EY735761

Overview
NameEY735761
Unique NameEY735761
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length847
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY735761 vs. ExPASy Swiss-Prot
Match: MSK2_MEDSA (Glycogen synthase kinase-3 homolog MsK-2 OS=Medicago sativa GN=MSK-2 PE=2 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 2.015e-23
Identity = 58/101 (57.43%), Postives = 63/101 (62.38%), Query Frame = 3 
Query:  351 DLQVNPHTHQLKICDFGSAKMLVCSLFGKKFWEFLKYYC*CLENHDC*DSFSNLQVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAXLLLG 653
            +L VNPHTHQLK+CDFGSAK+LV                                  GEPNISYICSRYYRAPELIFGATEYT+AID+WS GCVL  LLLG
Sbjct:  204 NLLVNPHTHQLKLCDFGSAKVLV---------------------------------KGEPNISYICSRYYRAPELIFGATEYTSAIDIWSAGCVLGELLLG 271
[Close]
BLAST of EY735761 vs. ExPASy Swiss-Prot
Match: KSG2_ARATH (Shaggy-related protein kinase beta OS=Arabidopsis thaliana GN=ASK2 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 1.306e-22
Identity = 56/101 (55.45%), Postives = 63/101 (62.38%), Query Frame = 3 
Query:  351 DLQVNPHTHQLKICDFGSAKMLVCSLFGKKFWEFLKYYC*CLENHDC*DSFSNLQVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAXLLLG 653
            +L VN  TH++KICDFGSAKML+                                 PGEPNISYICSRYYRAPELIFGATEYT+AIDMWS+GCV+A L LG
Sbjct:  232 NLLVNNVTHEVKICDFGSAKMLI---------------------------------PGEPNISYICSRYYRAPELIFGATEYTSAIDMWSVGCVMAELFLG 299
[Close]
BLAST of EY735761 vs. ExPASy Swiss-Prot
Match: KSG9_ARATH (Shaggy-related protein kinase iota OS=Arabidopsis thaliana GN=ASK9 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 3.217e-21
Identity = 55/101 (54.46%), Postives = 62/101 (61.39%), Query Frame = 3 
Query:  351 DLQVNPHTHQLKICDFGSAKMLVCSLFGKKFWEFLKYYC*CLENHDC*DSFSNLQVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAXLLLG 653
            +L V+P THQ+K+CDFGSAK+LV                                  GEPNISYICSRYYRAPELIFGATEYT +ID+WS GCVLA LLLG
Sbjct:  200 NLLVDPLTHQVKLCDFGSAKVLV---------------------------------KGEPNISYICSRYYRAPELIFGATEYTASIDIWSAGCVLAELLLG 267
[Close]
BLAST of EY735761 vs. ExPASy Swiss-Prot
Match: KSG7_ARATH (Shaggy-related protein kinase eta OS=Arabidopsis thaliana GN=ASK7 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.597e-20
Identity = 55/101 (54.46%), Postives = 61/101 (60.40%), Query Frame = 3 
Query:  351 DLQVNPHTHQLKICDFGSAKMLVCSLFGKKFWEFLKYYC*CLENHDC*DSFSNLQVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAXLLLG 653
            +L V+P THQ+KICDFGSAK LV                                  GE NISYICSR+YRAPELIFGATEYTT+ID+WS GCVLA LLLG
Sbjct:  170 NLLVDPLTHQVKICDFGSAKQLV---------------------------------KGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLG 237
[Close]
BLAST of EY735761 vs. ExPASy Swiss-Prot
Match: KSG6_ARATH (Shaggy-related protein kinase zeta OS=Arabidopsis thaliana GN=ASK6 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 3.557e-20
Identity = 54/101 (53.47%), Postives = 61/101 (60.40%), Query Frame = 3 
Query:  351 DLQVNPHTHQLKICDFGSAKMLVCSLFGKKFWEFLKYYC*CLENHDC*DSFSNLQVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAXLLLG 653
            +L V+P THQ K+CDFGSAK+LV                                  GE NISYICSRYYRAPELIFGATEYT++ID+WS GCVLA LLLG
Sbjct:  202 NLLVDPLTHQCKLCDFGSAKVLV---------------------------------KGEANISYICSRYYRAPELIFGATEYTSSIDIWSAGCVLAELLLG 269
[Close]
BLAST of EY735761 vs. ExPASy Swiss-Prot
Match: GSK3B_RAT (Glycogen synthase kinase-3 beta OS=Rattus norvegicus GN=Gsk3b PE=1 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.305e-19
Identity = 52/101 (51.49%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  351 DLQVNPHTHQLKICDFGSAKMLVCSLFGKKFWEFLKYYC*CLENHDC*DSFSNLQVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAXLLLG 653
            +L ++P T  LK+CDFGSAK LV                                  GEPN+SYICSRYYRAPELIFGAT+YT++IDMWS GCVLA LLLG
Sbjct:  186 NLLLDPDTAVLKLCDFGSAKQLV---------------------------------RGEPNVSYICSRYYRAPELIFGATDYTSSIDMWSAGCVLAELLLG 253
[Close]
BLAST of EY735761 vs. ExPASy Swiss-Prot
Match: GSK3A_RAT (Glycogen synthase kinase-3 alpha OS=Rattus norvegicus GN=Gsk3a PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.011e-19
Identity = 52/101 (51.49%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  351 DLQVNPHTHQLKICDFGSAKMLVCSLFGKKFWEFLKYYC*CLENHDC*DSFSNLQVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAXLLLG 653
