EY735859

Overview
NameEY735859
Unique NameEY735859
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length848
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_PHANO (ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria nodorum GN=TIF1 PE=3 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 7.614e-63
Identity = 114/150 (76.00%), Postives = 134/150 (89.33%), Query Frame = 2
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            +WK DTL DLY+T+TITQAVIFCNT+RKVDWLT+K+   +FTVS+MHGDM Q +RD IM EFRSG++RVLI TD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  DD++++R+IEQ+YSTQI+EMPMNVADLI
Sbjct:  247 DWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 396          
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_COCIM (ATP-dependent RNA helicase eIF4A OS=Coccidioides immitis GN=TIF1 PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.299e-62
Identity = 114/150 (76.00%), Postives = 134/150 (89.33%), Query Frame = 2
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTL DLY+T+TITQAVIFCNT+RKVDWLT+K+   +FTVS+MHG+M Q +RD IM EFRSG++RVLI TD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  DD++++R+IEQ+YSTQI+EMPMNVADLI
Sbjct:  249 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLIARDFTVSAMHGEMEQNQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398          
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_BOTFB (ATP-dependent RNA helicase eIF4A OS=Botryotinia fuckeliana (strain B05.10) GN=tif1 PE=3 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.299e-62
Identity = 114/150 (76.00%), Postives = 134/150 (89.33%), Query Frame = 2
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            +WK DTL DLY+T+TITQAVIFCNT+RKVDWLT+K+   +FTVS+MHGDM Q +RD IM EFRSG++RVLI TD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  DD++++R+IEQ+YSTQI+EMPMNVADLI
Sbjct:  249 DWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVADLI 398          
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A1_PANTR (Eukaryotic initiation factor 4A-I OS=Pan troglodytes GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.299e-62
Identity = 116/150 (77.33%), Postives = 130/150 (86.67%), Query Frame = 2
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTLCDLY+TLTITQAVIF NT+RKVDWLTEKM   +FTVS+MHGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGV IN V  +D + LRDIE +Y+T I+EMP+NVADLI
Sbjct:  257 EWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVTINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406          
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A1_MACFA (Eukaryotic initiation factor 4A-I OS=Macaca fascicularis GN=EIF4A1 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 1.299e-62
Identity = 116/150 (77.33%), Postives = 130/150 (86.67%), Query Frame = 2
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK DTLCDLY+TLTITQAVIF NT+RKVDWLTEKM   +FT S+MHGDM QKERD IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAIN V  +D + LRDIE +Y+T I+EMP+NVADLI
Sbjct:  257 EWKLDTLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTASAMHGDMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDKRTLRDIETFYNTSIEEMPLNVADLI 406          
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: FAL1_PICST (ATP-dependent RNA helicase FAL1 OS=Pichia stipitis GN=FAL1 PE=3 SV=1)

HSP 1 Score: 239.58 bits (610), Expect = 1.696e-62
Identity = 111/150 (74.00%), Postives = 131/150 (87.33%), Query Frame = 2
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            +WKFDTLCDLYD LTITQAVIFCNTK KV+WLT++MR  NFTV SMHGDM Q ERD+IM +FR+G +RVLI+TDVWARG+DVQQVSLVINYDLP ++E YIHRIGRSGRFGRKGVAIN +  +D+  LRD E+YYST+I EMPMN+ D++
Sbjct:  250 DWKFDTLCDLYDNLTITQAVIFCNTKLKVNWLTDQMRKQNFTVVSMHGDMKQDERDSIMNDFRTGNSRVLISTDVWARGIDVQQVSLVINYDLPTDKENYIHRIGRSGRFGRKGVAINLITKEDVATLRDFEKYYSTKIREMPMNINDIM 399          
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: FAL1_CHAGB (ATP-dependent RNA helicase FAL1 OS=Chaetomium globosum GN=FAL1 PE=3 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.893e-62
Identity = 112/132 (84.85%), Postives = 125/132 (94.70%), Query Frame = 2
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIE 406
            +WKFDTLCDLYDTLTITQAVIFCNT+RKVDWLT+KMR  NFTVSSMHGDMPQKERD+IM +FR G +RVLI+TDVWARG+DVQQVSLVINYDLP+NRE YIHRIGRSGRFGRKGVAINFV ++D++ILRDIE
Sbjct:  251 DWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTDKMREANFTVSSMHGDMPQKERDSIMQDFRQGNSRVLISTDVWARGIDVQQVSLVINYDLPSNRENYIHRIGRSGRFGRKGVAINFVTSEDVRILRDIE 382          
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_SCLS1 (ATP-dependent RNA helicase eIF4A OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=tif1 PE=3 SV=1)

