EY735925

Overview
NameEY735925
Unique NameEY735925
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length853
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_LISMC (60 kDa chaperonin OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 107/204 (52.45%), Postives = 148/204 (72.55%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGMEI-TGVISPIWPT 833
            AKDI F + +R AM  G+D+L++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV ++RGI+K V   + +L+  + PIE ++ I  VA IS+G D+ +G +IA++  +VG D V++IE S  F   +++ EGM+   G  SP   T
Sbjct:    2 AKDIKFSEDARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISSG-DEEVGKLIAEAMERVGNDGVITIEESKGFATELDVVEGMQFDRGYTSPYMVT 204          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_LISIN (60 kDa chaperonin OS=Listeria innocua GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 107/204 (52.45%), Postives = 148/204 (72.55%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGMEI-TGVISPIWPT 833
            AKDI F + +R AM  G+D+L++AV +TLGP+GRNVVL++ FGSP + NDGVTIA+ IEL DP EN GA L+ EVASKTND AGDGTTTA+VLA+ +I+ GL +VT+GANPV ++RGI+K V   + +L+  + PIE ++ I  VA IS+G D+ +G +IA++  +VG D V++IE S  F   +++ EGM+   G  SP   T
Sbjct:    2 AKDIKFSEDARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEGLKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISSG-DEEVGKLIAEAMERVGNDGVITIEESKGFATELDVVEGMQFDRGYTSPYMVT 204          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_CLOBM (60 kDa chaperonin OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 100/192 (52.08%), Postives = 145/192 (75.52%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGME 800
            AK + F +++R +M+AG+DKL+D V +TLGP+GRNVVLD+ FGSP + NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI K V   V +++  + P+ G++DI  VA ISA +++ +G +IA +  +VG D V+++E S S   ++E+ EGM+
Sbjct:    2 AKSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISKPVNGKEDIARVAAISAASEE-VGKLIADAMERVGNDGVITVEESKSMGTDLEVVEGMQ 192          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_CLOBL (60 kDa chaperonin OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 100/192 (52.08%), Postives = 145/192 (75.52%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGME 800
            AK + F +++R +M+AG+DKL+D V +TLGP+GRNVVLD+ FGSP + NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI K V   V +++  + P+ G++DI  VA ISA +++ +G +IA +  +VG D V+++E S S   ++E+ EGM+
Sbjct:    2 AKSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISKPVNGKEDIARVAAISAASEE-VGKLIADAMERVGNDGVITVEESKSMGTDLEVVEGMQ 192          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_CLOBK (60 kDa chaperonin OS=Clostridium botulinum (strain Okra / Type B1) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 100/192 (52.08%), Postives = 145/192 (75.52%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGME 800
            AK + F +++R +M+AG+DKL+D V +TLGP+GRNVVLD+ FGSP + NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI K V   V +++  + P+ G++DI  VA ISA +++ +G +IA +  +VG D V+++E S S   ++E+ EGM+
Sbjct:    2 AKSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISKPVNGKEDIARVAAISAASEE-VGKLIADAMERVGNDGVITVEESKSMGTDLEVVEGMQ 192          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_CLOBJ (60 kDa chaperonin OS=Clostridium botulinum (strain Kyoto / Type A2) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 100/192 (52.08%), Postives = 145/192 (75.52%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGME 800
            AK + F +++R +M+AG+DKL+D V +TLGP+GRNVVLD+ FGSP + NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI K V   V +++  + P+ G++DI  VA ISA +++ +G +IA +  +VG D V+++E S S   ++E+ EGM+
Sbjct:    2 AKSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISKPVNGKEDIARVAAISAASEE-VGKLIADAMERVGNDGVITVEESKSMGTDLEVVEGMQ 192          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_CLOBH (60 kDa chaperonin OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 100/192 (52.08%), Postives = 145/192 (75.52%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGME 800
            AK + F +++R +M+AG+DKL+D V +TLGP+GRNVVLD+ FGSP + NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI K V   V +++  + P+ G++DI  VA ISA +++ +G +IA +  +VG D V+++E S S   ++E+ EGM+
