EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_BACST (1,4-alpha-glucan-branching enzyme OS=Bacillus stearothermophilus GN=glgB PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 1.011e-15
Identity = 56/180 (31.11%), Postives = 94/180 (52.22%), Query Frame = 2
Query:   32 WGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGEISE 568
            WGT  F     +V  FL+SN  +W+  + +DGF+  ++++M+Y  N           Y N Y    A+ +L   NE + A  PNI+ IAED+T +P +  PT  GGLGF+Y  N+      L+++E  P+H ++  +K+  +L+    YS+  I+   +H++ + G  S    + G   E
Sbjct:  274 WGTANFDLGKPEVRSFLISNALFWMEYFHVDGFRVDAVANMLYWPNSDVL-------YKNTY----AVEFLQKLNETVFAYDPNILMIAEDSTDWPRVTAPTYDGGLGFNYKWNMGWMNDILTYMETPPEHRKYVHNKVTFSLL--YAYSENFIL-PFSHDEVVHGKKSLLSKMPGTYEE 439          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_RHIRD (1,4-alpha-glucan-branching enzyme OS=Rhizobium radiobacter GN=glgB PE=3 SV=2)

HSP 1 Score: 83.9593 bits (206), Expect = 1.320e-15
Identity = 41/142 (28.87%), Postives = 81/142 (57.04%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDAL---LYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P++GFH  W T ++ +  ++V+ +L++N  +W  ++ +DG +  +++SM+Y    ++   G  E   N+Y  ++ L    +L   N +++  HP ++TIAE++T +P + +P  +GGLGF +  N+      LS+    P H
Sbjct:  374 PRQGFHPDWNTAIYNFGRIEVMSYLINNALYWAEKFHLDGLRVDAVASMLYLD--YSRKEG--EWIPNEYGGRENLESVRFLQKMNSLVYGTHPGVMTIAEESTSWPKVSQPVHEGGLGFGFKWNMGFMHDTLSYFSREPVH 511          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_AGRT5 (1,4-alpha-glucan-branching enzyme OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=glgB PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 1.320e-15
Identity = 41/142 (28.87%), Postives = 81/142 (57.04%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKDAL---LYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P++GFH  W T ++ +  ++V+ +L++N  +W  ++ +DG +  +++SM+Y    ++   G  E   N+Y  ++ L    +L   N +++  HP ++TIAE++T +P + +P  +GGLGF +  N+      LS+    P H
Sbjct:  375 PRQGFHPDWNTAIYNFGRIEVMSYLINNALYWAEKFHLDGLRVDAVASMLYLD--YSRKEG--EWIPNEYGGRENLESVRFLQKMNSLVYGTHPGVMTIAEESTSWPKVSQPVHEGGLGFGFKWNMGFMHDTLSYFSREPVH 512          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_RUBXD (1,4-alpha-glucan-branching enzyme OS=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) GN=glgB PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.724e-15
Identity = 46/142 (32.39%), Postives = 80/142 (56.34%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDL---EEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P++G H  WGT ++ Y   +V +FL+SN  +W+ EY IDG +  +++SM+Y    ++   G+    E   N+  + +A+ +L   NE+++   P   T+AE++T +P +  PT  GGLGF Y  N+      L +++  P H
Sbjct:  358 PRKGRHPDWGTLIYNYGRNEVRNFLISNALFWLDEYHIDGLRVDAVASMLYL--DYSRKEGEWVPNEHGGNE--NLEAIAFLRRMNEVVYGEAPGAFTVAEESTAWPMVSRPTYMGGLGFGYKWNMGWMHDTLQYMKEDPVH 495          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_TRIEI (1,4-alpha-glucan-branching enzyme OS=Trichodesmium erythraeum (strain IMS101) GN=glgB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.252e-15
Identity = 48/140 (34.29%), Postives = 79/140 (56.43%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P++G HK WGT +F Y   +V +FL +N  +W  +Y IDG +  +++SM+Y HN    +  D E   N+Y      +A  +L   N +L + +P +++IAE++T +P +  PT  GGLGF++  N+      L + E  P
Sbjct:  388 PRKGEHKQWGTLVFDYGRNEVRNFLAANALFWFDKYHIDGVRVDAVASMVY-HN---YMRPDGEWVANKYGGVEYIEAADFLRQVNHLLFSYYPGVLSIAEESTSWPMVTWPTYVGGLGFNFKWNMGWMHDMLDYFEMDP 523          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PHOPR (1,4-alpha-glucan-branching enzyme OS=Photobacterium profundum GN=glgB PE=3 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.252e-15
Identity = 53/192 (27.60%), Postives = 95/192 (49.48%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK--------DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+RG+H+ W + ++ Y    V  FL+SN  +W+  Y IDG +  +++SM+Y          D     +Q++          DA+  L   NE +++ +PN +TIAE++T + G+  PT  GGLGF +  N+      LS+++  P H       ++            ++YA + N  +S  H   E+++G+
