EY735928

Overview
NameEY735928
Unique NameEY735928
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3PA_GRAVE (Glyceraldehyde-3-phosphate dehydrogenase, chloroplastic OS=Gracilaria verrucosa GN=GAPA PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14
Identity = 54/146 (36.99%), Postives = 77/146 (52.74%), Query Frame = 3
Query:   63 KVKIGINGFGRIGRLVARVILQRDD--VELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPM--FVVGVNENEY 482
            KV++ INGFGRIGR   R    R D  +++V +ND   T+   T  ++ KYDS+ G +    +  +D  T+    K + V   RNP E+PW E   + VVE+TGVF                V+I+AP K   +  FVVGVN++ Y
Sbjct:   80 KVRVAINGFGRIGRNFIRCWAGRTDSNMDVVCIND---TSGVKTASHLLKYDSILGTFDSDVVAGEDSITV--DGKTIKVVSNRNPLELPWKEMEIDIVVEATGVFVDAVGAGKHIQAGAKKVLITAPGKGEGVGTFVVGVNDHLY 220          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P2_STAAR (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus aureus (strain MRSA252) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 3.889e-14
Identity = 44/139 (31.65%), Postives = 74/139 (53.24%), Query Frame = 3
Query:   72 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 479
            I ING GRIGR+V R+ LQ  ++ +VA+N  +   + + ++  YD+ HG+   + LKV+  +  L  G+  + +   RNPE +PW E   +  +++TG F                V+++ PSK     M V GVN+++
Sbjct:    5 IAINGMGRIGRMVLRIALQNKNLNVVAINASY-PPETIAHLINYDTTHGK---YNLKVEPIENGLQVGDHKIKLVADRNPENLPWKELDIDIAIDATGKFNHGDKAIAHIKAGAKKVLLTGPSKGGHVQMVVKGVNDDQ 139          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPW (D-erythrose-4-phosphate dehydrogenase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=epd PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 6.633e-14
Identity = 46/148 (31.08%), Postives = 82/148 (55.41%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVNENEYKPE 491
            +++ ING+GRIGR + R + +   RD +++VA+N+     + M ++ +YD+ HG++ H ++K+ D++ ++ G+  + +    NP  +PW E   + V E+TGV                 V+IS PS    DA + V GVN++  K E
Sbjct:    2 IRVAINGYGRIGRSILRAVYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DEQHMIIGDDAIKLLHEPNPANLPWQEMDIDIVFEATGVINDRQACEAHIEAGARQVLISHPSSSDVDATI-VYGVNQDLLKAE 145          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P_BORBU (Glyceraldehyde-3-phosphate dehydrogenase OS=Borrelia burgdorferi GN=gap PE=1 SV=3)

HSP 1 Score: 75.8702 bits (185), Expect = 1.131e-13
Identity = 49/151 (32.45%), Postives = 86/151 (56.95%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMT--YMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFT-----XXXXXXXXXXXXXXXVIISAPSKD-APMFVVGVNENEYKPEL 494
            +K+ INGFGRIGR V ++  +R  +++VA+ND    TD  T  ++ KYDS  G + + +++ +D   ++ G + + +   R+P+ +PWA+ G + V+ESTGVF+                    VI++ P+KD     V+GVN+++   +L
Sbjct:    1 MKLAINGFGRIGRNVFKIAFERG-IDIVAIND---LTDPKTLAHLLKYDSTFGVY-NKKVESRDGAIVVDGRE-IKIIAERDPKNLPWAKLGIDVVIESTGVFSSATSDKGGYLDHVNHAGAKKVILTVPAKDEIKTIVLGVNDHDINSDL 145          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.131e-13
Identity = 44/147 (29.93%), Postives = 80/147 (54.42%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVILQR---DDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD--APMFVVGVNENEYKPE 491
            +K+ INGFGRIGR + R + +    +++++VA+N+     + + ++ KYD+ HG++    +K+ +D   + G+  + +F   NP E+PW   G + V+E TGV+                V+ S P+ +      V G+N++E KPE
Sbjct:    3 IKLAINGFGRIGRNIVRALYESGLSNEIKIVAINE-LADPEAIAHLLKYDTSHGRF-FFPVKLGEDTISVAGDA-IALFCEPNPAELPWKTLGVDVVLECTGVYHSREHAQLHLTAGAKKVLFSHPADNDVDATIVYGINDDELKPE 146          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: E4PD_SHEHH (D-erythrose-4-phosphate dehydrogenase OS=Shewanella halifaxensis (strain HAW-EB4) GN=epd PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.521e-13
Identity = 43/147 (29.25%), Postives = 80/147 (54.42%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKD--APMFVVGVNENEYKPE 491
            +++ ING+GRIGR + R + +   RD +++VA+N+     + M ++ +YD+ HG++ H ++K+ D++ ++ G+  + +    NP  +PW E   + V E+TGV                 V+IS PS +      V GVN++  + E
Sbjct:    2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DNQHMIIGDDAIKLLHEPNPANLPWKELDIDIVYEATGVINDRQECEAHLKAGAKQVLISHPSSNDVDATIVYGVNQDLLRAE 145          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: E4PD_SHEPA (D-erythrose-4-phosphate dehydrogenase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=epd PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.292e-13