HSP 1 Score: 238.424 bits (607), Expect = 3.779e-62
Identity = 113/150 (75.33%), Postives = 134/150 (89.33%), Query Frame = 2
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            +WK DTL DLY+T+TITQAVIFCNT+RKVDWLT+K+   +FTVS+MHGDM Q +RD IM EFRSG++RVLI TD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  +D++++R+IEQ+YSTQI+EMPMNVADLI
Sbjct:  249 DWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQGQRDLIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTAEDVRMMREIEQFYSTQIEEMPMNVADLI 398          
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_ASPFU (ATP-dependent RNA helicase eIF4A OS=Aspergillus fumigatus GN=tif1 PE=3 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.436e-61
Identity = 112/147 (76.19%), Postives = 131/147 (89.12%), Query Frame = 2
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVA 451
            EWK DTL DLY+T+TITQAVIFCNT+RKVDWLT+K+   +FTVS+MHGDM Q +RD IM EFRSG++RVLI TD+ ARG+DVQQVSLVINYDLP NRE YIHRIGR GRFGRKGVAINFV  DD++++R+IEQ+YSTQI+EMPMNVA
Sbjct:  249 EWKLDTLSDLYETVTITQAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPANRENYIHRIGRGGRFGRKGVAINFVTADDVRMMREIEQFYSTQIEEMPMNVA 395          
BLAST of EY735859 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 4.178e-61
Identity = 109/150 (72.67%), Postives = 134/150 (89.33%), Query Frame = 2
Query:   11 EWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRGYNFTVSSMHGDMPQKERDAIMGEFRSGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKNDDIKILRDIEQYYSTQIDEMPMNVADLI 460
            EWK +TLCDLY+T+TITQAVIFC+T+RKVDWLT+++    FTVS+MHGDM Q+ER+ IM EFRSG++RVLITTD+ ARG+DVQQVSLVINYDLP+++E YIHRIGR GRFGRKGVAINFV N+D  +L +IE YY+TQ++EMP+NVADLI
Sbjct:  252 EWKLETLCDLYETVTITQAVIFCSTRRKVDWLTQQLHDRQFTVSAMHGDMKQEEREVIMKEFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPSSKENYIHRIGRGGRFGRKGVAINFVSNEDKNMLEEIETYYNTQVEEMPLNVADLI 401          
The following BLAST results are available for this feature:
BLAST of EY735859 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
IF4A_PHANO7.614e-6376.00ATP-dependent RNA helicase eIF4A OS=Phaeosphaeria ... [more]
IF4A_COCIM1.299e-6276.00ATP-dependent RNA helicase eIF4A OS=Coccidioides i... [more]
IF4A_BOTFB1.299e-6276.00ATP-dependent RNA helicase eIF4A OS=Botryotinia fu... [more]
IF4A1_PANTR1.299e-6277.33Eukaryotic initiation factor 4A-I OS=Pan troglodyt... [more]
IF4A1_MACFA1.299e-6277.33Eukaryotic initiation factor 4A-I OS=Macaca fascic... [more]
FAL1_PICST1.696e-6274.00ATP-dependent RNA helicase FAL1 OS=Pichia stipitis... [more]
FAL1_CHAGB2.893e-6284.85ATP-dependent RNA helicase FAL1 OS=Chaetomium glob... [more]
IF4A_SCLS13.779e-6275.33ATP-dependent RNA helicase eIF4A OS=Sclerotinia sc... [more]
IF4A_ASPFU1.436e-6176.19ATP-dependent RNA helicase eIF4A OS=Aspergillus fu... [more]
IF4A_CRYNE4.178e-6172.67ATP-dependent RNA helicase eIF4A OS=Cryptococcus n... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-007-A08-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735859 ID=EY735859; Name=EY735859; organism=Citrus sinensis; type=EST; length=848bp
CCACGCGTCCGAGTGGAAGTTTGATACACTCTGTGATCTTTATGATACCC
TTACGATTACACAAGCTGTTATTTTCTGCAACACGAAGCGTAAGGTGGAT
TGGCTAACAGAGAAGATGCGCGGCTATAACTTTACTGTCTCATCAATGCA
TGGAGACATGCCTCAGAAGGAAAGAGATGCAATTATGGGAGAATTTCGGT
CTGGGACAACCCGTGTGCTCATCACAACTGATGTTTGGGCACGAGGACTT
GATGTTCAGCAGGTTTCTTTGGTGATAAATTATGACCTTCCTAACAATCG
TGAGCTTTATATTCACCGGATTGGTCGTTCTGGACGTTTTGGACGCAAGG
GTGTAGCAATAAATTTTGTCAAAAACGATGATATCAAGATTCTTAGAGAT
ATCGAGCAATATTACAGTACCCAGATTGATGAAATGCCAATGAATGTTGC
TGATCTGATATAAGAGATGTTTGTGATCTCGTCTGCCAGAGTGGAGGTTA
TGGGATTGATCAATGANAGGTTGAAGACAATTGTGTGATTGACAGTTTCT
GCAAGTGTGACATTGTCTTTGTTTTTGTGAGGAGTTTGTATAATACAGGA
TGTNCTCATATNTTCTGTATGGTATTGATGACAAGAAAAGAGAAGAGAGT
AGGCATTAACATTTGTGATAAGATTCTAGTGATTGCCTTTTGCACCTTGA
ACTGATTTTAAGGGTGGCGATTTGTTCACTGTTGAATTCAAGTTATTTTA
CCCCTTTTTGAAAGATTGTAAACACTCTGGAAAAAANANANGNNNNNNGN
NNNNNNGNNNNNNNNNNNANAAAAAAAAGGGCGGCCCCCTAAAGGATC
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