EY735765

Overview
NameEY735765
Unique NameEY735765
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735765 vs. ExPASy Swiss-Prot
Match: NFYA2_ARATH (Nuclear transcription factor Y subunit A-2 OS=Arabidopsis thaliana GN=NFYA2 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.144e-18
Identity = 50/108 (46.30%), Postives = 70/108 (64.81%), Query Frame = 1
Query:  325 VPLPTDAVEEPVFVNAKQYHGILRRRQSRAKAES--ENKVLKSR--KPYLHESRHLHALRRARGCGGRFLNSKKNENQQKGMASDDKSQSNLNLNSDKNEIASSDRQS 636
            +PL  +  +  ++VN+KQYHGI+RRRQSRAKA +  + K L SR  KPY+H SRHLHALRR RG GGRFLN+ K++N +    +  K   ++ + S      S+ + S
Sbjct:  127 LPLNMETEDSTIYVNSKQYHGIIRRRQSRAKAAAVLDQKKLSSRCRKPYMHHSRHLHALRRPRGSGGRFLNT-KSQNLENSGTNAKKGDGSMQIQSQPKPQQSNSQNS 233          
BLAST of EY735765 vs. ExPASy Swiss-Prot
Match: NFYA_RAT (Nuclear transcription factor Y subunit alpha OS=Rattus norvegicus GN=Nfya PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 1
Query:  325 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNEN 543
            +PLP   +  EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R RG GGRF + K+ ++
Sbjct:  246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDS 320          
BLAST of EY735765 vs. ExPASy Swiss-Prot
Match: NFYA_MOUSE (Nuclear transcription factor Y subunit alpha OS=Mus musculus GN=Nfya PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 1
Query:  325 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNEN 543
            +PLP   +  EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R RG GGRF + K+ ++
Sbjct:  251 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDS 325          
BLAST of EY735765 vs. ExPASy Swiss-Prot
Match: NFYA_HUMAN (Nuclear transcription factor Y subunit alpha OS=Homo sapiens GN=NFYA PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 1
Query:  325 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNEN 543
            +PLP   +  EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R RG GGRF + K+ ++
Sbjct:  252 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDS 326          
BLAST of EY735765 vs. ExPASy Swiss-Prot
Match: NFYA_BOVIN (Nuclear transcription factor Y subunit alpha OS=Bos taurus GN=NFYA PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.265e-17
Identity = 43/75 (57.33%), Postives = 57/75 (76.00%), Query Frame = 1
Query:  325 VPLPTDAV--EEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNEN 543
            +PLP   +  EEP++VNAKQYH IL+RRQ+RAK E+E K+ K R+ YLHESRH HA+ R RG GGRF + K+ ++
Sbjct:  246 IPLPGAEMLEEEPLYVNAKQYHRILKRRQARAKLEAEGKIPKERRKYLHESRHRHAMARKRGEGGRFFSPKEKDS 320          
BLAST of EY735765 vs. ExPASy Swiss-Prot
Match: HAP2_YEAST (Transcriptional activator HAP2 OS=Saccharomyces cerevisiae GN=HAP2 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.818e-17
Identity = 46/87 (52.87%), Postives = 59/87 (67.82%), Query Frame = 1
Query:  331 LPTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLNSK--KNENQQKGMASDDKSQSN 585
            L T   E+P +VNAKQY+ IL+RR +RAK E + ++ + RKPYLHESRH HA+RR RG GGRFL +   K    +K  ASDD   S+
Sbjct:  152 LGTAIAEQPFYVNAKQYYRILKRRYARAKLEEKLRISRERKPYLHESRHKHAMRRPRGEGGRFLTAAEIKAMKSKKSGASDDPDDSH 238          
