EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB2_STRCO (1,4-alpha-glucan-branching enzyme 2 OS=Streptomyces coelicolor GN=glgB2 PE=3 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.245e-14
Identity = 57/204 (27.94%), Postives = 100/204 (49.02%), Query Frame = 2
Query:   11 KRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQY---VDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEISEHSPEPTNWLAHRAS 610
            +R  H  WGT  F +   +V +FL++N  +W  E+ IDG +  +++SM+Y    ++  +G  E   NQY    D  A+ +L   N  ++   P ++TIAE++T + G+  PT  GGLGF    N+      L ++ + P H  +   ++  ++V           YA + N  +   H   E++ G+ +  S  P +W   RA+
Sbjct:  379 RRAEHPDWGTYTFDFARTEVRNFLVANAVYWCEEFHIDGLRVDAVASMLYL--DYSRDSGQWEP--NQYGGREDLAAMAFLQEMNATVYRRCPGVVTIAEESTAWGGVTRPTDTGGLGFGLKWNMGWMHDSLEYVAHEPVHRRYHHHEMTFSMV-----------YAYSENYVLPISHD--EVVHGKQALVSKMPGDWWQRRAN 565          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SYNY3 (1,4-alpha-glucan-branching enzyme OS=Synechocystis sp. (strain PCC 6803) GN=glgB PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.462e-14
Identity = 51/177 (28.81%), Postives = 93/177 (52.54%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQYS-DKMIMYAENHNQCISG 526
            P++G HK WGT +F Y   +V +FL++N  +W  +Y IDG +  +++SM+Y    +    G  E   N+Y  +   +A  +L   N ++++  P I++IAE++T +P +  PT  GGLGF+   N+      L +    P   W      +++  +  Y+  +  M A +H++ + G
Sbjct:  390 PRKGEHKEWGTLIFNYGRNEVRNFLVANALFWFDKYHIDGMRVDAVASMLYL--DYCREEG--EWVANEYGGRENLEAADFLRQVNSVVYSYFPGILSIAEESTSWPMVSWPTYVGGLGFNLKWNMGWMHDMLDYFSMDP---WFRQFHQNSITFSMWYNHSENYMLALSHDEVVHG 559          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MYCPA (1,4-alpha-glucan-branching enzyme OS=Mycobacterium paratuberculosis GN=glgB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.462e-14
Identity = 44/137 (32.12%), Postives = 70/137 (51.09%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            PKRG    WGT +F +   +V +FL++N  +W+ E+ IDG +  +++SM+Y         G          + +A+ +L   N   H   P I+TIAE++T +PG+  PT  GGLGF    N+      L ++   P
Sbjct:  368 PKRGEQLDWGTYVFDFGRREVRNFLVANALYWLQEFHIDGLRVDAVASMLYLDYSRPE-GGWTPNIYGGRENLEAVQFLQEMNATAHKSAPGIVTIAEESTSWPGVTRPTNLGGLGFSMKWNMGWMHDTLDYISRDP 503          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_HAEI8 (1,4-alpha-glucan-branching enzyme OS=Haemophilus influenzae (strain 86-028NP) GN=glgB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.462e-14
Identity = 50/180 (27.78%), Postives = 99/180 (55.00%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHS 535
            P+ G+H+ W T ++ Y   +V +FL SN  +W+  + +DG +  +++SMIY     A    + E   NQY  +   +A+ +L   N  +H+     I+IAE++T + G+  P+  GGLGF++  N+      L++++  P + ++  +K+   +V   QYS+  ++   +H++ + G +S
Sbjct:  362 PREGYHQDWNTLIYNYGRNEVKNFLSSNALYWLERFGVDGIRMDAVASMIYRDYSRA----EGEWIPNQYGGRENLEAIEFLKHTNWKIHSEMAGAISIAEESTSFAGVTHPSEDGGLGFNFKWNMGWMNDTLAYMKLDPIYRQYHHNKMTFGMV--YQYSENFVL-PLSHDEVVHGKYS 534          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ANASP (1,4-alpha-glucan-branching enzyme OS=Anabaena sp. (strain PCC 7120) GN=glgB PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.462e-14
Identity = 52/177 (29.38%), Postives = 92/177 (51.98%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISG 526
            P++G HK WGT +F Y   +V +FL++N  +W  +Y IDG +  +++SM+Y    +    G  E   NQY  +   +A  +L   N +L +  P +++IAE++T +P +  PT  GGLGF+   N+      L +    P   ++  + I  ++  N     +  M A +H++ + G
Sbjct:  391 PRKGEHKEWGTLVFNYSRNEVRNFLVANALFWFDKYHIDGIRVDAVASMLYL--DYCRKEG--EWLPNQYGGRENLEAADFLRQVNHLLFSYFPGVLSIAEESTDWPMVSWPTYTGGLGFNLKWNMGWMHDMLDYFSMDPWFRQFHQNNITFSMWYN---HSENFMLALSHDEVVHG 560          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB2_STRAW (1,4-alpha-glucan-branching enzyme 2 OS=Streptomyces avermitilis GN=glgB2 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.462e-14
