EY735685

Overview
NameEY735685
Unique NameEY735685
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange fruit, development stadium (6 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_DESVV (1,4-alpha-glucan-branching enzyme OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=glgB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 46/140 (32.86%), Postives = 75/140 (53.57%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+ G H  WGT +F Y   +V +FL +N  +W+ E+ IDG +  +++SM+Y    ++   G  L        + DA+ +L   N ++HA  P  +T+AE++T +PG+  P   GGLGF +  N+      L +L   P H
Sbjct:  274 PRLGEHPDWGTYIFNYGRNEVRNFLTANALYWLREFHIDGLRMDAVASMLYLD--YSREAGQWLPNRHGGRENLDAVDFLREVNTVIHAEFPGAMTLAEESTAWPGVSRPVYTGGLGFSFKWNMGWMHDTLGYLAEDPIH 411          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_DESVH (1,4-alpha-glucan-branching enzyme OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=glgB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 46/140 (32.86%), Postives = 75/140 (53.57%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            P+ G H  WGT +F Y   +V +FL +N  +W+ E+ IDG +  +++SM+Y    ++   G  L        + DA+ +L   N ++HA  P  +T+AE++T +PG+  P   GGLGF +  N+      L +L   P H
Sbjct:  274 PRLGEHPDWGTYIFNYGRNEVRNFLTANALYWLREFHIDGLRMDAVASMLYLD--YSREAGQWLPNRHGGRENLDAVDFLREVNTVIHAEFPGAMTLAEESTAWPGVSRPVYTGGLGFSFKWNMGWMHDTLGYLAEDPIH 411          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_CORGL (1,4-alpha-glucan-branching enzyme OS=Corynebacterium glutamicum GN=glgB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 55/187 (29.41%), Postives = 101/187 (54.01%), Query Frame = 2
Query:   11 KRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKD---ALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHE-WSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            +RG  K WGT +F +   +V +FL++N  +W+ E+ IDG +  +++SM+Y    ++   G+ E   N Y  ++   A+ +L   N  +  LHP  +TIAE++T +PG+  PT  GGLGF    N+      L +    P H  +  S++  +LV    +S++ ++   +H++ + G  S  + + G+
Sbjct:  366 RRGEQKDWGTLVFDFGRNEVRNFLVANALYWIEEFHIDGLRVDAVASMLYLD--YSREHGEWEP--NIYGGRENLEAVQFLQEMNATVLRLHPGALTIAEESTSWPGVTAPTWDGGLGFSLKWNMGWMHDTLEYFSKNPVHRAFHHSELTFSLV--YAFSERFVL-PISHDEVVHGKGSLWDRMPGD 545          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ACTSZ (1,4-alpha-glucan-branching enzyme OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=glgB PE=3 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.842e-15
Identity = 53/188 (28.19%), Postives = 101/188 (53.72%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDK---DALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH-EWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISGGHSFAEILFGE 559
            PK G+H+ W T ++ Y   +V ++L  N  +WV  + +DG +  +++SMIY          D E   NQY  +   +A+ +L   N IL   HP ++ +AE++T + G+  P   GGLGF++  N+      LS+++  P + +++ SK+   ++   QYS+  ++   +H++ + G  S  + + G+
Sbjct:  362 PKEGYHQDWNTLIYNYGRHEVKNYLSGNALYWVERFGLDGIRVDAVASMIYRDYS----RRDGEWIPNQYGGRENLEAIEFLKHTNYILGTEHPGVMCVAEESTAFAGVTLPPENGGLGFNFKWNMGWMNDTLSYMKLDPIYRQYNHSKLTFGML--YQYSENFVL-PLSHDEVVHGKCSLLDKMPGD 542          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SYNS3 (1,4-alpha-glucan-branching enzyme OS=Synechococcus sp. (strain CC9311) GN=glgB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 47/140 (33.57%), Postives = 78/140 (55.71%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQY---VDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP 418
