EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_CLOP1 (1,4-alpha-glucan-branching enzyme OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=glgB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 51/177 (28.81%), Postives = 93/177 (52.54%), Query Frame = 2
Query:   32 WGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            WGT  F     +V  FL SN  +W+ E+ IDG +  ++S+M+Y   G      +   Y     + +A+ +L   N I+       IT+AE++T + G+ +P  + GLGFDY  N+      LS++E  P + ++  +K+  +++ N  YS+K I+   +H++ + G  S    ++G+
Sbjct:  302 WGTCNFDLGRPEVKSFLFSNAMYWINEFHIDGLRVDAVSNMLYLDYGREYGEWEPNIYGGNG-NLEAIAFLKELNTIIKKEGKGAITVAEESTSWEGITKPVEEDGLGFDYKWNMGWMNDTLSYIELDPIYRKYHHNKMNFSMMYN--YSEKFIL-PISHDEVVHGKKSLINKMWGD 474          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_BACLD (1,4-alpha-glucan-branching enzyme OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=glgB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 48/167 (28.74%), Postives = 83/167 (49.70%), Query Frame = 2
Query:   32 WGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGH 532
            WGT  F     +V  FL+SN  +W+  Y IDGF+  ++++++Y  N         +   N +    A+ ++   NE + A  P+ + IAED+T +P +  PT +GGLGF+Y  N+      L+++E +P+    +  +VS            +MYA + N  +   H
Sbjct:  274 WGTANFDLGKREVHSFLISNALYWIEMYHIDGFRVDAVANLLYWPNR-------PQPEANGF----AIEFIQTLNEQVFAKDPHFLMIAEDSTDWPLVTHPTYEGGLGFNYKWNMGWMNDVLTYMEASPEQRKHLHHLVSF----------SLMYAYSENYILPFSH 419          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ACTP2 (1,4-alpha-glucan-branching enzyme OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=glgB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 53/192 (27.60%), Postives = 91/192 (47.40%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-----DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ G+H+ W T +F Y   +V ++L SN  +W   + IDG +  ++SSMIY          D E   NQY  +   +AL +L   N +L       + IAE++T + G+     + G+GFDY  N+      L ++   P      H+W    ++       QYS+K ++   +H++ + G  S    + G+
Sbjct:  365 PREGYHQDWNTLIFNYGRHEVFNYLSSNALYWTERFGIDGLRVDAVSSMIYRDYS----RKDGEWIPNQYGGRENLEALDFLRRTNRMLKKEGHGAVVIAEESTSFAGITHSPEENGVGFDYKWNMGWMNDTLRYMSLDPIYRQYHHDWMTFGMMY------QYSEKFVL-PLSHDEVVHGKCSILGKMSGD 545          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB1_STRAW (1,4-alpha-glucan-branching enzyme 1 OS=Streptomyces avermitilis GN=glgB1 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 6.133e-13
Identity = 54/202 (26.73%), Postives = 95/202 (47.03%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEISEHSPEPTNWLAHRAS 610
            P R  H  WGT  F Y   +V +FL++N  +W  E+ IDG +  +++SM+Y             E+  +  + DA+ +L   N  ++   P ++TIAE++T + G+   T   GLGF    N+      L ++++ P H  +   ++  ++V           YA + N  +   H   E++ G+ S  S  P +W   RA+
Sbjct:  470 PLRAAHPDWGTLEFDYGRREVRNFLVANAVYWCEEFHIDGLRVDAVASMLYLDYSREEGQWSPNEFGGR-ENLDAVAFLQEMNATVYRRVPGVVTIAEESTAWEGVTRATHDNGLGFGLKWNMGWMHDSLGYVQHEPVHRRFHHHEMTFSMV-----------YAYSENYVLPISHD--EVVHGKGSLVSKMPGDWWQQRAT 657          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ENT38 (1,4-alpha-glucan-branching enzyme OS=Enterobacter sp. (strain 638) GN=glgB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 43/140 (30.71%), Postives = 75/140 (53.57%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G+H+ W T ++ Y   +V ++L+ N  +W+  + ID  +  +++SMIY    ++   G  E   N+Y  +   +A+ +L   N IL    P  +T+AE++T +PG+  P + GGLGF Y  NL      L + +  P
Sbjct:  362 PREGYHQDWNTLIYNYGRREVANYLVGNALYWIERFGIDALRVDAVASMIY--RDYSRKEG--EWIPNEYGGRENLEAIEFLRNTNRILGEQVPGAVTMAEESTDFPGVSRPPSMGGLGFWYKWNLGWMHDTLDYFKLDP 497          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_DESHY (1,4-alpha-glucan-branching enzyme OS=Desulfitobacterium hafniense (strain Y51) GN=glgB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 41/122 (33.61%), Postives = 66/122 (54.10%), Query Frame = 2
Query:   11 KRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNL 376
            +R  H+ WGT  F Y   +V  FL+SN  +W+  + +DG +   +SSM+Y   G A        Y  +  + +A+ ++   N  LH L+P+ + IAE+AT + G+  P  Q GLGF +  N+