            +L V+P T  LK+CDFGSAK LV                                  GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLA LLLG
Sbjct:  249 NLLVDPDTAVLKLCDFGSAKQLV---------------------------------RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 316
[Close]
BLAST of EY735761 vs. ExPASy Swiss-Prot
Match: GSK3A_MOUSE (Glycogen synthase kinase-3 alpha OS=Mus musculus GN=Gsk3a PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.011e-19
Identity = 52/101 (51.49%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  351 DLQVNPHTHQLKICDFGSAKMLVCSLFGKKFWEFLKYYC*CLENHDC*DSFSNLQVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAXLLLG 653
            +L V+P T  LK+CDFGSAK LV                                  GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLA LLLG
Sbjct:  249 NLLVDPDTAVLKLCDFGSAKQLV---------------------------------RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 316
[Close]
BLAST of EY735761 vs. ExPASy Swiss-Prot
Match: GSK3A_HUMAN (Glycogen synthase kinase-3 alpha OS=Homo sapiens GN=GSK3A PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.011e-19
Identity = 52/101 (51.49%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  351 DLQVNPHTHQLKICDFGSAKMLVCSLFGKKFWEFLKYYC*CLENHDC*DSFSNLQVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAXLLLG 653
            +L V+P T  LK+CDFGSAK LV                                  GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLA LLLG
Sbjct:  249 NLLVDPDTAVLKLCDFGSAKQLV---------------------------------RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 316
[Close]
BLAST of EY735761 vs. ExPASy Swiss-Prot
Match: GSK3B_SPECI (Glycogen synthase kinase-3 beta OS=Spermophilus citellus GN=GSK3B PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.708e-19
Identity = 51/101 (50.50%), Postives = 60/101 (59.41%), Query Frame = 3 
Query:  351 DLQVNPHTHQLKICDFGSAKMLVCSLFGKKFWEFLKYYC*CLENHDC*DSFSNLQVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSIGCVLAXLLLG 653
            +L ++P T  LK+CDFGSAK LV                                  GEPN+SYICSRYYRAPELIFGAT+YT++ID+WS GCVLA LLLG
Sbjct:  186 NLLLDPDTAVLKLCDFGSAKQLV---------------------------------RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG 253
The following BLAST results are available for this feature:
BLAST of EY735761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MSK2_MEDSA2.015e-2357.43Glycogen synthase kinase-3 homolog MsK-2 OS=Medica... [more]
KSG2_ARATH1.306e-2255.45Shaggy-related protein kinase beta OS=Arabidopsis ... [more]
KSG9_ARATH3.217e-2154.46Shaggy-related protein kinase iota OS=Arabidopsis ... [more]
KSG7_ARATH1.597e-2054.46Shaggy-related protein kinase eta OS=Arabidopsis t... [more]
KSG6_ARATH3.557e-2053.47Shaggy-related protein kinase zeta OS=Arabidopsis ... [more]
GSK3B_RAT2.305e-1951.49Glycogen synthase kinase-3 beta OS=Rattus norvegic... [more]
GSK3A_RAT3.011e-1951.49Glycogen synthase kinase-3 alpha OS=Rattus norvegi... [more]
GSK3A_MOUSE3.011e-1951.49Glycogen synthase kinase-3 alpha OS=Mus musculus G... [more]
GSK3A_HUMAN3.011e-1951.49Glycogen synthase kinase-3 alpha OS=Homo sapiens G... [more]
GSK3B_SPECI6.708e-1950.50Glycogen synthase kinase-3 beta OS=Spermophilus ci... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-G02-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735761 ID=EY735761; Name=EY735761; organism=Citrus sinensis; type=EST; length=847bp
CACGCGTCCGCTTAATTGGTCTGAGCTCTGTTGTAGACTAATTAGTTTTC
TGTTAGTGAGAAAAATTTGTTTCGATGAGCAGATGTAAGGTTTTGATAGT
AAGCTCCTTGGCACTTATTGCTAGGTATGCACACAAGACCGCCTTTCTAA
AAAAATAAAAAATTAAAATGACGTGGGTGTAAAATTTCTTTAAGGTTTTA
CTCGAAATTTAATAGTGTTGTTATAGGTTTTTGCTTGTGAAAGTTTGAGA
TGATGATCTAGATATGCTTCATTATCATGCTATCTTTCTTAAAATTTTTG
TTTGGTTATTGAATATAGTATCAAAAATATCTAGTTTGAATTCGTAATGT
GATTTGCAGGTCAATCCCCATACACACCAGTTAAAGATATGTGACTTTGG
AAGTGCAAAGATGTTGGTATGTTCTTTATTTGGGAAAAAGTTTTGGGAAT
TTTTGAAGTACTATTGCTAATGCTTGGAAAATCATGACTGCTGAGATTCA
TTCTCAAATCTCCAGGTGCCAGGTGAACCCAACATATCGTATATCTGCTC
AAGATATTACAGGGCCCCGGAACTTATATTTGGGGCTACAGAATACACAA
CTGCCATTGATATGTGGTCCATTGGATGTGTCTTGGCTGANCTTCTTCTT
GGGACACGTTGGTGTGTGCTTTTTATTTTCATCTGGAATCTGTTTGAATG
TTGGTGTCAAATTTCACCCGCCCTTGATAATTTGTCAGGGGGGGCCTATT
GGGAGAGGTTCCAGGAAGGCGATGAGCTTAACCTGGGGGTTCAAGAATTC
GATGAGGTGGTCGGAAGGGCCCGAGGTGGAGAGGGGGGTGCGGGGCG
back to top