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y       L  D E   N++    + +A+ +L  AN +L    P  ++IAE++T +P + +PT  GGLGF+   N+      L + E  P
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLVFWFDQFHIDGIRVDAVASMLYRD----YLRPDGEWLANEHGGRENTEAVRFLQQANHVLFEHFPGALSIAEESTTWPMVTQPTENGGLGFNLKWNMGWMHDMLDYFELDP 523          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PROMP (1,4-alpha-glucan-branching enzyme OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=glgB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 52/175 (29.71%), Postives = 94/175 (53.71%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISG 526
            P+ G HK WGT +F Y   +V +FL++NL +W  E+ IDG +  +++SM+Y    +    G+ +        + +A+ +L  AN +L    P  ++IAE++T +P + EPT  GGLGF+   N+      L + E  P   ++  + +  ++  N  Y++   M A +H++ + G
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLIYWFEEFHIDGIRVDAVASMLY--RDYLRPEGEWIPNENGGNENLEAVKFLQQANHVLFQHFPGALSIAEESTTWPMVTEPTNVGGLGFNLKWNMGWMHDMLDYFEIDPWFRQFHQNSVTFSITYN--YTEN-FMLALSHDEVVHG 557          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PROM5 (1,4-alpha-glucan-branching enzyme OS=Prochlorococcus marinus (strain MIT 9515) GN=glgB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 52/175 (29.71%), Postives = 94/175 (53.71%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISG 526
            P+ G HK WGT +F Y   +V +FL++NL +W  E+ IDG +  +++SM+Y    +    G+ +        + +A+ +L  AN +L    P  ++IAE++T +P + EPT  GGLGF+   N+      L + E  P   ++  + +  ++  N  Y++   M A +H++ + G
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLIYWFEEFHIDGIRVDAVASMLY--RDYLRPEGEWIPNENGGNENLEAVKFLQQANHVLFQHFPGALSIAEESTTWPMVTEPTNVGGLGFNLKWNMGWMHDMLDYFEIDPWFRQFHQNSVTFSITYN--YTEN-FMLALSHDEVVHG 557          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_PROM4 (1,4-alpha-glucan-branching enzyme OS=Prochlorococcus marinus (strain MIT 9211) GN=glgB PE=3 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 53/177 (29.94%), Postives = 96/177 (54.24%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDL---EEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTP-DHEWSMSKIVSTLVGNGQYSDKMIMYAENHNQCISG 526
            P+ G HK WGT +F Y   +V +FL++NL +W  ++ IDG +  +++SM+Y    +    G     E+  N+  + +A+ +L  AN +L    P  ++IAE++T +PG+  PT  GGLGF+   N+      L + E  P   ++  + +  ++  N  Y++   M A +H++ + G
Sbjct:  388 PRIGEHKEWGTLIFNYSRNEVRNFLVANLVFWFEQFHIDGIRVDAVASMLY--KDYLRPEGQWIPNEDGGNE--NTEAVKFLQQANHVLFEHFPGALSIAEESTTWPGVTNPTDVGGLGFNLKWNMGWMHDMLDYFEVDPWFRQFHQNNVTFSITYN--YTEN-FMLALSHDEVVHG 557          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_ERWCH (1,4-alpha-glucan-branching enzyme OS=Erwinia chrysanthemi GN=glgB PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.017e-15
Identity = 51/189 (26.98%), Postives = 97/189 (51.32%), Query Frame = 2
Query:    8 PKRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGD-LEEYCNQYVDKDALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDHEWSMSKIVSTLVGNGQ---YSDKMIMYAENHNQCISGGHSFAEILFGEI 562
            PK G+H+ W T ++ +D  +V ++L  N  +W   + +DG +  +++SMIY    ++   G+ +  Y     + +A+ +L   N++L   H   +TIAE++T Y G+  P   GGLGF Y  N+      L++++  P H     K    L+  G    YS+  ++   +H++ + G  S  + + G++
