EY735925

Overview
NameEY735925
Unique NameEY735925
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH601_RHOBA (60 kDa chaperonin 1 OS=Rhodopirellula baltica GN=groL1 PE=3 SV=2)

HSP 1 Score: 184.111 bits (466), Expect = 8.509e-46
Identity = 103/206 (50.00%), Postives = 138/206 (66.99%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPI--EGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGMEI-TGVISPIWPT 833
            AK I FD  +R  + AG+ KL+ AV  TLGPRGRN VLD+ +GSPKV  DGVT+A  IEL DP EN GA L++E ASKTND AGDGTTTA+VL+  I + GL  V +GA+P++L RGI K V   + ++ K A PI  + + DIK VATI+  ND  IG ++A +  +VG + V+++E   S E  V++ EGM+   G +SP + T
Sbjct:    2 AKQIVFDDDARGPLLAGVSKLARAVRSTLGPRGRNAVLDKGWGSPKVTKDGVTVAEDIELDDPFENLGAQLVKEAASKTNDVAGDGTTTATVLSEAIFREGLKMVATGADPMALSRGIQKAVDTAIAQIAKMATPINEKSKSDIKQVATIAGNNDPQIGDVLADAFTKVGKNGVITVEEGRSNETYVDVVEGMQFDRGFLSPHFVT 207          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH601_MYCS2 (60 kDa chaperonin 1 OS=Mycobacterium smegmatis GN=groL1 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.509e-46
Identity = 100/204 (49.02%), Postives = 145/204 (71.08%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGMEI-TGVISPIWPT 833
            AK IA+D+ +R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP+ LKRGI+K V  +   L K A  +E ++ I A A ISAG D  IG +IA++  +VG + V+++E S++F   +EL EGM    G IS  + T
Sbjct:    2 AKTIAYDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKSAKEVETKEQIAATAGISAG-DQSIGDLIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVT 204          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH601_MYCGI (60 kDa chaperonin 1 OS=Mycobacterium gilvum (strain PYR-GCK) GN=groL1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.509e-46
Identity = 100/204 (49.02%), Postives = 145/204 (71.08%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGMEI-TGVISPIWPT 833
            AK IA+D+ +R  ++ G++ L+DAV +TLGP+GRNVVL++ +G+P + NDGV+IA+ IEL DP E  GA L++EVA KT+D AGDGTTTA+VLA+ +++ GL +V +GANP+ LKRGI+K V  +   L K A  +E ++ I A A ISAG D  IG +IA++  +VG + V+++E S++F   +EL EGM    G IS  + T
Sbjct:    2 AKTIAYDEEARRGLERGLNSLADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEAVTQGLLKSAKEVETKEQIAATAAISAG-DVQIGELIAEAMDKVGNEGVITVEESNTFGLQLELTEGMRFDKGYISGYFVT 204          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH601_GLUDA (60 kDa chaperonin 1 OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) GN=groL1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.509e-46
Identity = 99/205 (48.29%), Postives = 140/205 (68.29%), Query Frame = 3
Query:  225 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGMEI-TGVISPIWPT 833
            +AKD+ F   +R  M  G+D L+DAV +TLGP+GRNVVLD+ FG+P++  DGV++A+ IELAD  EN GA ++REVASKTND AGDGTTTA+VLA+ I++ G  +V +G NP+ LKRGIDK V  +V +L+K    I    +   V TISA  +  IG MI+Q+  +VG + V+++E +      +++ EGM+   G ISP + T
Sbjct:    2 AAKDVKFGGDARQRMLRGVDILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEIELADKFENMGAQMVREVASKTNDVAGDGTTTATVLAQAIVREGAKAVAAGMNPMDLKRGIDKAVIAVVEELKKNTKKITTPAETAQVGTISANGEHEIGEMISQAMQKVGSEGVITVEEAKGLHTELDVVEGMQFDRGYISPYFIT 206          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH601_ERYLH (60 kDa chaperonin 1 OS=Erythrobacter litoralis (strain HTCC2594) GN=groL1 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 8.509e-46