Sbjct:    2 AKSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISKPVNGKEDIARVAAISAASEE-VGKLIADAMERVGNDGVITVEESKSMGTDLEVVEGMQ 192          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_CLOB6 (60 kDa chaperonin OS=Clostridium botulinum (strain 657 / Type Ba4) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 100/192 (52.08%), Postives = 145/192 (75.52%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGME 800
            AK + F +++R +M+AG+DKL+D V +TLGP+GRNVVLD+ FGSP + NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI K V   V +++  + P+ G++DI  VA ISA +++ +G +IA +  +VG D V+++E S S   ++E+ EGM+
Sbjct:    2 AKSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISKPVNGKEDIARVAAISAASEE-VGKLIADAMERVGNDGVITVEESKSMGTDLEVVEGMQ 192          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_CLOB1 (60 kDa chaperonin OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 100/192 (52.08%), Postives = 145/192 (75.52%), Query Frame = 3
Query:  228 AKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGME 800
            AK + F +++R +M+AG+DKL+D V +TLGP+GRNVVLD+ FGSP + NDGVTIAR IEL DP EN GA L++EVA+KTND AGDGTTTA++LA+ II+ GL +VT+GANP+ ++ GI K V   V +++  + P+ G++DI  VA ISA +++ +G +IA +  +VG D V+++E S S   ++E+ EGM+
Sbjct:    2 AKSLLFGEQARRSMEAGVDKLADTVRVTLGPKGRNVVLDKKFGSPLITNDGVTIAREIELEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPIQIRTGIRKAVEKAVEEIKVISKPVNGKEDIARVAAISAASEE-VGKLIADAMERVGNDGVITVEESKSMGTDLEVVEGMQ 192          
BLAST of EY735925 vs. ExPASy Swiss-Prot
Match: CH60_CHLTE (60 kDa chaperonin OS=Chlorobium tepidum GN=groL PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.694e-50
Identity = 102/205 (49.76%), Postives = 146/205 (71.22%), Query Frame = 3
Query:  225 SAKDIAFDQRSRAAMQAGIDKLSDAVGLTLGPRGRNVVLDE-FGSPKVVNDGVTIARAIELADPMENAGAALIREVASKTNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSLKRGIDKTVHGLVXKLEKXAXPIEGRDDIKAVATISAGNDDLIGTMIAQST*QVGPDCVLSIESSSSFENNVELEEGMEI-TGVISPIWPT 833
            +AKDI FD  +R  ++ G+DKL++AV +TLGP GRNV++D+ FG+P    DGVT+A+ IEL DP+EN GA ++REVASKT+D AGDGTTTA+VLA+ I + GL +VT+GA P+ LKRGID+ V  +V +L   +  I G+ +I  V TISA ND  IG +IA++  +VG D V+++E +   E  +++ EGM+   G +SP + T
Sbjct:    2 TAKDILFDAEARTKLKVGVDKLANAVKVTLGPAGRNVLIDKKFGAPTSTKDGVTVAKEIELVDPVENMGAQMVREVASKTSDVAGDGTTTATVLAQAIYREGLKNVTAGARPIDLKRGIDRAVKEVVAELRNISRSISGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMETELKVVEGMQFDRGYLSPYFVT 206          
The following BLAST results are available for this feature:
BLAST of EY735925 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60_LISMC5.694e-5052.4560 kDa chaperonin OS=Listeria monocytogenes seroty... [more]
CH60_LISIN5.694e-5052.4560 kDa chaperonin OS=Listeria innocua GN=groL PE=3... [more]
CH60_CLOBM5.694e-5052.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBL5.694e-5052.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBK5.694e-5052.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBJ5.694e-5052.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOBH5.694e-5052.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOB65.694e-5052.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CLOB15.694e-5052.0860 kDa chaperonin OS=Clostridium botulinum (strain... [more]
CH60_CHLTE5.694e-5049.7660 kDa chaperonin OS=Chlorobium tepidum GN=groL PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-G08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735925 ID=EY735925; Name=EY735925; organism=Citrus sinensis; type=EST; length=853bp
CCACGCGTCCGGTCCTCTCGCAGCTTCTACTTGTTGGTACCTTATCCGAA
ACAATTTCCCTCAGCAGACCCTTTACTCCGTTTGGTTGATTGTTCGAAAT
GGCTTCTGCTAACGCCCTTTCTTCGGCTTCCATTCTTTGCTCTCCCAAAC
AGGGGAGCTTGAGGAGGAGAGGAAATCAGAATCAGGGTCAGAGAGTAAAT
TACAGGAGATTCGCTGTTAGAGCGTCTGCCAAAGATATTGCTTTTGACCA
GAGGTCCAGGGCCGCAATGCAGGCCGGCATCGATAAGCTTTCCGATGCTG
TTGGCCTTACTCTTGGTCCAAGAGGGAGAAATGTTGTTCTGGATGAATTT
GGGAGTCCGAAAGTGGTTAATGATGGAGTAACAATAGCCCGAGCTATTGA
GCTCGCAGATCCCATGGAAAATGCTGGTGCTGCTCTTATTAGGGAGGTTG
CAAGCAAAACCAATGACTCTGCTGGTGATGGAACAACAACTGCATCAGTT
CTTGCACGAGAAATAATTAAACTAGGACTCCTGAGTGTCACGTCTGGTGC
AAATCCTGTCTCCTTGAAGAGAGGGATTGATAAAACTGTACATGGGTTGG
TANAAAAGTTGGAAAAAANGGCCANGCCTATCGAAGGTCGTGATGATATC
AAAGCTGTTGCTACCATCTCTGCTGGGAATGATGACCTGATTGGGACAAT
GATCGCCCAATCCACTTGACAAGTTGGTCCTGATTGCGTCTTGTCCATCG
AATCATCATCATCATTTGAAAATAATGTTGAACTTGAGGAAGGAATGGAA
ATTACGGGGGTAATCTCTCCCATTTGGCCAACCCTGAGAATTCTTGGCGA
CTG
back to top