EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_BURCA (1,4-alpha-glucan-branching enzyme OS=Burkholderia cenocepacia (strain AU 1054) GN=glgB PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.366e-12
Identity = 41/142 (28.87%), Postives = 74/142 (52.11%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILH--ALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+ G H  W T +F     +V  FL+++   W   Y +DG +  +++SM+Y    ++   G+ +        + +++ +L   N+ LH  A    ++T+AE++T +PG+  PT  GGLGFD+  N+      L++L   P H
Sbjct:  372 PREGMHPDWNTCVFNVGRTEVSAFLVASALAWARRYHVDGIRVDAVASMLY--RDYSRKEGEWVPNVYGGRENLESVAFLRRLNDTLHGDAAPAGVVTVAEESTAWPGVTAPTADGGLGFDFKWNMGWMHDTLAYLHEDPIH 511          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SHISS (1,4-alpha-glucan-branching enzyme OS=Shigella sonnei (strain Ss046) GN=glgB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 47/186 (25.27%), Postives = 96/186 (51.61%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ G+H+ W T ++ Y   +V +FL+ N  +W+  + ID  +  +++SMIY    ++   G+ +        + +A+ +L   N IL       +T+AE++T +PG+  P   GGLGF Y  NL      L +++  P + ++   K+   ++ N  Y++  ++   +H++ + G  S  + + G+
Sbjct:  362 PREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIY--RDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYN--YTENFVL-PLSHDEVVHGKKSILDRMPGD 542          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SHIFL (1,4-alpha-glucan-branching enzyme OS=Shigella flexneri GN=glgB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 47/186 (25.27%), Postives = 96/186 (51.61%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ G+H+ W T ++ Y   +V +FL+ N  +W+  + ID  +  +++SMIY    ++   G+ +        + +A+ +L   N IL       +T+AE++T +PG+  P   GGLGF Y  NL      L +++  P + ++   K+   ++ N  Y++  ++   +H++ + G  S  + + G+
Sbjct:  362 PREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIY--RDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPIYRQYHHDKLTFGMLYN--YTENFVL-PLSHDEVVHGKKSILDRMPGD 542          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SHIF8 (1,4-alpha-glucan-branching enzyme OS=Shigella flexneri serotype 5b (strain 8401) GN=glgB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 47/186 (25.27%), Postives = 96/186 (51.61%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ G+H+ W T ++ Y   +V +FL+ N  +W+  + ID  +  +++SMIY    ++   G+ +        + +A+ +L   N IL       +T+AE++T +PG+  P   GGLGF Y  NL      L +++  P + ++   K+   ++ N  Y++  ++   +H++ + G  S  + + G+
Sbjct:  362 PREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIY--RDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPIYRQYHHDKLTFGMLYN--YTENFVL-PLSHDEVVHGKKSILDRMPGD 542          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SHIBS (1,4-alpha-glucan-branching enzyme OS=Shigella boydii serotype 4 (strain Sb227) GN=glgB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 47/186 (25.27%), Postives = 96/186 (51.61%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ G+H+ W T ++ Y   +V +FL+ N  +W+  + ID  +  +++SMIY    ++   G+ +        + +A+ +L   N IL       +T+AE++T +PG+  P   GGLGF Y  NL      L +++  P + ++   K+   ++ N  Y++  ++   +H++ + G  S  + + G+
Sbjct:  362 PREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIY--RDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPVYRQYHHDKLTFGILYN--YTENFVL-PLSHDEVVHGKKSILDRMPGD 542          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_RHOS4 (1,4-alpha-glucan-branching enzyme OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=glgB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 40/147 (27.21%), Postives = 72/147 (48.98%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK--------DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P++GFH+ W T+++ +   +V +FL ++  +W+  Y +D  +  +++SM+Y          D      ++V          +A+ +L   NE +   HP  ITIAE++T +P +  P   GGLGF +  N+      L +    P H