Sbjct:  268 EREVHEQWGTYKFDYSRSEVRSFLISNAVFWLDVFHVDGLRVDGVSSMLYLDYGKAKGAWQPNRYGGR-ENLEAVGFIKQLNATLHGLYPDALLIAEEATDWQGVTGPLDQEGLGFTFKWNM 388          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ANAVT (1,4-alpha-glucan-branching enzyme OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=glgB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 45/139 (32.37%), Postives = 75/139 (53.96%), Query Frame = 2
Query:   11 KRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            ++G HK WGT +F Y   +V +FL++N  +W  +Y IDG +  +++SM+Y    +    G  E   NQY  +   +A  +L   N +L +  P +++IAE++T +P +  PT  GGLGF+   N+      L +    P
Sbjct:  392 RKGEHKEWGTLVFNYSRNEVRNFLVANALFWFDKYHIDGIRVDAVASMLYL--DYCRKEG--EWLPNQYGGRENLEAADFLRQVNHLLFSYFPGVLSIAEESTDWPMVSWPTYTGGLGFNLKWNMGWMHDMLDYFSMDP 526          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB2_CLOPE (1,4-alpha-glucan-branching enzyme 2 OS=Clostridium perfringens GN=glgB2 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 8.010e-13
Identity = 50/177 (28.25%), Postives = 93/177 (52.54%), Query Frame = 2
Query:   32 WGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            WGT  F     +V  FL SN  +W+ E+ +DG +  ++S+M+Y   G      +   Y     + +A+ +L   N I+       IT+AE++T + G+ +P  + GLGFDY  N+      LS++E  P + ++  +K+  +++ N  YS+K I+   +H++ + G  S    ++G+
Sbjct:  307 WGTCNFDLGRPEVKSFLFSNAMYWINEFHVDGLRVDAVSNMLYLDYGREYGEWEPNIYGGNG-NLEAIAFLKELNTIIKKEGKGAITVAEESTSWEGITKPVEEDGLGFDYKWNMGWMNDTLSYIELDPIYRKYHHNKMNFSMMYN--YSEKFIL-PISHDEVVHGKKSLINKMWGD 479          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SYNJA (1,4-alpha-glucan-branching enzyme OS=Synechococcus sp. (strain JA-3-3Ab) GN=glgB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12
Identity = 51/188 (27.13%), Postives = 95/188 (50.53%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYC-NQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P++G HK WGT +F Y   +V ++L++N  +W  +Y IDG +  +++SM+Y       L  D +E+  N Y  +   +A+ +    N ++   +P +++IAE++T +P +  PT  GGLGF+   N+      L++    P        +V+            +MYA + N  ++  H   E++ G+
Sbjct:  394 PRKGEHKGWGTLVFNYGRNEVRNYLIANALFWFDKYHIDGLRVDAVASMLY-------LDYDRKEWIPNCYGGREHLEAIDFFRQLNTLIFKYYPGVLSIAEESTAWPMVTWPTHVGGLGFNLKWNMGWMHDMLNYFRMDPWFRQFHHNLVTF----------SLMYAFSENYMLAFSHD--EVVHGK 562          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_FRATT (1,4-alpha-glucan-branching enzyme OS=Francisella tularensis subsp. tularensis GN=glgB PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.046e-12
Identity = 48/187 (25.67%), Postives = 99/187 (52.94%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEI 562
            P +  +K WGT  F     +V  FL+SN  +W+ E+ IDG +  ++S+++Y +  +    G  +      + + + + +L   N +L      +ITIAE+++ +P +  P  +GGLGFD+  N+      L ++   P + ++  + I  ++V +  YS+K I+ + +H++ + G  S    ++G++
Sbjct:  275 PTKAINKGWGTHNFDLGRNEVKCFLISNAMYWINEFHIDGLRVDAVSNILYLN--YDREDGQWIPNIYGGHENLEGIAFLKELNGVLKHTCKGVITIAEESSSWPDISTPVEKGGLGFDFKWNMGWMNDTLRYISLDPVYRKYHHNLITFSMVYH--YSEKFIL-SISHDEVVHGKKSLINKMWGDL 456          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_CLOP16.133e-1328.811,4-alpha-glucan-branching enzyme OS=Clostridium p... [more]
GLGB_BACLD6.133e-1328.741,4-alpha-glucan-branching enzyme OS=Bacillus lich... [more]
GLGB_ACTP26.133e-1327.601,4-alpha-glucan-branching enzyme OS=Actinobacillu... [more]
GLGB1_STRAW6.133e-1326.731,4-alpha-glucan-branching enzyme 1 OS=Streptomyce... [more]
GLGB_ENT388.010e-1330.711,4-alpha-glucan-branching enzyme OS=Enterobacter ... [more]
GLGB_DESHY8.010e-1333.611,4-alpha-glucan-branching enzyme OS=Desulfitobact... [more]
GLGB_ANAVT8.010e-1332.371,4-alpha-glucan-branching enzyme OS=Anabaena vari... [more]
GLGB2_CLOPE8.010e-1328.251,4-alpha-glucan-branching enzyme 2 OS=Clostridium... [more]
GLGB_SYNJA1.046e-1227.131,4-alpha-glucan-branching enzyme OS=Synechococcus... [more]
GLGB_FRATT1.046e-1225.671,4-alpha-glucan-branching enzyme OS=Francisella t... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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