Identity = 95/205 (46.34%), Postives = 139/205 (67.80%), Query Frame = 3
Query:  225 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGMEI-TGVISPIWPT 833
            +AK++ F   +R  M  G+D L++AV +TLGP+GRNVV+++ FG+P++  DGVT+A+ IEL D  EN GA ++REVASK ND AGDGTTTA+VLA+ I++ G  +V +G NP+ LKRGID  V  +V  LE  A  +    +I  VATISA  D+ +G  +A++  +VG + V+++E + S E  +E  EGM+   G +SP + T
Sbjct:    2 AAKEVKFASDARDRMLRGVDTLANAVKVTLGPKGRNVVIEKSFGAPRITKDGVTVAKEIELKDKFENMGAQMLREVASKQNDKAGDGTTTATVLAQAIVREGAKAVAAGMNPIDLKRGIDLAVGTVVKDLESHAKKVSANSEIAQVATISANGDETVGRFLAEAMDKVGNEGVITVEEAKSLETELETVEGMQFDRGYLSPYFVT 206          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_STRTD (60 kDa chaperonin OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=groL PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.111e-45
Identity = 97/192 (50.52%), Postives = 135/192 (70.31%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGME 800
            AKDI F   +RAAM  G+D L+D V +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I++ GL +VT+GANP+ ++RGI+  V   V +L+  A P+  ++ I  VA +S+   + +G  I+++  +VG D V++IE S   E  +E+ EGM+
Sbjct:    2 AKDIKFSSDARAAMVRGVDTLADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIEAAVAAAVEELKVIAQPVANKEAIAQVAAVSS-RSEKVGEYISEAMERVGNDGVITIEESRGMETELEVVEGMQ 192          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_STRT2 (60 kDa chaperonin OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=groL PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.111e-45
Identity = 97/192 (50.52%), Postives = 135/192 (70.31%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGME 800
            AKDI F   +RAAM  G+D L+D V +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I++ GL +VT+GANP+ ++RGI+  V   V +L+  A P+  ++ I  VA +S+   + +G  I+++  +VG D V++IE S   E  +E+ EGM+
Sbjct:    2 AKDIKFSSDARAAMVRGVDTLADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIEAAVAAAVEELKVIAQPVANKEAIAQVAAVSS-RSEKVGEYISEAMERVGNDGVITIEESRGMETELEVVEGMQ 192          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_STRT1 (60 kDa chaperonin OS=Streptococcus thermophilus (strain CNRZ 1066) GN=groL PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.111e-45
Identity = 97/192 (50.52%), Postives = 135/192 (70.31%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGME 800
            AKDI F   +RAAM  G+D L+D V +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL D  EN GA L+ EVASKTND AGDGTTTA+VL + I++ GL +VT+GANP+ ++RGI+  V   V +L+  A P+  ++ I  VA +S+   + +G  I+++  +VG D V++IE S   E  +E+ EGM+
Sbjct:    2 AKDIKFSSDARAAMVRGVDTLADTVKVTLGPKGRNVVLEKAFGSPLITNDGVTIAKEIELEDHFENMGAKLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPIGIRRGIEAAVAAAVEELKVIAQPVANKEAIAQVAAVSS-RSEKVGEYISEAMERVGNDGVITIEESRGMETELEVVEGMQ 192          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_SHISS (60 kDa chaperonin OS=Shigella sonnei (strain Ss046) GN=groL PE=3 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 1.111e-45
