GINGFGRIGR+V + +    L  +++++VAV D      Y  Y  KYDSVHG++KH     K       DD  ++ G + + V   RNP ++PW + G EYV+ESTG+FT               V+ISAP S  A  FV+GVN N Y P
Sbjct:    3 IKVGINGFGRIGRMVFQALCDDGLLGNEIDVVAVVDMNTDARYFAYQMKYDSVHGKFKHSVSTTKSKPSVAKDDTLVVNGHRILCVKAQRNPADLPWGKLGVEYVIESTGLFTVKSAAEGHLRGGARKVVISAPASGGAKTFVMGVNHNNYNP 155          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P1_ESCF3 (Glyceraldehyde-3-phosphate dehydrogenase A OS=Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=gapA PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.425e-24
Identity = 59/140 (42.14%), Postives = 85/140 (60.71%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEY 482
            +K+GINGFGRIGR+V R   +R D+E+VA+ND  +  DYM YM KYDS HG++    ++VKD   ++ G+K + V   R+P  + W E G + V E+TG+F                V+++ PSKD  PMFV G N ++Y
Sbjct:    3 IKVGINGFGRIGRIVFRAAQKRSDIEIVAIND-LLDADYMAYMLKYDSTHGRF-DGTVEVKDGHLIVNGKK-IRVTAERDPANLKWDEVGVDVVAEATGIFLTDETARKHITAGAKKVVLTGPSKDNTPMFVKGANFDKY 139          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P_HAEIN (Glyceraldehyde-3-phosphate dehydrogenase OS=Haemophilus influenzae GN=gapA PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.861e-24
Identity = 62/140 (44.29%), Postives = 83/140 (59.29%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDA-PMFVVGVNENEY 482
            +KIGINGFGRIGR+V R    RDD+E+V +ND  I  +YM YM KYDS HG++    ++VKD   ++ G K + V   R+P  + W   G +  VE+TG+F                V+++ PSKDA PMFV GVN N Y
Sbjct:    3 IKIGINGFGRIGRIVFRAAQHRDDIEVVGIND-LIDVEYMAYMLKYDSTHGRF-DGTVEVKDGNLVVNG-KTIRVTAERDPANLNWGAIGVDIAVEATGLFLTDETARKHITAGAKKVVLTGPSKDATPMFVRGVNFNAY 139          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3PC_TRYBB (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Trypanosoma brucei brucei PE=1 SV=3)

HSP 1 Score: 111.309 bits (277), Expect = 2.430e-24
Identity = 60/143 (41.96%), Postives = 87/143 (60.84%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK-DAPMFVVGVNENEYKPE 491
            +++GINGFGRIGR+V R   +R+D+E+V +ND  +  DYM YM KYDS HG+++   ++V+    ++ G+K + V   R+P  + W E   + VVESTG+F                V+I+ PSK D PMFV+GVN   YK E
Sbjct:    3 IRVGINGFGRIGRVVFRAAQRRNDIEIVGIND-LLDADYMAYMLKYDSTHGRFE-GAVEVQGGALVVNGKK-IRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKDDTPMFVMGVNHTTYKGE 142          
The following BLAST results are available for this feature:
BLAST of EY735928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 312
Match NameE-valueIdentityDescription
G3P_MASBA4.006e-2745.27Glyceraldehyde-3-phosphate dehydrogenase OS=Mastig... [more]
G3P1_SYNY33.391e-2644.14Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Syne... [more]
G3PA_GUITH7.554e-2644.44Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]
G3P_LACDT1.289e-2553.04Glyceraldehyde-3-phosphate dehydrogenase (Fragment... [more]
G3P1_ANAVT1.683e-2542.86Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3P1_ANASP1.683e-2542.86Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anab... [more]
G3PG_TRYBB1.091e-2441.18Glyceraldehyde-3-phosphate dehydrogenase, glycosom... [more]
G3P1_ESCF31.425e-2442.14Glyceraldehyde-3-phosphate dehydrogenase A OS=Esch... [more]
G3P_HAEIN1.861e-2444.29Glyceraldehyde-3-phosphate dehydrogenase OS=Haemop... [more]
G3PC_TRYBB2.430e-2441.96Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-G11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735928 ID=EY735928; Name=EY735928; organism=Citrus sinensis; type=EST; length=494bp
CACGCGTCCGCTTTCTTCACCACTCTTTCACCGCTCAATTTCATCTCTCG
AGAATCATGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATTGG
TAGGCTGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGTTG
CTGTTAATGATCCCTTTATCACAACCGATTACATGACATACATGTTTAAG
TACGACAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAGGA
CGATAAGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTA
GGAACCCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTG
GAGTCGACTGGAGTCTTTACTGACAAGGATAAGGCTGCTGCCCATTTGAA
GGGTGGTGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTA
TGTTTGTTGTCGGTGTCAATGAAAACGAGTACAAACCAGAGCTC
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