EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MYCBO (1,4-alpha-glucan-branching enzyme OS=Mycobacterium bovis GN=glgB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            PKRG    WGT +F +   +V +FL++N  +W+ E+ IDG +  +++SM+Y         G          + +A+ +L   N   H + P I+TIAE++T +PG+  PT  GGLGF    N+      L ++   P
Sbjct:  368 PKRGEQLDWGTYVFDFGRPEVRNFLVANALYWLQEFHIDGLRVDAVASMLYLDYSRPE-GGWTPNVHGGRENLEAVQFLQEMNATAHKVAPGIVTIAEESTSWPGVTRPTNIGGLGFSMKWNMGWMHDTLDYVSRDP 503          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_METFK (1,4-alpha-glucan-branching enzyme OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=glgB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 43/140 (30.71%), Postives = 79/140 (56.43%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+ G H+ WGT +F Y   +V +FLL++ ++W+ E+ +DG +  +++SM+Y    ++   G+ L        + +A+ +L   N ++H   P  +TIAE++T +P +  P   GGLGF    N+      LS++++ P H
Sbjct:  363 PRLGEHQDWGTYIFNYGRNEVRNFLLASAHYWLEEFHMDGLRVDAVASMLYL--DYSRKEGEWLPNRHGGRENLEAIDFLKQLNVMVHEDFPGALTIAEESTSWPMVSRPVYLGGLGFSMKWNMGWMNDTLSYMQHDPIH 500          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MAGSA (1,4-alpha-glucan-branching enzyme OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=glgB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 41/140 (29.29%), Postives = 76/140 (54.29%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+ G HK W T ++ Y   +V+++L +N  +W+ +Y +DG +  +++SM+Y    ++   G+ +        + +A+ +L   N +++A HP  +TIAE++T +P +  P   GGLGF Y  N+      L +    P H
Sbjct:  376 PRLGVHKDWNTLIYNYGRSEVVNYLYANALYWLEQYHVDGLRVDAVASMLYL--DYSREPGEWIPNRHGGNENLEAIDFLRRMNMLVYAEHPGAMTIAEESTAWPMVSRPVHLGGLGFGYKWNMGWMHDTLRYFSKDPIH 513          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_HAEIN (1,4-alpha-glucan-branching enzyme OS=Haemophilus influenzae GN=glgB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 50/180 (27.78%), Postives = 99/180 (55.00%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHS 535
            P+ G+H+ W T ++ Y   +V +FL SN  +W+  + +DG +  +++SMIY     A    + E   NQY  +   +A+ +L   N  +H+     I+IAE++T + G+  P+  GGLGF++  N+      L++++  P + ++  +K+   +V   QYS+  ++   +H++ + G +S
Sbjct:  362 PREGYHQDWNTLIYNYGRNEVKNFLSSNALYWLERFGVDGIRVDAVASMIYRDYSRA----EGEWIPNQYGGRENLEAIEFLKHTNWKIHSEMAGAISIAEESTSFAGVTHPSENGGLGFNFKWNMGWMNDTLAYMKLDPIYRQYHHNKMTFGMV--YQYSENFVL-PLSHDEVVHGKYS 534          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ACTPJ (1,4-alpha-glucan-branching enzyme OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=glgB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 54/192 (28.12%), Postives = 92/192 (47.92%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-----DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ G+H+ W T +F Y   +V ++L SN  +W   + IDG +  ++SSMIY          D E   NQY  +   +AL +L   N +L       + IAE++T + G+    T+ G+GFDY  N+      L ++   P      H+W    ++       QYS+K ++   +H++ + G  S    + G+
Sbjct:  365 PREGYHQDWNTLIFNYGRHEVFNYLSSNALYWTERFGIDGLRVDAVSSMIYRDYS----RKDGEWIPNQYGGRENLEALDFLRRTNRMLKKEGHGAVVIAEESTSFAGITHSPTENGVGFDYKWNMGWMNDTLRYMSLDPIYRQYHHDWMTFGMMY------QYSEKFVL-PLSHDEVVHGKCSILGKMSGD 545          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ACTP7 (1,4-alpha-glucan-branching enzyme OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=glgB PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.236e-13
Identity = 54/192 (28.12%), Postives = 92/192 (47.92%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-----DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ G+H+ W T +F Y   +V ++L SN  +W   + IDG +  ++SSMIY          D E   NQY  +   +AL +L   N +L       + IAE++T + G+    T+ G+GFDY  N+      L ++   P      H+W    ++       QYS+K ++   +H++ + G  S    + G+
