EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_VIBVY (1,4-alpha-glucan-branching enzyme OS=Vibrio vulnificus (strain YJ016) GN=glgB PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 5.361e-17
Identity = 63/201 (31.34%), Postives = 104/201 (51.74%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYD--DLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIY-----THNGFA-SLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEISEHSPEP 583
            P+RG+H+ W +  FIYD     V  FL+SN  +W  ++ IDG +  +++SM+Y     +H  +  ++ G  E Y       DA+  L   NE ++   PN +TIAE++T +PG+  PT  GGLGF +  N+      LS+++  P H ++  + +   LV           YA + N  +S  H   E+++G+ S H+  P
Sbjct:  353 PRRGWHQDWNS--FIYDLGREQVRRFLVSNALYWFEQFHIDGIRVDAVASMLYLDYSRSHGQWIPNMDGGNENY-------DAIATLKWMNEEVYKYFPNAMTIAEESTAFPGVSAPTFMGGLGFGFKWNMGWMHDSLSYIKEEPVHRKYHHNTLTFPLV-----------YAHSENYVLSLSHD--EVVYGKGSIHNKMP 531          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_VIBVU (1,4-alpha-glucan-branching enzyme OS=Vibrio vulnificus GN=glgB PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.361e-17
Identity = 63/201 (31.34%), Postives = 104/201 (51.74%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYD--DLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIY-----THNGFA-SLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEISEHSPEP 583
            P+RG+H+ W +  FIYD     V  FL+SN  +W  ++ IDG +  +++SM+Y     +H  +  ++ G  E Y       DA+  L   NE ++   PN +TIAE++T +PG+  PT  GGLGF +  N+      LS+++  P H ++  + +   LV           YA + N  +S  H   E+++G+ S H+  P
Sbjct:  353 PRRGWHQDWNS--FIYDLGREQVRRFLVSNALYWFEQFHIDGIRVDAVASMLYLDYSRSHGQWIPNMDGGNENY-------DAIATLKWMNEEVYKYFPNAMTIAEESTAFPGVSAPTFMGGLGFGFKWNMGWMHDSLSYIKEEPVHRKYHHNTLTFPLV-----------YAHSENYVLSLSHD--EVVYGKGSIHNKMP 531          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_VIBPA (1,4-alpha-glucan-branching enzyme OS=Vibrio parahaemolyticus GN=glgB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.001e-17
Identity = 60/199 (30.15%), Postives = 103/199 (51.76%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIY-----THNGFA-SLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEISEHSPEP 583
            P+RG+H+ W + ++      V  FL+SN  +W  ++ IDG +  +++SM+Y     +H+ +  ++ G  E Y       DA+  L   NE ++   PN +TIAE++T +PG+  PT  GGLGF +  N+      LS+++  P H ++  + I   LV           YA + N  +S  H   E+++G+ S H+  P
Sbjct:  392 PRRGWHQDWNSYIYDLGREHVRRFLVSNALYWFEQFHIDGIRVDAVASMLYLDYSRSHDQWVPNVDGGNENY-------DAIATLKWMNEEVYKHFPNAMTIAEESTAFPGVSAPTFMGGLGFGFKWNMGWMHDSLSYVKEDPVHRKYHHNTITFPLV-----------YAHSENYVLSLSHD--EVVYGKGSIHNKMP 570          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PROAC (1,4-alpha-glucan-branching enzyme OS=Propionibacterium acnes GN=glgB PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 7.001e-17
Identity = 55/185 (29.73%), Postives = 99/185 (53.51%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P++G HK WGT +F Y   +V  FL+S+  +W+ E+  DG +  +++SM+Y             +Y  +  + +A+ +L   N  L++ HP I+ IAE++T +PG+ +P   GGLGF +  N+      L +LE  P H ++   ++   +V   QYS+  I+   +H++ + G  S    + G+
Sbjct:  266 PRQGEHKDWGTYIFNYGRNEVKSFLVSSALYWISEFHADGLRVDAVASMLYLDYSREEGQWVPNKYGGRE-NLEAIDFLRYVNSHLYSRHPGILMIAEESTSFPGVTKPVDDGGLGFGFKWNMGWMNDSLRYLELNPFHRQYHHGEMTFAMV--YQYSENFIL-PISHDEVVHGKGSMITKIPGD 446          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_MYXXD (1,4-alpha-glucan-branching enzyme OS=Myxococcus xanthus (strain DK 1622) GN=glgB PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.144e-17
Identity = 44/138 (31.88%), Postives = 79/138 (57.25%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P++G    WGT +F +   +V +FL++N  +W+ EY IDG +  +++SM+Y    ++   G+ +        +++A+ +L   NE +H  HP ++ IAE++T +P +  P ++GGLGFDY  N+      LS+    P
Sbjct:  371 PRKGAQPDWGTLVFNFGRNEVRNFLIANALFWIEEYHIDGLRVDAVASMLYLD--YSRKQGEWIPNRWGGRENEEAIHFLRELNETVHRKHPGVVVIAEESTAWPKVSAPVSEGGLGFDYKWNMGWMHDTLSYFSKDP 506          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_JANSC (1,4-alpha-glucan-branching enzyme OS=Jannaschia sp. (strain CCS1) GN=glgB PE=3 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.475e-16
Identity = 54/192 (28.12%), Postives = 101/192 (52.60%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYV--------DKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFG 556
