EY735710

Overview
NameEY735710
Unique NameEY735710
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length482
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y938_PSYA2 (UPF0082 protein Psyc_0938 OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=Psyc_0938 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.380e-12
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK RQDA KGK+FTK IRE+   A+QG  +P  NP
Sbjct:    1 MAGHSKWANIKHRKARQDAVKGKVFTKIIREIVSAAKQGDPDPDKNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y710_MANSM (UPF0082 protein MS0710 OS=Mannheimia succiniciproducens (strain MBEL55E) GN=MS0710 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.380e-12
Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK  QDA++GKIFTK IREL   A+ GG + GSNP
Sbjct:    1 MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDAGSNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1803_ACTSZ (UPF0082 protein Asuc_1803 OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=Asuc_1803 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.380e-12
Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK  QDA++GKIFTK IREL   A+ GG + GSNP
Sbjct:    1 MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKIGGGDAGSNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1479_PSYCK (UPF0082 protein Pcryo_1479 OS=Psychrobacter cryohalolentis (strain K5) GN=Pcryo_1479 PE=3 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.380e-12
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK RQDA KGK+FTK IRE+   A+QG  +P  NP
Sbjct:    1 MAGHSKWANIKHRKARQDAVKGKVFTKIIREIVSAAKQGDPDPDKNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1487_ERWT9 (UPF0082 protein ETA_14870 OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ETA_14870 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.414e-12
Identity = 33/47 (70.21%), Postives = 36/47 (76.60%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWAN  HRK  QDAK+GKIFTK IREL   A+ GG + GSNP
Sbjct:    1 MAGHSKWANTKHRKAAQDAKRGKIFTKVIRELVTAAKLGGGDAGSNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y508_HAES1 (UPF0082 protein HS_0508 OS=Haemophilus somnus (strain 129Pt) GN=HS_0508 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.529e-12
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK  QDA++GKIFTK IREL   A+ GG + G+NP
Sbjct:    1 MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDVGANP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y3123_CHRVO (UPF0082 protein CV_3123 OS=Chromobacterium violaceum GN=CV_3123 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.529e-12
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK RQDAK+GKIFT+ I+E+T  A+ GG +   NP
Sbjct:    1 MAGHSKWANIQHRKGRQDAKRGKIFTRLIKEITVAAKMGGGDANMNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y2075_RHOFD (UPF0082 protein Rfer_2075 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=Rfer_2075 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.529e-12
Identity = 31/47 (65.96%), Postives = 38/47 (80.85%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK RQD K+GK++T+ IRE+T  AR GG + G+NP
Sbjct:    1 MAGHSKWANIQHRKGRQDEKRGKVWTRIIREITVAARAGGADLGTNP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1763_HAES2 (UPF0082 protein HSM_1763 OS=Haemophilus somnus (strain 2336) GN=HSM_1763 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.529e-12
Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWANI HRK  QDA++GKIFTK IREL   A+ GG + G+NP
Sbjct:    1 MAGHSKWANIKHRKAAQDAQRGKIFTKLIRELVTAAKLGGGDVGANP 47          
BLAST of EY735710 vs. ExPASy Swiss-Prot
Match: Y1596_EDWI9 (UPF0082 protein NT01EI_1596 OS=Edwardsiella ictaluri (strain 93-146) GN=NT01EI_1596 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 7.529e-12
Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 2
Query:  254 MAGHSKWANIDHRKKRQDAKKGKIFTKWIRELTRXARQGGREPGSNP 394
            MAGHSKWAN  HRK  QDAK+GKIFTK IREL   A+ GG +P +NP
Sbjct:    1 MAGHSKWANTKHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANP 47          
The following BLAST results are available for this feature:
BLAST of EY735710 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 133
Match NameE-valueIdentityDescription
Y938_PSYA23.380e-1268.09UPF0082 protein Psyc_0938 OS=Psychrobacter arcticu... [more]
Y710_MANSM3.380e-1270.21UPF0082 protein MS0710 OS=Mannheimia succiniciprod... [more]
Y1803_ACTSZ3.380e-1270.21UPF0082 protein Asuc_1803 OS=Actinobacillus succin... [more]
Y1479_PSYCK3.380e-1268.09UPF0082 protein Pcryo_1479 OS=Psychrobacter cryoha... [more]
Y1487_ERWT94.414e-1270.21UPF0082 protein ETA_14870 OS=Erwinia tasmaniensis ... [more]
Y508_HAES17.529e-1268.09UPF0082 protein HS_0508 OS=Haemophilus somnus (str... [more]
Y3123_CHRVO7.529e-1265.96UPF0082 protein CV_3123 OS=Chromobacterium violace... [more]
Y2075_RHOFD7.529e-1265.96UPF0082 protein Rfer_2075 OS=Rhodoferax ferrireduc... [more]
Y1763_HAES27.529e-1268.09UPF0082 protein HSM_1763 OS=Haemophilus somnus (st... [more]
Y1596_EDWI97.529e-1268.09UPF0082 protein NT01EI_1596 OS=Edwardsiella ictalu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-004-A05-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735710 ID=EY735710; Name=EY735710; organism=Citrus sinensis; type=EST; length=482bp
CAAAGTGCTGCCGACGTCATGACGCAAGCACCGGGTGTGGTGGATGCCAA
TGCACTGCGCAAGCTGCATATCCGTCTGAGCGAGACACGAAAGGCTGAGT
AAGGCCGCAGCGTGAAAGCGCGATAAGGTTTTACATTGTCAGCTAAGGGC
GCATCTTCGGATGCGCCTTTGCGTGACAAGGGCTGCACGTTAGAGAGGGA
ANTCCCGCCTGGGGCGGGATCGACAGGTTTCTACAGAATTTCAGAGTTGT
GTTATGGCTGGCCATTCCAAGTGGGCGAACATCGACCACCGCAAAAAGCG
TCAGGATGCCAAGAAAGGCAAGATCTTCACCAAGTGGATTCGCGAGCTGA
CCCGCNCTGCGCGCCAAGGTGGGCGTGAACCGGGTTCCAACCCCGCGTCT
GCGCCTGGACCCTGGAACAGGGCCTCGGCCGCCACATGAACCCCCAAATC
ATCGAACGGCCCGTGGCCCGTGTTGCCGGGGG
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