BLAST of EY735765 vs. ExPASy Swiss-Prot
Match: HAP2_KLULA (Transcriptional activator HAP2 OS=Kluyveromyces lactis GN=HAP2 PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.399e-16
Identity = 41/89 (46.07%), Postives = 61/89 (68.54%), Query Frame = 1
Query:  334 PTDAVEEPVFVNAKQYHGILRRRQSRAKAESENKVLKSRKPYLHESRHLHALRRARGCGGRFLN----SKKNENQQKGMASDDKSQSNL 588
            P++ +E+P +VNAKQY+ IL+RR +RAK E   K+ + R+PYLHESRH HA+RR RG GGRFL     ++    +++G  +D   Q ++
Sbjct:  179 PSEPLEQPFYVNAKQYYRILKRRYARAKLEENLKISRERRPYLHESRHKHAMRRPRGQGGRFLTAAEMAEMKRKEEEGTDNDSFLQEHV 267          
BLAST of EY735765 vs. ExPASy Swiss-Prot
Match: HAP2_SCHPO (Transcriptional activator hap2 OS=Schizosaccharomyces pombe GN=hap2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 6.497e-14
Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 1
Query:  352 EPVFVNAKQYHGILRRRQSRAKAESENK-VLKSRKPYLHESRHLHALRRARGCGGRFLNSKKNENQQK----------GMASDDKSQSNLN 591
            E ++VNAKQYH IL+RR++RAK E   + V  ++KPYLHESRH HA+RR RG GGRFL + K    +           G   DD + +N N
Sbjct:    8 EGLYVNAKQYHRILKRREARAKLEERLRGVQTTKKPYLHESRHKHAMRRPRGPGGRFLTADKVSKLRAQEAAEAAANGGSTGDDVNATNAN 98          
The following BLAST results are available for this feature:
BLAST of EY735765 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
NFYA2_ARATH1.144e-1846.30Nuclear transcription factor Y subunit A-2 OS=Arab... [more]
NFYA_RAT1.265e-1757.33Nuclear transcription factor Y subunit alpha OS=Ra... [more]
NFYA_MOUSE1.265e-1757.33Nuclear transcription factor Y subunit alpha OS=Mu... [more]
NFYA_HUMAN1.265e-1757.33Nuclear transcription factor Y subunit alpha OS=Ho... [more]
NFYA_BOVIN1.265e-1757.33Nuclear transcription factor Y subunit alpha OS=Bo... [more]
HAP2_YEAST2.818e-1752.87Transcriptional activator HAP2 OS=Saccharomyces ce... [more]
HAP2_KLULA1.399e-1646.07Transcriptional activator HAP2 OS=Kluyveromyces la... [more]
HAP2_SCHPO6.497e-1447.25Transcriptional activator hap2 OS=Schizosaccharomy... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-G06-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735765 ID=EY735765; Name=EY735765; organism=Citrus sinensis; type=EST; length=843bp
CACGCGTCCGGCCTCATGACTTCCTCTGTGCATGATATGTCCGATAACAG
TGACGCTGATGAGCAGCGGAAGCATCCAGAATCCCAGTTACAGTCCTCAA
CACCTGCAATGGGAATGTCTCATCCAAGCATCACAACTCCCAATGTTCAA
TATGCAACGCATCAAGTCGGGGCAGGCCATGCTATGGCACCAGCAGCTTA
CCCCTATCCAGATCCGTACTACAGAAGCATATTTGCTCCCTATGATGCAC
AACCATATCCTCCACAGCCATATGGTGGACAACCAATGGTCCATCTTCAG
TTGATGGGAATTCAGCAAGCTGGAGTTCCTTTGCCAACAGATGCAGTTGA
GGAGCCCGTGTTTGTCAATGCCAAACAATATCATGGCATCTTGCGACGAC
GACAATCTCGTGCAAAAGCTGAATCTGAAAACAAAGTTTTAAAGTCTCGA
AAGCCATACTTGCATGAATCTCGACATCTGCATGCATTAAGAAGAGCTAG
GGGATGTGGGGGACGGTTTCTCAACTCAAAGAAAAATGAGAACCAACAGA
AGGGGATGGCATCAGATGACAAATCACAGTCCAATCTCAATCTCAACTCA
GATAAAAACGAAATTGCGTCCTCAGATAGGCAGTCCTAATTTTTTATGTA
TGAATAAATAAGGTCAGAGGTCTCTTAATTAGGTTCCCTTACCAGCTCAA
ACAGTCTCAGTATTTGGTATTTGCTTGATTCTATCTCAGTACTCAGTAAT
GTGTGTAGATATTCTANTANTANTANGCTGTAGGAAGTTACAAAGATGAA
GCAGGGCAGAATTATCGAAGTGCAGTTATATTATTGCCTTTGG
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