EY735859

Overview
NameEY735859
Unique NameEY735859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A2_MACFA (Eukaryotic initiation factor 4A-II OS=Macaca fascicularis GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.037e-64
Identity = 118/150 (78.67%), Postives = 133/150 (88.67%), Query Frame = 2 
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTLCDLY+TLTITQAVIF NT+RKVDWLTEKM   +FTVS++HGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  +D +ILRDIE +Y+T ++EMPMNVADLI
Sbjct:  259 EWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 408
[Close]
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A2_HUMAN (Eukaryotic initiation factor 4A-II OS=Homo sapiens GN=EIF4A2 PE=1 SV=2)

HSP 1 Score: 244.973 bits (624), Expect = 4.037e-64
Identity = 118/150 (78.67%), Postives = 133/150 (88.67%), Query Frame = 2 
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTLCDLY+TLTITQAVIF NT+RKVDWLTEKM   +FTVS++HGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  +D +ILRDIE +Y+T ++EMPMNVADLI
Sbjct:  258 EWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
[Close]
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A2_CHICK (Eukaryotic initiation factor 4A-II OS=Gallus gallus GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.037e-64
Identity = 118/150 (78.67%), Postives = 133/150 (88.67%), Query Frame = 2 
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTLCDLY+TLTITQAVIF NT+RKVDWLTEKM   +FTVS++HGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  +D +ILRDIE +Y+T ++EMPMNVADLI
Sbjct:  258 EWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
[Close]
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A2_BOVIN (Eukaryotic initiation factor 4A-II OS=Bos taurus GN=EIF4A2 PE=2 SV=1)