Sbjct:  366 PRQGFHRDWNTQIYNFGRQEVANFLQASALFWLDRYHVDALRVDAVASMLYL---------DYSRNAGEWVPNRHGGRENLEAIDFLRGVNERVRLDHPGCITIAEESTAFPQVSRPVEDGGLGFGFKWNMGWMHDTLGYFRRDPIH 503          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_RHOS1 (1,4-alpha-glucan-branching enzyme OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=glgB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 40/147 (27.21%), Postives = 72/147 (48.98%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK--------DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P++GFH+ W T+++ +   +V +FL ++  +W+  Y +D  +  +++SM+Y          D      ++V          +A+ +L   NE +   HP  ITIAE++T +P +  P   GGLGF +  N+      L +    P H
Sbjct:  366 PRQGFHRDWNTQIYNFGRQEVANFLQASALFWLDRYHVDALRVDAVASMLYL---------DYSRNAGEWVPNRHGGRENLEAIDFLRGVNERVRLDHPGCITIAEESTAFPQVSRPVEDGGLGFGFKWNMGWMHDTLGYFRRDPIH 503          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_RHOP2 (1,4-alpha-glucan-branching enzyme OS=Rhodopseudomonas palustris (strain HaA2) GN=glgB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 42/139 (30.22%), Postives = 72/139 (51.80%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P +G H  WGT ++ Y   +V++FL+SN  +W+  Y+IDG +  +++SM+Y         G +        + +A+ +L   N  ++A  P   T AE++T +P +  P   GGLGF Y  N+      L+++   P H
Sbjct:  356 PLQGRHLDWGTLIYNYGRTEVVNFLVSNALFWLERYRIDGLRVDAVASMLYLDYS-RPAGGWIPNKFGGRENIEAIDFLRRFNAEVYAKFPQATTAAEESTAWPQVSRPVEFGGLGFGYKWNMGWMHDTLNYISKDPIH 493          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_RALSO (1,4-alpha-glucan-branching enzyme OS=Ralstonia solanacearum GN=glgB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 40/137 (29.20%), Postives = 72/137 (52.55%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ GFH+ W T ++ +   +V  FL+++   W+  + IDG +  +++SM+Y      +       Y  +  + +A+ +L   N ++HA  P  ITIAE++T +PG+       GLGFDY  N+      L +++  P
Sbjct:  411 PREGFHQDWNTLIYNFGRHEVRGFLIASALEWLEHFHIDGLRVDAVASMLYRDYSRPADAWVPNRYGGRE-NLEAVAFLQQMNAVVHARCPGAITIAEESTAWPGVTAAVEFNGLGFDYKWNMGWMHDTLHYMQRDP 546          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ECOUT (1,4-alpha-glucan-branching enzyme OS=Escherichia coli (strain UTI89 / UPEC) GN=glgB PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.784e-12
Identity = 47/186 (25.27%), Postives = 96/186 (51.61%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+ G+H+ W T ++ Y   +V +FL+ N  +W+  + ID  +  +++SMIY    ++   G+ +        + +A+ +L   N IL       +T+AE++T +PG+  P   GGLGF Y  NL      L +++  P + ++   K+   ++ N  Y++  ++   +H++ + G  S  + + G+
Sbjct:  362 PREGYHQDWNTLIYNYGRREVSNFLVGNALYWIERFGIDALRVDAVASMIY--RDYSRKEGEWIPNEFGGRENLEAIEFLRNTNRILGEQVSGAVTMAEESTDFPGVSRPQDMGGLGFWYKWNLGWMHDTLDYMKLDPIYRQYHHDKLTFGMLYN--YTENFVL-PLSHDEVVHGKKSILDRMPGD 542          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_BURCA1.366e-1228.871,4-alpha-glucan-branching enzyme OS=Burkholderia ... [more]
GLGB_SHISS1.784e-1225.271,4-alpha-glucan-branching enzyme OS=Shigella sonn... [more]
GLGB_SHIFL1.784e-1225.271,4-alpha-glucan-branching enzyme OS=Shigella flex... [more]
GLGB_SHIF81.784e-1225.271,4-alpha-glucan-branching enzyme OS=Shigella flex... [more]
GLGB_SHIBS1.784e-1225.271,4-alpha-glucan-branching enzyme OS=Shigella boyd... [more]
GLGB_RHOS41.784e-1227.211,4-alpha-glucan-branching enzyme OS=Rhodobacter s... [more]
GLGB_RHOS11.784e-1227.211,4-alpha-glucan-branching enzyme OS=Rhodobacter s... [more]
GLGB_RHOP21.784e-1230.221,4-alpha-glucan-branching enzyme OS=Rhodopseudomo... [more]
GLGB_RALSO1.784e-1229.201,4-alpha-glucan-branching enzyme OS=Ralstonia sol... [more]
GLGB_ECOUT1.784e-1225.271,4-alpha-glucan-branching enzyme OS=Escherichia c... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
back to top