EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_FUSNN (1,4-alpha-glucan-branching enzyme OS=Fusobacterium nucleatum subsp. nucleatum GN=glgB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13
Identity = 40/129 (31.01%), Postives = 70/129 (54.26%), Query Frame = 2
Query:   32 WGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            WG+  F     +V  FLLSNL +W+ E+ IDG +  ++S+M+Y  +G +              +K ++ +L   N+ LH  +P+++ IAED++ +P + +    GGLGFD+  N+      L ++E  P
Sbjct:  267 WGSANFNVSRNEVRSFLLSNLYFWIKEFHIDGIRMDAVSNMLYYKDGLSE-------------NKHSVEFLQYLNQSLHEEYPDVMLIAEDSSAWPLVTKYQADGGLGFDFKWNMGWMNDTLKYMEQDP 382          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_CHLMU (1,4-alpha-glucan-branching enzyme OS=Chlamydia muridarum GN=glgB PE=3 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.596e-13
Identity = 45/139 (32.37%), Postives = 71/139 (51.08%), Query Frame = 2
Query:    2 TRPKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLE 409
            TR     H +W T  F Y   +V +FLL +  +W+ +  IDG +  ++SSM+Y   G        E   N+Y  +   DA+ +L   N I+H  +P ++T AE++T +P +     +GGLGFDY  N+      L + E
Sbjct:  354 TRNPSPLHPHWHTYTFDYAKPEVCNFLLGSALFWIDKMHIDGIRVDAVSSMLYLDYG----RNPGEWIPNRYGGRENLDAVRFLQQFNTIIHEKYPGVLTFAEESTTFPKITVSVEEGGLGFDYKWNMGWMHDTLHYFE 488          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_YERE8 (1,4-alpha-glucan-branching enzyme OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=glgB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 48/188 (25.53%), Postives = 94/188 (50.00%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQ---YSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ G+H+ W T ++ Y   +V ++L  N  +W+  + ID  +  +++SMIY    ++   G  +  Y     + +A+ +L   N  +    P  +T+AE++T +PG+  P   GGLGF+Y  N+      L++++  P H     K    L+  G    Y++  I+   +H++ + G  S  + + G+
Sbjct:  362 PREGYHQDWNTLIYNYGRNEVRNYLAGNAFYWMERFGIDALRIDAVASMIY--RDYSRAEGQWVPNYYGGRENLEAIAFLRYTNHTIGVERPGGVTMAEESTDFPGVTLPPDAGGLGFNYKWNMGWMHDTLNYMQCDPVHR----KYHHNLMTFGMLYAYTENFIL-PISHDEVVHGKRSVLDRMPGD 542          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SHESW (1,4-alpha-glucan-branching enzyme OS=Shewanella sp. (strain W3-18-1) GN=glgB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 44/138 (31.88%), Postives = 73/138 (52.90%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P++G H  W T ++ Y   +V  FLLSN  +W+ E+  DG +  ++SSM+Y    ++   G  L        + +A+ +L + N+ L+   P I  IAE++T + G+ +PT   GLGF +  N+      LS+L   P
Sbjct:  373 PRKGTHPDWDTLIYNYGRGEVRSFLLSNACYWLREFHFDGLRIDAVSSMLYL--DYSREPGQWLPNAYGGRENLEAISFLQMLNQRLYQAFPGICMIAEESTAFAGVTKPTDHHGLGFGFKWNMGWMNDSLSYLSRDP 508          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SHEPC (1,4-alpha-glucan-branching enzyme OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=glgB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 44/138 (31.88%), Postives = 73/138 (52.90%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P++G H  W T ++ Y   +V  FLLSN  +W+ E+  DG +  ++SSM+Y    ++   G  L        + +A+ +L + N+ L+   P I  IAE++T + G+ +PT   GLGF +  N+      LS+L   P
Sbjct:  373 PRKGTHPDWDTLIYNYGRGEVRSFLLSNACYWLREFHFDGLRIDAVSSMLYL--DYSREPGQWLPNAYGGRENLEAISFLQMLNQRLYQAFPGICMIAEESTAFAGVTKPTDHHGLGFGFKWNMGWMNDSLSYLSRDP 508          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_CHLTB (1,4-alpha-glucan-branching enzyme OS=Chlamydia trachomatis (strain L2b/UCH-1/proctitis) GN=glgB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 2
Query:    2 TRPKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK--------DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLE 409
            TR     H +W T  F Y   +V +FLL +  +W+ +  +DG +  ++SSM+Y   G          Y  ++V          DA+ +L   N ++H  +P ++T AE++T +P +     +GGLGFDY  N+      L + E