Identity = 95/201 (47.26%), Postives = 139/201 (69.15%), Query Frame = 3
Query:  225 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGMEI-TGVISP 821
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   V +L+  + P      I  V TISA +D+ +G +IA++  +VG + V+++E  +  ++ +++ EGM+   G +SP
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSP 202          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_SHIFL (60 kDa chaperonin OS=Shigella flexneri GN=groL PE=3 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 1.111e-45
Identity = 95/201 (47.26%), Postives = 139/201 (69.15%), Query Frame = 3
Query:  225 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGMEI-TGVISP 821
            +AKD+ F   +R  M  G++ L+DAV +TLGP+GRNVVLD+ FG+P +  DGV++AR IEL D  EN GA +++EVASK ND+AGDGTTTA+VLA+ II  GL +V +G NP+ LKRGIDK V   V +L+  + P      I  V TISA +D+ +G +IA++  +VG + V+++E  +  ++ +++ EGM+   G +SP
Sbjct:    2 AAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSP 202          
The following BLAST results are available for this feature:
BLAST of EY735925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH601_RHOBA8.509e-4650.0060 kDa chaperonin 1 OS=Rhodopirellula baltica GN=g... [more]
CH601_MYCS28.509e-4649.0260 kDa chaperonin 1 OS=Mycobacterium smegmatis GN=... [more]
CH601_MYCGI8.509e-4649.0260 kDa chaperonin 1 OS=Mycobacterium gilvum (strai... [more]
CH601_GLUDA8.509e-4648.2960 kDa chaperonin 1 OS=Gluconacetobacter diazotrop... [more]
CH601_ERYLH8.509e-4646.3460 kDa chaperonin 1 OS=Erythrobacter litoralis (st... [more]
CH60_STRTD1.111e-4550.5260 kDa chaperonin OS=Streptococcus thermophilus (s... [more]
CH60_STRT21.111e-4550.5260 kDa chaperonin OS=Streptococcus thermophilus (s... [more]
CH60_STRT11.111e-4550.5260 kDa chaperonin OS=Streptococcus thermophilus (s... [more]
CH60_SHISS1.111e-4547.2660 kDa chaperonin OS=Shigella sonnei (strain Ss046... [more]
CH60_SHIFL1.111e-4547.2660 kDa chaperonin OS=Shigella flexneri GN=groL PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-G08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735925 ID=EY735925; Name=EY735925; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGGTCCTCTCGCAGCTTCTACTTGTTGGTACCTTATCCGAA
ACAATTTCCCTCAGCAGACCCTTTACTCCGTTTGGTTGATTGTTCGAAAT
GGCTTCTGCTAACGCCCTTTCTTCGGCTTCCATTCTTTGCTCTCCCAAAC
AGGGGAGCTTGAGGAGGAGAGGAAATCAGAATCAGGGTCAGAGAGTAAAT
TACAGGAGATTCGCTGTTAGAGCGTCTGCCAAAGATATTGCTTTTGACCA
GAGGTCCAGGGCCGCAATGCAGGCCGGCATCGATAAGCTTTCCGATGCTG
TTGGCCTTACTCTTGGTCCAAGAGGGAGAAATGTTGTTCTGGATGAATTT
GGGAGTCCGAAAGTGGTTAATGATGGAGTAACAATAGCCCGAGCTATTGA
GCTCGCAGATCCCATGGAAAATGCTGGTGCTGCTCTTATTAGGGAGGTTG
CAAGCAAAACCAATGACTCTGCTGGTGATGGAACAACAACTGCATCAGTT
CTTGCACGAGAAATAATTAAACTAGGACTCCTGAGTGTCACGTCTGGTGC
AAATCCTGTCTCCTTGAAGAGAGGGATTGATAAAACTGTACATGGGTTGG
TANAAAAGTTGGAAAAAANGGCCANGCCTATCGAAGGTCGTGATGATATC
AAAGCTGTTGCTACCATCTCTGCTGGGAATGATGACCTGATTGGGACAAT
GATCGCCCAATCCACTTGACAAGTTGGTCCTGATTGCGTCTTGTCCATCG
AATCATCATCATCATTTGAAAATAATGTTGAACTTGAGGAAGGAATGGAA
ATTACGGGGGTAATCTCTCCCATTTGGCCAACCCTGAGAATTCTTGGCGA
CTG
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