Identity = 55/202 (27.23%), Postives = 97/202 (48.02%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEISEHSPEPTNWLAHRAS 610
            P+R  H  WGT  F Y   +V +FL++N  +W  E+ IDG +  +++SM+Y             E+  +  + DA+ +L   N  L+   P +ITIAE++T + G+   T   GLGF    N+      L ++++ P H ++   ++  ++V           YA + N  +   H   E++ G+ +  S  P +W   RA+
Sbjct:  231 PQRAAHPDWGTLEFDYGRKEVRNFLVANAVYWCEEFHIDGLRVDAVASMLYLDYSREEGQWSPNEFGGR-DNPDAVAFLQEMNATLYRRVPGVITIAEESTAWDGVTRATHDNGLGFGLKWNMGWMHDSLGYVQHEPVHRKYHHHEMTFSMV-----------YAYSENYVLPISHD--EVVHGKQALVSKMPGDWWQRRAN 418          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_RHOSR (1,4-alpha-glucan-branching enzyme OS=Rhodococcus sp. (strain RHA1) GN=glgB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 44/145 (30.34%), Postives = 77/145 (53.10%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYT-----HNGFA-SLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+RG    WGT +F +   +V +FL++N  +W+ E+ +DG +  +++SM+Y        G+  ++ G  E         +A+ +L   N  +H  H  ++TIAE++T +PG+   T  GGLGF+   N+      L F+ + P H
Sbjct:  365 PQRGEQLDWGTYVFDFGRREVRNFLVANALYWLDEFHVDGLRVDAVASMLYLDYSRPEGGWTPNIHGGRENL-------EAVAFLQETNATVHKQHRGVVTIAEESTAWPGVTRATNVGGLGFNMKWNMGWMHDTLGFMAHDPVH 502          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_RHILO (1,4-alpha-glucan-branching enzyme OS=Rhizobium loti GN=glgB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 38/138 (27.54%), Postives = 76/138 (55.07%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P++GFH  W T ++ +   +V+ FL++N  +W  +Y +DG +  +++SM+Y    ++   G+ +        + +A+ +L   N+ ++  HP ++TIAE++T +P +  P  +GGLGF +  N+      L +    P
Sbjct:  376 PRKGFHPDWNTAIYNFGRREVVSFLVNNALFWAEKYHVDGLRVDAVASMLYL--DYSRKAGEWIPNEKGGRENLEAVSFLQKMNKEVYGHHPGVMTIAEESTSWPKVSAPVHEGGLGFGFKWNMGFMHDTLEYFSKEP 511          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MYCUA (1,4-alpha-glucan-branching enzyme OS=Mycobacterium ulcerans (strain Agy99) GN=glgB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            PKRG    WGT +F +   +V +FL++N  +W+ ++ IDG +  +++SM+Y         G          + +A+ +L   N   H   P I+TIAE++T +PG+  PT+ GGLGF    N+      L ++   P
Sbjct:  368 PKRGEQLDWGTYVFDFGRPEVRNFLVANALYWIEQFHIDGLRVDAVASMLYLDYS-RPQDGWTPNIYEGRENLEAVQFLQEMNATAHKAAPGIVTIAEESTSWPGVTRPTSIGGLGFSMKWNMGWMHDTLDYVSRDP 503          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MYCBP (1,4-alpha-glucan-branching enzyme OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=glgB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            PKRG    WGT +F +   +V +FL++N  +W+ E+ IDG +  +++SM+Y         G          + +A+ +L   N   H + P I+TIAE++T +PG+  PT  GGLGF    N+      L ++   P
Sbjct:  368 PKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHIDGLRVDAVASMLYLDYSRPE-GGWTPNVHGGRENLEAVQFLQEMNATAHKVAPGIVTIAEESTSWPGVTRPTNIGGLGFSMKWNMGWMHDTLDYVSRDP 503          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB2_STRCO7.245e-1427.941,4-alpha-glucan-branching enzyme 2 OS=Streptomyce... [more]
GLGB_SYNY39.462e-1428.811,4-alpha-glucan-branching enzyme OS=Synechocystis... [more]
GLGB_MYCPA9.462e-1432.121,4-alpha-glucan-branching enzyme OS=Mycobacterium... [more]
GLGB_HAEI89.462e-1427.781,4-alpha-glucan-branching enzyme OS=Haemophilus i... [more]
GLGB_ANASP9.462e-1429.381,4-alpha-glucan-branching enzyme OS=Anabaena sp. ... [more]
GLGB2_STRAW9.462e-1427.231,4-alpha-glucan-branching enzyme 2 OS=Streptomyce... [more]
GLGB_RHOSR1.236e-1330.341,4-alpha-glucan-branching enzyme OS=Rhodococcus s... [more]
GLGB_RHILO1.236e-1327.541,4-alpha-glucan-branching enzyme OS=Rhizobium lot... [more]
GLGB_MYCUA1.236e-1331.391,4-alpha-glucan-branching enzyme OS=Mycobacterium... [more]
GLGB_MYCBP1.236e-1332.121,4-alpha-glucan-branching enzyme OS=Mycobacterium... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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