Sbjct:  366 PKEGYHQDWNTLIYNFDRHEVRNYLAGNALYWTERFGVDGLRVDAVASMIY--RDYSRRDGEWVPNYFGGKENLEAIGFLRYTNQMLGQHHAGAVTIAEESTDYAGVTLPPEHGGLGFHYKWNMGWMHDSLAYMQLDPVHR----KYHHDLLTFGMLYAYSENFVL-PLSHDEVVHGKRSLLDRMPGDV 547          
BLAST of EY735685 vs. ExPASy Swiss-Prot
Match: GLGB_SACD2 (1,4-alpha-glucan-branching enzyme OS=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=glgB PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 6.553e-15
Identity = 45/141 (31.91%), Postives = 77/141 (54.61%), Query Frame = 2
Query:   11 KRGFHKYWGTRMFIYDDLDVLHFLLSNLNWWVVEYQIDGFQFHSLSSMIYTHNGFASLTGDLEEYCNQYVDKD---ALLYLILANEILHALHPNIITIAEDATYYPGLCEPTTQGGLGFDYFLNLSASEMWLSFLENTPDH 424
            ++GFH  W T ++ Y   +V  FL++N  +W+ +Y IDG +  +++SM+Y          D E   N Y  ++   A+ +L L NE ++   P+ + +AE++T +PG+  PT+ GGLGF Y  N+      L ++   P H
Sbjct:  367 RQGFHPDWNTYIYNYGRHEVKSFLMANALFWLEQYHIDGLRVDAVASMLYLDYS----RKDGEWLPNSYGGRENLEAIDFLRLVNERVYKRFPHAMMVAEESTAWPGVSSPTSCGGLGFGYKWNMGWMNDSLQYISKEPIH 503          
The following BLAST results are available for this feature:
BLAST of EY735685 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 255
Match NameE-valueIdentityDescription
GLGB_DESVV3.842e-1532.861,4-alpha-glucan-branching enzyme OS=Desulfovibrio... [more]
GLGB_DESVH3.842e-1532.861,4-alpha-glucan-branching enzyme OS=Desulfovibrio... [more]
GLGB_CORGL3.842e-1529.411,4-alpha-glucan-branching enzyme OS=Corynebacteri... [more]
GLGB_ACTSZ3.842e-1528.191,4-alpha-glucan-branching enzyme OS=Actinobacillu... [more]
GLGB_SYNS35.017e-1533.571,4-alpha-glucan-branching enzyme OS=Synechococcus... [more]
GLGB_PROMP5.017e-1529.711,4-alpha-glucan-branching enzyme OS=Prochlorococc... [more]
GLGB_PROM55.017e-1529.711,4-alpha-glucan-branching enzyme OS=Prochlorococc... [more]
GLGB_PROM45.017e-1529.941,4-alpha-glucan-branching enzyme OS=Prochlorococc... [more]
GLGB_ERWCH5.017e-1526.981,4-alpha-glucan-branching enzyme OS=Erwinia chrys... [more]
GLGB_SACD26.553e-1531.911,4-alpha-glucan-branching enzyme OS=Saccharophagu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-705-003-F11-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY735685 ID=EY735685; Name=EY735685; organism=Citrus sinensis; type=EST; length=901bp
CACGCGTCCGAAACGAGGTTTTCACAAATATTGGGGAACCAGGATGTTCA
TATATGATGACCTTGATGTGCTACATTTTCTCCTTTCAAATCTGAATTGG
TGGGTTGTGGAATATCAGATTGACGGTTTTCAGTTCCATTCCCTCTCATC
AATGATATATACGCACAATGGTTTTGCTTCTTTAACGGGTGACTTGGAGG
AGTACTGCAATCAGTATGTTGACAAGGATGCATTATTATATCTTATTTTG
GCAAATGAGATACTGCATGCTCTTCATCCAAATATTATAACAATTGCTGA
AGATGCAACATATTATCCTGGACTATGTGAACCAACTACTCAAGGCGGAT
TGGGATTTGATTATTTTCTCAATCTTTCTGCATCAGAGATGTGGTTGTCG
TTTCTTGAGAATACTCCTGATCACGAATGGAGCATGAGCAAGATTGTCAG
CACATTAGTGGGCAATGGGCAATATTCCGATAAGATGATTATGTATGCCG
AAAACCATAATCAGTGCATATCTGGAGGGCATTCATTTGCAGAGATATTG
TTTGGTGAAATCTCAGAGCATTCTCCTGAGCCAACTAATTGGTTGGCGCA
CAGGGCGTCCCCGGCCCCACATGGACCCGATTGAGGCCCTTGACTCGGCG
GCTGGGTCTGTGGGATGACCAATTAGACTGGGCAACAGAATGTCGGGCTG
GCGGAAGAGGGGAAAGGTGCGCAGGGGGAGGGGGAGGGGGAATTGATTTC
CCCCCCCCCAGCGCGACCCGGAAAAGGGGCAGCGAAGCCGGGGCGGCGGT
CGCCGGCCGGCGCCGCGGAGGCGGGCGCGCACCGGCTCGGGTGCCCGGGC
CCGGCGCCCCCGCCCCCAGGCGACCACGCGTGGAGGCTGGTCGCGAGGGC
G
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