Sbjct:  354 TRNPSPLHPHWHTYTFDYAKPEVCNFLLGSALFWIDKMHVDGIRVDAVSSMLYLDYG---------RYAGEWVPNRYGGRENLDAIRFLQQFNTVIHEKYPGVLTFAEESTTFPKITVSVEEGGLGFDYKWNMGWMHDTLHYFE 488          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_CHLT2 (1,4-alpha-glucan-branching enzyme OS=Chlamydia trachomatis (strain L2/434/Bu / ATCC VR-902B) GN=glgB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 2
Query:    2 TRPKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK--------DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLE 409
            TR     H +W T  F Y   +V +FLL +  +W+ +  +DG +  ++SSM+Y   G          Y  ++V          DA+ +L   N ++H  +P ++T AE++T +P +     +GGLGFDY  N+      L + E
Sbjct:  354 TRNPSPLHPHWHTYTFDYAKPEVCNFLLGSALFWIDKMHVDGIRVDAVSSMLYLDYG---------RYAGEWVPNRYGGRENLDAIRFLQQFNTVIHEKYPGVLTFAEESTTFPKITVSVEEGGLGFDYKWNMGWMHDTLHYFE 488          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB2_RHIEC (1,4-alpha-glucan-branching enzyme 2 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=glgB2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 43/140 (30.71%), Postives = 75/140 (53.57%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKD---ALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ GFH+ W T ++     +V  FL+++   W+  Y IDG +  +++SM+Y          + E   N+Y  ++   A+ +    N I+H   P+ + IAE++T +PG+ +P  +GGLGFD   N+      LS++E  P
Sbjct:  370 PREGFHRDWNTLIYNLGRNEVKGFLIASALEWLERYHIDGLRVDAVASMLYRDYS----RNEGEWIPNRYGGRENLEAVEFFKHLNSIVHERCPHAMMIAEESTAWPGVTKPPEEGGLGFDMKWNMGWMHDSLSYIEKDP 505          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB2_CLOPS (1,4-alpha-glucan-branching enzyme 2 OS=Clostridium perfringens (strain SM101 / Type A) GN=glgB2 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.696e-13
Identity = 50/177 (28.25%), Postives = 94/177 (53.11%), Query Frame = 2
Query:   32 WGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            WGT  F     +V  FL SN  +W+ E+ +DG +  ++S+M+Y   G      +   Y  +  + +A+ +L   N I+       IT+AE++T + G+ +   +GGLGFDY  N+      LS++E  P + ++  +K+  +++ N  YS+K I+   +H++ + G  S    ++G+
Sbjct:  302 WGTCNFDLGRPEVKSFLFSNAMYWINEFHVDGLRVDAVSNMLYLDYGREYGEWEPNIY-GENGNLEAIAFLKELNTIIKKEGKGAITVAEESTSWEGITKSVEEGGLGFDYKWNMGWMNDTLSYIELDPIYRKYHHNKMNFSMMYN--YSEKFIL-PISHDEVVHGKKSLINKMWGD 474          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PASMU (1,4-alpha-glucan-branching enzyme OS=Pasteurella multocida GN=glgB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 49/177 (27.68%), Postives = 97/177 (54.80%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISG 526
            P+ G+H+ W T ++ Y   +V +FL SN  +W+  + +DG +  +++SMIY     A    + E   NQY  +   +A+ +L   N  + +     I+IAE++T + G+ +P+T+GGLGF +  N+      LS+++  P + ++   ++   +V   QYS+  ++   +H++ + G
Sbjct:  362 PREGYHQDWNTLIYNYGRNEVRNFLSSNALYWLERFGLDGIRVDAVASMIYRDYSRA----EGEWIPNQYGGRENLEAIEFLKHTNWKIDSEVQGAISIAEESTSFAGVTKPSTEGGLGFHFKWNMGWMNDTLSYMQKDPVYRQYHHDQMTFGMV--YQYSENFVL-PLSHDEVVHG 531          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_FUSNN3.596e-1331.011,4-alpha-glucan-branching enzyme OS=Fusobacterium... [more]
GLGB_CHLMU3.596e-1332.371,4-alpha-glucan-branching enzyme OS=Chlamydia mur... [more]
GLGB_YERE84.696e-1325.531,4-alpha-glucan-branching enzyme OS=Yersinia ente... [more]
GLGB_SHESW4.696e-1331.881,4-alpha-glucan-branching enzyme OS=Shewanella sp... [more]
GLGB_SHEPC4.696e-1331.881,4-alpha-glucan-branching enzyme OS=Shewanella pu... [more]
GLGB_CHLTB4.696e-1329.171,4-alpha-glucan-branching enzyme OS=Chlamydia tra... [more]
GLGB_CHLT24.696e-1329.171,4-alpha-glucan-branching enzyme OS=Chlamydia tra... [more]
GLGB2_RHIEC4.696e-1330.711,4-alpha-glucan-branching enzyme 2 OS=Rhizobium e... [more]
GLGB2_CLOPS4.696e-1328.251,4-alpha-glucan-branching enzyme 2 OS=Clostridium... [more]
GLGB_PASMU6.133e-1327.681,4-alpha-glucan-branching enzyme OS=Pasteurella m... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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