Sbjct:  365 PREGYHQDWNTLIFNYGRHEVFNYLSSNALYWTERFGIDGLRVDAVSSMIYRDYS----RKDGEWIPNQYGGRENLEALDFLRRTNRMLKKEGHGAVVIAEESTSFAGITHSPTENGVGFDYKWNMGWMNDTLRYMSLDPIYRQYHHDWMTFGMMY------QYSEKFVL-PLSHDEVVHGKCSILGKMSGD 545          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ROSDO (1,4-alpha-glucan-branching enzyme OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=glgB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 42/144 (29.17%), Postives = 72/144 (50.00%), Query Frame = 2
Query:   11 KRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTH------NGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            K GFH  W T ++ Y   +V ++L +N  +W+ E+ +DG +  +++SM+Y            +  G  E Y       +A+ +L   N   +   P I+TIAE++T +PG+  P   GGLGF +  N+      L +++  P H
Sbjct:  367 KEGFHPDWNTLVYNYGRAEVANYLAANALYWLQEHHVDGLRVDAVASMLYRDYSRKDGEWIPNRDGGRENY-------EAISFLQKVNTESYGEVPGIMTIAEESTAFPGVSAPVDAGGLGFGFKWNMGWMNDTLQYMQQDPIH 503          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PROMT (1,4-alpha-glucan-branching enzyme OS=Prochlorococcus marinus (strain NATL2A) GN=glgB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 51/177 (28.81%), Postives = 95/177 (53.67%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDL---EEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISG 526
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y    +    G+    E+  N+  + +A+ +L  AN +L    P  ++IAE++T + G+ +PT   GLGF+   N+      L + E  P   +++ + I  ++  N     +  M A +H++ + G
Sbjct:  388 PRVGEHKEWGTLIFNYSRNEVRNFLVANLIFWFDQFHIDGIRVDAVASMLY--KDYLRPEGEWIPNEDGGNE--NFEAVRFLQQANHVLFQHFPGALSIAEESTTWTGVTKPTDMDGLGFNLKWNMGWMHDMLDYFEIDPWFRQFNQNNITFSICYN---FTENFMLALSHDEVVHG 557          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PROM1 (1,4-alpha-glucan-branching enzyme OS=Prochlorococcus marinus (strain NATL1A) GN=glgB PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.108e-13
Identity = 51/177 (28.81%), Postives = 95/177 (53.67%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDL---EEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISG 526
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y    +    G+    E+  N+  + +A+ +L  AN +L    P  ++IAE++T + G+ +PT   GLGF+   N+      L + E  P   +++ + I  ++  N     +  M A +H++ + G
Sbjct:  388 PRVGEHKEWGTLIFNYSRNEVRNFLVANLIFWFDQFHIDGIRVDAVASMLY--KDYLRPEGEWIPNEDGGNE--NFEAVRFLQQANHVLFQHFPGALSIAEESTTWSGVTKPTDMDGLGFNLKWNMGWMHDMLDYFEIDPWFRQFNQNNITFSICYN---FTENFMLALSHDEVVHG 557          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_YERPS (1,4-alpha-glucan-branching enzyme OS=Yersinia pseudotuberculosis GN=glgB PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.753e-13
Identity = 48/188 (25.53%), Postives = 95/188 (50.53%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQ---YSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ G+H+ W T ++ Y   +V ++L  N  +W+  + ID  +  +++SMIY    ++   G  +  Y     + +A+ +L   N+ +    P  +T+AE++T +PG+  P   GGLGF+Y  N+      L++++  P H     K    L+  G    Y++  I+   +H++ + G  S  + + G+
Sbjct:  362 PREGYHQDWNTLIYNYGRNEVRNYLAGNAFYWMERFGIDALRIDAVASMIY--RDYSRAEGQWVPNYYGGRENLEAIAFLRYTNKTIGVERPGSVTMAEESTDFPGVTLPPDIGGLGFNYKWNMGWMHDTLNYMQCDPVHR----KYHHNLMTFGMLYAYTENFIL-PLSHDEVVHGKRSILDRMPGD 542          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_MYCBO1.236e-1332.121,4-alpha-glucan-branching enzyme OS=Mycobacterium... [more]
GLGB_METFK1.236e-1330.711,4-alpha-glucan-branching enzyme OS=Methylobacill... [more]
GLGB_MAGSA1.236e-1329.291,4-alpha-glucan-branching enzyme OS=Magnetospiril... [more]
GLGB_HAEIN1.236e-1327.781,4-alpha-glucan-branching enzyme OS=Haemophilus i... [more]
GLGB_ACTPJ1.236e-1328.131,4-alpha-glucan-branching enzyme OS=Actinobacillu... [more]
GLGB_ACTP71.236e-1328.131,4-alpha-glucan-branching enzyme OS=Actinobacillu... [more]
GLGB_ROSDO2.108e-1329.171,4-alpha-glucan-branching enzyme OS=Roseobacter d... [more]
GLGB_PROMT2.108e-1328.811,4-alpha-glucan-branching enzyme OS=Prochlorococc... [more]
GLGB_PROM12.108e-1328.811,4-alpha-glucan-branching enzyme OS=Prochlorococc... [more]
GLGB_YERPS2.753e-1325.531,4-alpha-glucan-branching enzyme OS=Yersinia pseu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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