Sbjct:  351 PRRGWHQDWKSYIYDYGRDHVRRFLISNALFWLEHYHIDGLRVDAVASMLYL---------DYSREHDQWIPNHDGGNQNYDAISLLRWMNEEVYSHYPNAMTIAEESTAFSGVSRPTDMGGLGFGFKWNMGWMHDSLSYIQEEPVHRKFHHNTITF----------PLIYAFSENYVLSLSHD--EVVYGK 521          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PSEU2 (1,4-alpha-glucan-branching enzyme OS=Pseudomonas syringae pv. syringae (strain B728a) GN=glgB PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.941e-15
Identity = 54/188 (28.72%), Postives = 102/188 (54.26%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKD---ALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            PK GFH+ W T ++     +V  F+L++   W+  Y IDG +  +++SM+Y    ++   G  E   N++  ++   A+ +L   N+++    P  + IAE++T +PG+ EPT QGGLGF+Y  N+      L ++E  P +      K+  +LV    +S++ ++   +H++ + G HS  + + G+
Sbjct:  377 PKEGFHQDWNTLIYNLGRTEVHGFMLASALHWLKHYHIDGLRVDAVASMLY--RDYSRNAG--EWVTNRFGGRENLEAIDFLRHLNDVVALEAPGTMVIAEESTAWPGVSEPTQQGGLGFNYKWNMGWMHDSLQYMEEDPINRGHHHGKLSFSLV--YAWSERFVL-PISHDEVVHGKHSLIDKMPGD 557          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_VIBF1 (1,4-alpha-glucan-branching enzyme OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=glgB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 53/186 (28.49%), Postives = 100/186 (53.76%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P+RG+H  W + ++ YD   V  FL+SN  +W   + IDG +  +++SM+Y    ++   G+ +  +     +  A+  L   NE +++ +PN +TIAE++T +PG+  PT  GGLGF +  N+      L+++   P H ++    I   LV    +S+  I+ + +H++ + G  S  + + G+
Sbjct:  353 PRRGWHNDWQSFIYNYDQPHVREFLVSNALYWFEHFHIDGLRVDAVASMLYLD--YSRNDGEWIPNWEGGNHNHGAIALLKWMNEEVYSHYPNAMTIAEESTAFPGVSAPTFAGGLGFGFKWNMGWMHDSLNYIREDPIHRKYHHDTITFPLV--YAFSENFIL-SLSHDEVVYGKGSILDKMPGD 533          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SHESM (1,4-alpha-glucan-branching enzyme OS=Shewanella sp. (strain MR-4) GN=glgB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 54/186 (29.03%), Postives = 101/186 (54.30%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            P++G H  W T ++ YD  +V  FLLSN  +W+ E+ +DG +  ++SSM+Y    ++   G  L        + +A+ +L + N+ L+   P I  IAE++T + G+ +PT  GGLGF +  N+      LS+L   P + ++  +++  +L+    YS++  M + +H++ + G  S    + G+
Sbjct:  373 PRKGTHPDWDTLIYNYDRGEVRSFLLSNACYWLREFHLDGLRLDAVSSMLYL--DYSREPGQWLPNAYGGRENLEAIHFLQMLNQRLYQAFPGICMIAEESTAFAGVTKPTDSGGLGFGFKWNMGWMNDSLSYLGRDPIYRQYHHNQLTFSLM--YAYSEQ-FMLSISHDEVVHGKGSLLHKIPGD 553          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_NITEU (1,4-alpha-glucan-branching enzyme OS=Nitrosomonas europaea GN=glgB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 43/140 (30.71%), Postives = 78/140 (55.71%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+ G+H  WGT +F Y   +V  FLLS+ ++W+  + IDG +  +++SM+Y +  ++   G+ L      + + +A+ +L   N ++H   P  +T AE++T +P +  P   GGLGF    N+      LS++++ P H
Sbjct:  370 PRLGYHHDWGTYIFNYGRNEVKSFLLSSAHYWLSAFHIDGLRVDAVASMLYLN--YSRKEGEWLPNRYGGHENLEAIEFLRALNTMVHGEFPGALTFAEESTSWPAVSRPAYLGGLGFSMKWNMGWMNDTLSYMQHDPVH 507          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_BACST1.011e-1531.111,4-alpha-glucan-branching enzyme OS=Bacillus stea... [more]
GLGB_RHIRD1.320e-1528.871,4-alpha-glucan-branching enzyme OS=Rhizobium rad... [more]
GLGB_AGRT51.320e-1528.871,4-alpha-glucan-branching enzyme OS=Agrobacterium... [more]
GLGB_RUBXD1.724e-1532.391,4-alpha-glucan-branching enzyme OS=Rubrobacter x... [more]
GLGB_TRIEI2.252e-1534.291,4-alpha-glucan-branching enzyme OS=Trichodesmium... [more]
GLGB_PHOPR2.252e-1527.601,4-alpha-glucan-branching enzyme OS=Photobacteriu... [more]
GLGB_PSEU22.941e-1528.721,4-alpha-glucan-branching enzyme OS=Pseudomonas s... [more]
GLGB_VIBF13.842e-1528.491,4-alpha-glucan-branching enzyme OS=Vibrio fische... [more]
GLGB_SHESM3.842e-1529.031,4-alpha-glucan-branching enzyme OS=Shewanella sp... [more]
GLGB_NITEU3.842e-1530.711,4-alpha-glucan-branching enzyme OS=Nitrosomonas ... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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