EY735706
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY735706 vs. ExPASy Swiss-Prot
Match: RS4E_PYRHO (30S ribosomal protein S4e OS=Pyrococcus horikoshii GN=rps4e PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.969e-14 Identity = 41/101 (40.59%), Postives = 58/101 (57.43%), Query Frame = 1 Query: 130 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMGM----QSSAHILLLP 420 +G K+HLKRL AP W +++ +A +P GPH R +PL+ I+R+ L YA T RE IL + LVD KVR D +P G M + ++ H +LP Sbjct: 4 KGPKRHLKRLAAPSSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGKVRKDYKFPVGIMDVVSIPETGEHYRVLP 104
BLAST of EY735706 vs. ExPASy Swiss-Prot
Match: RS4E_META3 (30S ribosomal protein S4e OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rps4e PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.189e-13 Identity = 38/89 (42.70%), Postives = 52/89 (58.43%), Query Frame = 1 Query: 130 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMGMQS 396 +G +KHLKRL APK+W + + + +PS+GPH LPL+L+LR+ L YA RE ++ VLVD R D YP G M + S Sbjct: 4 KGPRKHLKRLPAPKNWQISRKTNKYTTRPSAGPHAMGSSLPLLLVLRDLLGYADNAREAKKVIKMGKVLVDGVKRKDHRYPTGLMDVIS 92
BLAST of EY735706 vs. ExPASy Swiss-Prot
Match: RS4E_HYPBU (30S ribosomal protein S4e OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps4e PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.553e-13 Identity = 38/88 (43.18%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 124 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 384 MAR G ++HLK L APK W + + G F KPS GPH +PL++++R+ L YA T RE ++ + H +D +VR + YP GFM Sbjct: 1 MARMGGRRHLKTLAAPKFWPVRQRAGIFTVKPSPGPHPIERSIPLLILVRDVLGYAKTAREARKLIAEGHFKIDGRVRRNYKYPVGFM 88
BLAST of EY735706 vs. ExPASy Swiss-Prot
Match: RS4E_PYRFU (30S ribosomal protein S4e OS=Pyrococcus furiosus GN=rps4e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 1 Query: 130 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMGM----QSSAHILLLP 420 +G K+HLKRL AP W +++ +A +P GPH R +PL+ I+R+ L YA T RE IL + LVD +VR D +P G M + ++ H +LP Sbjct: 4 KGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLP 104
BLAST of EY735706 vs. ExPASy Swiss-Prot
Match: RS4E_PYRAB (30S ribosomal protein S4e OS=Pyrococcus abyssi GN=rps4e PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 2.028e-13 Identity = 40/101 (39.60%), Postives = 58/101 (57.43%), Query Frame = 1 Query: 130 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMGM----QSSAHILLLP 420 +G K+HLKRL AP W +++ +A +P GPH R +PL+ I+R+ L YA T RE IL + LVD +VR D +P G M + ++ H +LP Sbjct: 4 KGPKRHLKRLAAPTSWYIERKAYKWAVRPRPGPHNMRTSIPLLYIVRDYLGYAKTAREARKILNEGKFLVDGRVRKDYKFPVGIMDVVSIPETGEHYRVLP 104
BLAST of EY735706 vs. ExPASy Swiss-Prot
Match: RS4E_STAMF (30S ribosomal protein S4e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rps4e PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.648e-13 Identity = 41/88 (46.59%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 124 MAR-GLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFM 384 MAR G KKHLK L APK W + + +A KPS GPH C PL++I+R+ L YA T RE ++ + H VD +VR + YP G M Sbjct: 1 MARMGGKKHLKALVAPKFWPILRKEYKWAVKPSPGPHPIERCFPLLIIVRDILGYAKTAREARKLISEGHFKVDGRVRKNYKYPVGLM 88
BLAST of EY735706 vs. ExPASy Swiss-Prot
Match: RS4E_METM7 (30S ribosomal protein S4e OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=rps4e PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 130 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMGMQS 396 +G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG M + S Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLS 92
BLAST of EY735706 vs. ExPASy Swiss-Prot
Match: RS4E_METM6 (30S ribosomal protein S4e OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=rps4e PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 130 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMGMQS 396 +G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG M + S Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDILKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLS 92
BLAST of EY735706 vs. ExPASy Swiss-Prot
Match: RS4E_METM5 (30S ribosomal protein S4e OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rps4e PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.459e-13 Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 130 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMGMQS 396 +G +KHLKRL AP +W L + AF +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG M + S Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKAFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLS 92
BLAST of EY735706 vs. ExPASy Swiss-Prot
Match: RS4E_METMP (30S ribosomal protein S4e OS=Methanococcus maripaludis GN=rps4e PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 1.006e-12 Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 1 Query: 130 RGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDAKVRTDKTYPAGFMGMQS 396 +G +KHLKRL AP +W L + F +PS GPH + LPL+L++R+ LKYA RE I+ +L+D R + +PAG M + S Sbjct: 4 KGPRKHLKRLAAPANWQLPRKVKTFTVRPSPGPHSMDKSLPLLLVVRDVLKYADNAREAKKIIQTGKILIDGLKRKEYKHPAGLMDVLS 92 The following BLAST results are available for this feature:
BLAST of EY735706 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >EY735706 ID=EY735706; Name=EY735706; organism=Citrus sinensis; type=EST; length=880bpback to top |