            PK GFH+ W T +F Y   +V ++L++N  +W+ EY +DG +  +++SM+Y          D      Q+V        + +A+ +L   N  ++    +++T+AE++T +PG+ +P   GGLGF Y  N+      LS++   P H +   S++ + ++   QYS+  I+   +H++ + G  S  E + G
Sbjct:  338 PKEGFHQDWNTLIFNYGRTEVRNYLVANALYWMEEYHLDGLRVDAVASMLYR---------DYSRDEGQWVPNKDGGRENLEAISFLQEMNVAVYGADASVMTVAEESTSFPGVSQPVHTGGLGFGYKWNMGWMNDTLSYMALDPIHRQHHHSQMTNPIM--WQYSENFIL-PISHDEVVHGKGSMLEKMPG 517          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_CORDI (1,4-alpha-glucan-branching enzyme OS=Corynebacterium diphtheriae GN=glgB PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 4.538e-16
Identity = 51/174 (29.31%), Postives = 96/174 (55.17%), Query Frame = 2
Query:   11 KRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHE-WSMSKIVSTLVGNGQYSDKMIMYAENHNQCISG 526
            +RG  K WGT +F +   +V +FL++N  +W+ E+ +DG +  +++SM+Y    ++   G+ L        + +A+ +L   N  +H  HP ++TIAE++T +PG+  PT +GGLGF    N+      L +  + P H  +  + I  ++V    YS+K ++   +H++ + G
Sbjct:  367 RRGEQKDWGTYVFDFGRNEVRNFLVANALYWLEEFHVDGLRVDAVASMLYLD--YSREPGEWLPNIYGGRENLEAVQFLQEMNATVHKSHPGVMTIAEESTSWPGVTSPTWEGGLGFSMKWNMGWMNDTLEYFSHEPIHRMYHHNDITFSMV--YAYSEKFVL-PFSHDEVVHG 535          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_NITOC (1,4-alpha-glucan-branching enzyme OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=glgB PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 5.927e-16
Identity = 48/140 (34.29%), Postives = 80/140 (57.14%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G H+ WGT +F Y   +V +FLLS+  +W+ E+ IDG +  +++SM+Y    ++   GD     N+Y  +   +A+ +L   N++LHA HP ++ IAE++T +P +  P   GGLGF    N+      LS++   P
Sbjct:  372 PRLGEHRDWGTLIFNYGRHEVRNFLLSSALYWLEEFHIDGLRVDAVASMLYL--DYSRQEGDW--IPNKYGGRENLEAIDFLRELNKVLHAQHPGVLVIAEESTSWPMVSHPIYVGGLGFSMKWNMGWMNDTLSYMSKDP 507          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_THEFY (1,4-alpha-glucan-branching enzyme OS=Thermobifida fusca (strain YX) GN=glgB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.741e-16
Identity = 52/177 (29.38%), Postives = 96/177 (54.24%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHS 535
            P+RG H  W T +F Y   +V +FL++N  +W+ E+ IDG +  +++SM+Y      S   +   Y  +  + DA+ +L   N   +  +P I  IAE++T +PG+   T  GGLGF +  N+      LS+L++ P H ++  +++  ++V    YS+  ++   +H++ + G  S
Sbjct:  384 PRRGIHPDWDTLIFNYGRTEVRNFLVANALFWLEEFHIDGLRVDAVASMLYLDYSRESGQWEPNAYGGR-ENLDAIDFLRELNATAYRRNPGIAMIAEESTAWPGVTRSTDTGGLGFGFKWNMGWMHDTLSYLQHDPVHRQYHHNEVTFSMV--YAYSENYVL-PLSHDEVVHGKRS 556          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_NITMU (1,4-alpha-glucan-branching enzyme OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=glgB PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 7.741e-16
Identity = 47/140 (33.57%), Postives = 80/140 (57.14%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G H+ WGT +F Y   +V  FLLS+ ++W+ E+ +DG +  +++SM+Y    ++ L G  E   N+Y  +   +A+ +L   N ++H   P  +T+AE++T +PG+  PT  GGLGF    N+      L ++ N P
Sbjct:  375 PRMGLHQDWGTHIFNYGRNEVKSFLLSSAHYWLSEFHLDGLRVDAVASMLYL--DYSRLPG--EWLPNRYGGRENLEAIDFLRELNIMVHQEFPGALTLAEESTAWPGVSRPTYVGGLGFSMKWNMGWMNDTLVYMRNDP 510          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_VIBVY5.361e-1731.341,4-alpha-glucan-branching enzyme OS=Vibrio vulnif... [more]
GLGB_VIBVU5.361e-1731.341,4-alpha-glucan-branching enzyme OS=Vibrio vulnif... [more]
GLGB_VIBPA7.001e-1730.151,4-alpha-glucan-branching enzyme OS=Vibrio paraha... [more]
GLGB_PROAC7.001e-1729.731,4-alpha-glucan-branching enzyme OS=Propionibacte... [more]
GLGB_MYXXD9.144e-1731.881,4-alpha-glucan-branching enzyme OS=Myxococcus xa... [more]
GLGB_JANSC3.475e-1628.131,4-alpha-glucan-branching enzyme OS=Jannaschia sp... [more]
GLGB_CORDI4.538e-1629.311,4-alpha-glucan-branching enzyme OS=Corynebacteri... [more]
GLGB_NITOC5.927e-1634.291,4-alpha-glucan-branching enzyme OS=Nitrosococcus... [more]
GLGB_THEFY7.741e-1629.381,4-alpha-glucan-branching enzyme OS=Thermobifida ... [more]
GLGB_NITMU7.741e-1633.571,4-alpha-glucan-branching enzyme OS=Nitrosospira ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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