Identity = 45/148 (30.41%), Postives = 83/148 (56.08%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVILQ---RDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK---DAPMFVVGVNENEYKPE 491
            +++ ING+GRIGR + R + +   RD +++VA+N+     + M ++ +YD+ HG++ H ++K+ D++ ++ G+  + +    +P ++PW E   + V E+TGV                 V+IS PS    DA + V GVN++  K E
Sbjct:    2 IRVAINGYGRIGRSILRALYESAKRDRIQIVAINE-LAKPEAMLHLTQYDTTHGRF-HTQVKL-DNQHMIIGDDAIKLLHEPDPAKLPWKEMDIDIVFEATGVINDRLECEAHIQAGAKQVLISHPSSSDVDATI-VFGVNQDLLKAE 145          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P_TREPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Treponema pallidum GN=gap PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13
Identity = 50/152 (32.89%), Postives = 74/152 (48.68%), Query Frame = 3
Query:   66 VKIGINGFGRIGRLVARVILQRD----DVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVR-NPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAP------SKDAPMFVVGVNENEYKP 488
            +++ INGFGRIGRLV + + ++     + ++ AV D      Y  Y  KYDSV G+         +D   + G +   V G    P ++PW + G E V+E+TG++                VIISAP      SK     V+GVNE+E+ P
Sbjct:    1 MRVAINGFGRIGRLVLQAMAEQKLLGKEFDVAAVVDLSTDARYFAYQLKYDSVQGKMGSSLSAPAEDILEVGGHRIKCVCGRGLKPSQLPWKDLGIEVVIEATGIYA-NESSYGHLEAGAKRVIISAPAKSSDASKPVKTIVMGVNEHEFDP 151          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P2_STAES (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13
Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 3
Query:   72 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 479
            I ING GRIGR+V R+ L   ++ + A+N  +   + + ++  YD+ HG +   + KV+  +  +      + +   RNPE +PW E   + V+E+TG F                V+++ PSK  D  M V GVN+N+
Sbjct:    5 IAINGMGRIGRMVLRIALNNKNLNVKAINASY-PPETIAHLLNYDTTHGVY---DKKVEPIESGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQ 139          
BLAST of EY735928 vs. ExPASy Swiss-Prot
Match: G3P2_STAEQ (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=gapA2 PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 5.615e-13
Identity = 43/139 (30.94%), Postives = 71/139 (51.08%), Query Frame = 3
Query:   72 IGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD-DKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSK--DAPMFVVGVNENE 479
            I ING GRIGR+V R+ L   ++ + A+N  +   + + ++  YD+ HG +   + KV+  +  +      + +   RNPE +PW E   + V+E+TG F                V+++ PSK  D  M V GVN+N+
Sbjct:    5 IAINGMGRIGRMVLRIALNNKNLNVKAINASY-PPETIAHLLNYDTTHGVY---DKKVEPIESGIKVNGHEIKLLSDRNPENLPWNEMDIDVVIEATGKFNHGDKAVAHINAGAKKVLLTGPSKGGDVQMIVKGVNDNQ 139          
The following BLAST results are available for this feature:
BLAST of EY735928 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 312
Match NameE-valueIdentityDescription
G3PA_GRAVE3.889e-1436.99Glyceraldehyde-3-phosphate dehydrogenase, chloropl... [more]
G3P2_STAAR3.889e-1431.65Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
E4PD_SHEPW6.633e-1431.08D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
G3P_BORBU1.131e-1332.45Glyceraldehyde-3-phosphate dehydrogenase OS=Borrel... [more]
E4PD_PSEHT1.131e-1329.93D-erythrose-4-phosphate dehydrogenase OS=Pseudoalt... [more]
E4PD_SHEHH2.521e-1329.25D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
E4PD_SHEPA3.292e-1330.41D-erythrose-4-phosphate dehydrogenase OS=Shewanell... [more]
G3P_TREPA5.615e-1332.89Glyceraldehyde-3-phosphate dehydrogenase OS=Trepon... [more]
G3P2_STAES5.615e-1330.94Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]
G3P2_STAEQ5.615e-1330.94Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Stap... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-G11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735928 ID=EY735928; Name=EY735928; organism=Citrus sinensis; type=EST; length=494bp
CACGCGTCCGCTTTCTTCACCACTCTTTCACCGCTCAATTTCATCTCTCG
AGAATCATGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATTGG
TAGGCTGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGTTG
CTGTTAATGATCCCTTTATCACAACCGATTACATGACATACATGTTTAAG
TACGACAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAGGA
CGATAAGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTA
GGAACCCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTG
GAGTCGACTGGAGTCTTTACTGACAAGGATAAGGCTGCTGCCCATTTGAA
GGGTGGTGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTA
TGTTTGTTGTCGGTGTCAATGAAAACGAGTACAAACCAGAGCTC
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