HSP 1 Score: 244.973 bits (624), Expect = 4.037e-64
Identity = 118/150 (78.67%), Postives = 133/150 (88.67%), Query Frame = 2 
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTLCDLY+TLTITQAVIF NT+RKVDWLTEKM   +FTVS++HGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  +D +ILRDIE +Y+T ++EMPMNVADLI
Sbjct:  258 EWKLDTLCDLYETLTITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDIETFYNTTVEEMPMNVADLI 407
[Close]
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_DICDI (Eukaryotic initiation factor 4A OS=Dictyostelium discoideum GN=tifA PE=3 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 5.273e-64
Identity = 119/150 (79.33%), Postives = 134/150 (89.33%), Query Frame = 2 
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            +WKF TLCD+YD+LTITQAVIFCNTK+KVD LTE+MR  NFTV+SMHGDM QKER+ I+  FRSG  RVLITTD+ ARG+DVQQVSLVINYDLP +RE YIHRIGRSGRFGRKGVAINFVKN DI+ILRDIEQ+YSTQIDEMP+N A +I
Sbjct:  256 DWKFGTLCDIYDSLTITQAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILARGIDVQQVSLVINYDLPIDRENYIHRIGRSGRFGRKGVAINFVKNSDIRILRDIEQFYSTQIDEMPVNFASII 405
[Close]
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_SCHPO (ATP-dependent RNA helicase eIF4A OS=Schizosaccharomyces pombe GN=tif1 PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 1.175e-63
Identity = 111/150 (74.00%), Postives = 136/150 (90.67%), Query Frame = 2 
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTLCDLY+T+T+TQAVIFCNT+RKVDWLTE++   +FTVSSMHGDM Q +RD +M EFR+G++R+LITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGV+INFV NDD++++R+IEQ+Y+T I+EMPMN+ADLI
Sbjct:  243 EWKLDTLCDLYETVTVTQAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVSINFVTNDDVRMMREIEQFYNTHIEEMPMNIADLI 392
[Close]
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_ASPOR (ATP-dependent RNA helicase eIF4A OS=Aspergillus oryzae GN=tif1 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.617e-63
Identity = 115/150 (76.67%), Postives = 134/150 (89.33%), Query Frame = 2 
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTL DLY+T+TITQAVIFCNT+RKVDWLT+K+   +FTVS+MHGDM Q +RD IM EFRSG++RVLI TD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  DD++++R+IEQ+YSTQI+EMPMNVADLI
Sbjct:  272 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 421
[Close]
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_ASPCL (ATP-dependent RNA helicase eIF4A OS=Aspergillus clavatus GN=tif1 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.617e-63
Identity = 115/150 (76.67%), Postives = 134/150 (89.33%), Query Frame = 2 
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTL DLY+T+TITQAVIFCNT+RKVDWLT+K+   +FTVS+MHGDM Q +RD IM EFRSG++RVLI TD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  DD++++R+IEQ+YSTQI+EMPMNVADLI
Sbjct:  249 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQSQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
[Close]
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_NEOFI (ATP-dependent RNA helicase eIF4A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=tif1 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.418e-63
Identity = 115/150 (76.67%), Postives = 134/150 (89.33%), Query Frame = 2 
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTL DLY+T+TITQAVIFCNT+RKVDWLT+K+   +FTVS+MHGDM Q +RD IM EFRSG++RVLI TD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  DD++++R+IEQ+YSTQI+EMPMNVADLI
Sbjct:  249 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398
[Close]
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_EMENI (ATP-dependent RNA helicase eIF4A OS=Emericella nidulans GN=tif1 PE=3 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 3.418e-63
Identity = 115/150 (76.67%), Postives = 134/150 (89.33%), Query Frame = 2 
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTL DLY+T+TITQAVIFCNT+RKVDWLT+K+   +FTVS+MHGDM Q +RD IM EFRSG++RVLI TD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  DD++++R+IEQ+YSTQI+EMPMNVADLI
Sbjct:  272 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 421
The following BLAST results are available for this feature:
BLAST of EY735859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A2_MACFA4.037e-6478.67Eukaryotic initiation factor 4A-II OS=Macaca fasci... [more]
IF4A2_HUMAN4.037e-6478.67Eukaryotic initiation factor 4A-II OS=Homo sapiens... [more]
IF4A2_CHICK4.037e-6478.67Eukaryotic initiation factor 4A-II OS=Gallus gallu... [more]
IF4A2_BOVIN4.037e-6478.67Eukaryotic initiation factor 4A-II OS=Bos taurus G... [more]
IF4A_DICDI5.273e-6479.33Eukaryotic initiation factor 4A OS=Dictyostelium d... [more]
IF4A_SCHPO1.175e-6374.00ATP-dependent RNA helicase eIF4A OS=Schizosaccharo... [more]
IF4A_ASPOR2.617e-6376.67ATP-dependent RNA helicase eIF4A OS=Aspergillus or... [more]
IF4A_ASPCL2.617e-6376.67ATP-dependent RNA helicase eIF4A OS=Aspergillus cl... [more]
IF4A_NEOFI3.418e-6376.67ATP-dependent RNA helicase eIF4A OS=Neosartorya fi... [more]
IF4A_EMENI3.418e-6376.67ATP-dependent RNA helicase eIF4A OS=Emericella nid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-A08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735859 ID=EY735859; Name=EY735859; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGAGTGGAAGTTTGATACACTCTGTGATCTTTATGATACCC
TTACGATTACACAAGCTGTTATTTTCTGCAACACGAAGCGTAAGGTGGAT
TGGCTAACAGAGAAGATGCGCGGCTATAACTTTACTGTCTCATCAATGCA
TGGAGACATGCCTCAGAAGGAAAGAGATGCAATTATGGGAGAATTTCGGT
CTGGGACAACCCGTGTGCTCATCACAACTGATGTTTGGGCACGAGGACTT
GATGTTCAGCAGGTTTCTTTGGTGATAAATTATGACCTTCCTAACAATCG
TGAGCTTTATATTCACCGGATTGGTCGTTCTGGACGTTTTGGACGCAAGG
GTGTAGCAATAAATTTTGTCAAAAACGATGATATCAAGATTCTTAGAGAT
ATCGAGCAATATTACAGTACCCAGATTGATGAAATGCCAATGAATGTTGC
TGATCTGATATAAGAGATGTTTGTGATCTCGTCTGCCAGAGTGGAGGTTA
TGGGATTGATCAATGANAGGTTGAAGACAATTGTGTGATTGACAGTTTCT
GCAAGTGTGACATTGTCTTTGTTTTTGTGAGGAGTTTGTATAATACAGGA
TGTNCTCATATNTTCTGTATGGTATTGATGACAAGAAAAGAGAAGAGAGT
AGGCATTAACATTTGTGATAAGATTCTAGTGATTGCCTTTTGCACCTTGA
ACTGATTTTAAGGGTGGCGATTTGTTCACTGTTGAATTCAAGTTATTTTA
CCCCTTTTTGAAAGATTGTAAACACTCTGGAAAAAANANANGNNNNNNGN
NNNNNNGNNNNNNNNNNNANAAAAAAAAGGGCGGCCCCCTAAAGGATC
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